RNA–Protein interactions for RNA: ENST00000511044.1

PCDH1-206, Transcript of protocadherin 1, humanhuman

TSL 1 (best)

Gene PCDH1, Length 2,674 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-206ENST00000511044 H3BQ85 93 aa7.59□□□□□ -1.19
PCDH1-206ENST00000511044 LELP1Q5T871 98 aa7.57□□□□□ -1.2
PCDH1-206ENST00000511044 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
PCDH1-206ENST00000511044 J3QL48 77 aa7.56□□□□□ -1.2
PCDH1-206ENST00000511044 COX7BP24311 80 aa7.56□□□□□ -1.2
PCDH1-206ENST00000511044 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
PCDH1-206ENST00000511044 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
PCDH1-206ENST00000511044 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
PCDH1-206ENST00000511044 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
PCDH1-206ENST00000511044 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
PCDH1-206ENST00000511044 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
PCDH1-206ENST00000511044 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
PCDH1-206ENST00000511044 GVQW2A0A096LPI5 108 aaPredicted RBP7.53□□□□□ -1.2
PCDH1-206ENST00000511044 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
PCDH1-206ENST00000511044 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
PCDH1-206ENST00000511044 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
PCDH1-206ENST00000511044 KPRPQ5T749 579 aaPredicted RBP7.51□□□□□ -1.21
PCDH1-206ENST00000511044 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
PCDH1-206ENST00000511044 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
PCDH1-206ENST00000511044 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
PCDH1-206ENST00000511044 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
PCDH1-206ENST00000511044 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
PCDH1-206ENST00000511044 LOC101927531A0A1B0GV80 90 aa7.49□□□□□ -1.21
PCDH1-206ENST00000511044 PRR4Q16378 134 aa7.49□□□□□ -1.21
PCDH1-206ENST00000511044 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
PCDH1-206ENST00000511044 A0A087X002 238 aa7.48□□□□□ -1.21
PCDH1-206ENST00000511044 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
PCDH1-206ENST00000511044 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
PCDH1-206ENST00000511044 LCE6AA0A183 80 aa7.46□□□□□ -1.21
PCDH1-206ENST00000511044 DEFB131BA0A096LNP1 70 aa7.46□□□□□ -1.22
PCDH1-206ENST00000511044 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
PCDH1-206ENST00000511044 LINC00528Q8N1L1 170 aa7.44□□□□□ -1.22
PCDH1-206ENST00000511044 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
PCDH1-206ENST00000511044 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
PCDH1-206ENST00000511044 TNP2Q05952 138 aa7.43□□□□□ -1.22
PCDH1-206ENST00000511044 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.43□□□□□ -1.22
PCDH1-206ENST00000511044 DEFB105AQ8NG35 78 aa7.42□□□□□ -1.22
PCDH1-206ENST00000511044 B9D2Q9BPU9 175 aa7.42□□□□□ -1.22
PCDH1-206ENST00000511044 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
PCDH1-206ENST00000511044 ETDCA0A1B0GVM5 59 aa7.42□□□□□ -1.22
PCDH1-206ENST00000511044 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
PCDH1-206ENST00000511044 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
PCDH1-206ENST00000511044 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
PCDH1-206ENST00000511044 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
PCDH1-206ENST00000511044 CDK2AP2O75956 126 aa7.4□□□□□ -1.23
PCDH1-206ENST00000511044 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
PCDH1-206ENST00000511044 ROMO1P60602 79 aa7.38□□□□□ -1.23
PCDH1-206ENST00000511044 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
PCDH1-206ENST00000511044 KMT2AQ03164 3969 aa7.36□□□□□ -1.23
PCDH1-206ENST00000511044 K7EQZ3 153 aa7.36□□□□□ -1.23
PCDH1-206ENST00000511044 H3BNG1 76 aa7.35□□□□□ -1.23
PCDH1-206ENST00000511044 Q8N377 158 aa7.35□□□□□ -1.23
PCDH1-206ENST00000511044 A0A1W2PNM2 257 aa7.35□□□□□ -1.23
PCDH1-206ENST00000511044 DSCR10P59022 87 aa7.35□□□□□ -1.23
PCDH1-206ENST00000511044 KCNQ1DNQ9H478 68 aa7.35□□□□□ -1.23
PCDH1-206ENST00000511044 IGLV5-48A0A075B6I7 105 aa7.34□□□□□ -1.23
PCDH1-206ENST00000511044 NDUFB1O75438 58 aa7.34□□□□□ -1.23
PCDH1-206ENST00000511044 C7orf33Q8WU49 177 aa7.34□□□□□ -1.23
PCDH1-206ENST00000511044 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.24
PCDH1-206ENST00000511044 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
PCDH1-206ENST00000511044 Q9BRP9 147 aa7.33□□□□□ -1.24
PCDH1-206ENST00000511044 DYNC2H1Q8NCM8 4307 aaKnown RBP7.31□□□□□ -1.24
PCDH1-206ENST00000511044 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
PCDH1-206ENST00000511044 RTL8CO15255 209 aa7.31□□□□□ -1.24
PCDH1-206ENST00000511044 C1orf137Q5JT78 98 aa7.31□□□□□ -1.24
PCDH1-206ENST00000511044 A0A1B0GW54 56 aa7.3□□□□□ -1.24
PCDH1-206ENST00000511044 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
PCDH1-206ENST00000511044 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
PCDH1-206ENST00000511044 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
PCDH1-206ENST00000511044 IGLV9-49A0A0B4J1Y8 123 aa7.29□□□□□ -1.24
PCDH1-206ENST00000511044 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
PCDH1-206ENST00000511044 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
PCDH1-206ENST00000511044 Q6ZRX8 168 aa7.29□□□□□ -1.24
PCDH1-206ENST00000511044 Q8NBF4 154 aa7.29□□□□□ -1.24
PCDH1-206ENST00000511044 REG3GQ6UW15 175 aa7.28□□□□□ -1.24
PCDH1-206ENST00000511044 WFDC13Q8IUB5 93 aa7.27□□□□□ -1.25
PCDH1-206ENST00000511044 IGLV1-50A0A075B6I6 118 aa7.26□□□□□ -1.25
PCDH1-206ENST00000511044 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
PCDH1-206ENST00000511044 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
PCDH1-206ENST00000511044 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
PCDH1-206ENST00000511044 Q6ZR54 194 aa7.25□□□□□ -1.25
PCDH1-206ENST00000511044 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
PCDH1-206ENST00000511044 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
PCDH1-206ENST00000511044 VPS13DQ5THJ4 4388 aa7.24□□□□□ -1.25
PCDH1-206ENST00000511044 DNAH10OSP0CZ25 163 aa7.24□□□□□ -1.25
PCDH1-206ENST00000511044 SPINK7P58062 85 aa7.24□□□□□ -1.25
PCDH1-206ENST00000511044 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
PCDH1-206ENST00000511044 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 PLAC8Q9NZF1 115 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 SPRR1AP35321 89 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 KRTAP1-5Q9BYS1 174 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
PCDH1-206ENST00000511044 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
PCDH1-206ENST00000511044 IGLV5-37A0A075B6J1 123 aa7.21□□□□□ -1.26
PCDH1-206ENST00000511044 H0Y9P7 68 aa7.2□□□□□ -1.26
PCDH1-206ENST00000511044 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
PCDH1-206ENST00000511044 NUPR2A6NF83 97 aa7.2□□□□□ -1.26
PCDH1-206ENST00000511044 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms