RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 KRTAP13-2Q52LG2 175 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 C9orf116Q5BN46 136 aaPredicted RBP1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 C1orf134Q5TEV5 83 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 IGFL1Q6UW32 110 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 SOSTDC1Q6X4U4 206 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 TEN1Q86WV5 123 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 ANKRD29Q8N6D5 301 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC00337Q8N6G1 96 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 SMIM11BQ8TCY0 68 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 DIRC1Q969H9 104 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 DPH3Q96FX2 82 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC01600Q96MT4 127 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 NAA38Q9BRA0 125 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 XAGE1AQ9HD64 81 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 SORL1Q92673 2214 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 hADV29S1A0JD25 119 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 NCR3O14931 201 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 ZNF73O43830 326 aaPredicted RBP1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 LY6G6CO95867 125 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 ACYP1P07311 99 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 BAALC-AS2P0C853 105 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 PDE6GP18545 87 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 COX7BP24311 80 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 PRR3P79522 188 aaKnown RBP1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 WFDC2Q14508 124 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 C6orf99Q4VX62 202 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 MRPL55Q7Z7F7 128 aaKnown RBP1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 Q8N814 137 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 C9orf163Q8N9P6 203 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 PPDPFLQ8WWR9 84 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC00526Q96FQ7 95 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 KCNQ1DNQ9H478 68 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 ORMDL1Q9P0S3 153 aa1.36□□□□□ -2.19
TOPBP1-205ENST00000506779 TENM2Q9NT68 2774 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 IGLV1-50A0A075B6I6 118 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 A0A087WTM6 91 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 TRBV10-3A0A0K0K1G6 114 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 A0A0U1RQV1 116 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 LECT2O14960 151 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 ELOF1P60002 83 aaKnown RBP1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 ETDBQ3ZM63 59 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 SDIM1Q6ZPB5 146 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 CLEC2BQ92478 149 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 DSCR8Q96T75 97 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 VWFP04275 2813 aa1.35□□□□□ -2.19
TOPBP1-205ENST00000506779 STAB2Q8WWQ8 2551 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 IGKV2-24A0A0C4DH68 120 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 FAM240AA0A1B0GVK7 77 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 A0A1B0GW54 56 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 M0R2N4 97 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 SPRR1AP35321 89 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 UBE2BP63146 152 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 RBM3P98179 157 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 Q6ZRX8 168 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC00336Q6ZUF6 198 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 VPS25Q9BRG1 176 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 LAMTOR3Q9UHA4 124 aa1.34□□□□□ -2.19
TOPBP1-205ENST00000506779 HYDINQ4G0P3 5121 aa1.34□□□□□ -2.2
TOPBP1-205ENST00000506779 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.2
TOPBP1-205ENST00000506779 A0A096LNI7 61 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 TEX49A0A1B0GTD5 131 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 F8WEM9 126 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 BCE1O60756 84 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 Q6ZQY7 126 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 FAM19A5Q7Z5A7 132 aaPredicted RBP1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 FAM19A1Q7Z5A9 133 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 SPACA4Q8TDM5 124 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 OBSCN-AS1Q96MR7 158 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 SIGMAR1Q99720 223 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 ZNF706Q9Y5V0 76 aaPredicted RBP1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 TRRAPQ9Y4A5 3859 aa1.33□□□□□ -2.2
TOPBP1-205ENST00000506779 IGLV5-48A0A075B6I7 105 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 LOC110117498A0A087WWA1 95 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 LCE6AA0A183 80 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 A8MUU9 505 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 BPY2O14599 106 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 CCKP06307 115 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 FUSP35637 526 aaKnown RBP eCLIP1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 LINC00643Q86TS7 51 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 Q8NDZ9 215 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 CIRBP-AS1Q8TBR5 109 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 UBL5Q9BZL1 73 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 IMUPQ9GZP8 106 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 PLAC8Q9NZF1 115 aa1.32□□□□□ -2.2
TOPBP1-205ENST00000506779 A0A1W2PNN7 141 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 SCGB1A1P11684 91 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 RPL37AP61513 92 aaKnown RBP1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 ATP5EP2Q5VTU8 51 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 Q6JHZ5 121 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 DEFB105AQ8NG35 78 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 SMCR5Q8TEV8 140 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 HIGD2AQ9BW72 106 aa1.31□□□□□ -2.2
TOPBP1-205ENST00000506779 C14orf132Q9NPU4 83 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms