RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.39□□□□□ -2.35
GYPA-204ENST00000504786 MAST4O15021 2626 aa0.39□□□□□ -2.35
GYPA-204ENST00000504786 USF3Q68DE3 2245 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 PTPRQQ9UMZ3 2332 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 LMO7Q8WWI1 1683 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 LYNX1G3V0Z9 82 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 H0YGX0 51 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 CRIP1P50238 77 aa0.38□□□□□ -2.35
GYPA-204ENST00000504786 SAMD9LQ8IVG5 1584 aa0.37□□□□□ -2.35
GYPA-204ENST00000504786 H0YAA0 97 aa0.37□□□□□ -2.35
GYPA-204ENST00000504786 CDKN2A-AS1Q9UH64 79 aa0.37□□□□□ -2.35
GYPA-204ENST00000504786 MUC5BQ9HC84 5762 aaPredicted RBP0.37□□□□□ -2.35
GYPA-204ENST00000504786 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 KIF21BO75037 1637 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 NDUFA3O95167 84 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 LINC00158P58513 81 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 PRO3102Q9H379 93 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 TMEM167BQ9NRX6 74 aa0.36□□□□□ -2.35
GYPA-204ENST00000504786 SPRR1BP22528 89 aa0.35□□□□□ -2.35
GYPA-204ENST00000504786 LELP1Q5T871 98 aa0.35□□□□□ -2.35
GYPA-204ENST00000504786 DUOX1Q9NRD9 1551 aa0.35□□□□□ -2.35
GYPA-204ENST00000504786 PKDREJQ9NTG1 2253 aa0.35□□□□□ -2.35
GYPA-204ENST00000504786 GCC2Q8IWJ2 1684 aa0.34□□□□□ -2.35
GYPA-204ENST00000504786 CSMD3Q7Z407 3707 aa0.34□□□□□ -2.35
GYPA-204ENST00000504786 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 H1FX-AS1Q4G0G2 97 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 MINOS1Q5TGZ0 78 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 WFDC13Q8IUB5 93 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 DEFB105AQ8NG35 78 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 LINC00308Q8TCZ7 52 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
GYPA-204ENST00000504786 MROH2BQ7Z745 1585 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 SPINK4O60575 86 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 IAPPP10997 89 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 RPS27P42677 84 aaKnown RBP0.33□□□□□ -2.36
GYPA-204ENST00000504786 RPS27LQ71UM5 84 aaKnown RBP0.33□□□□□ -2.36
GYPA-204ENST00000504786 C6orf48Q9UBA6 75 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 TIMM8BQ9Y5J9 83 aaPredicted RBP0.33□□□□□ -2.36
GYPA-204ENST00000504786 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
GYPA-204ENST00000504786 CLTCL1P53675 1640 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 REV3LO60673 3130 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
GYPA-204ENST00000504786 KNL1Q8NG31 2342 aa0.32□□□□□ -2.36
GYPA-204ENST00000504786 DEFB130BP0DP73 79 aa0.32□□□□□ -2.36
GYPA-204ENST00000504786 DEFB130AP0DP74 79 aa0.32□□□□□ -2.36
GYPA-204ENST00000504786 SNRPGP62308 76 aaKnown RBP0.32□□□□□ -2.36
GYPA-204ENST00000504786 SMIM2Q9BVW6 85 aa0.32□□□□□ -2.36
GYPA-204ENST00000504786 NCOR2Q9Y618 2525 aa0.32□□□□□ -2.36
GYPA-204ENST00000504786 SPTBN1Q01082 2364 aaKnown RBP0.32□□□□□ -2.36
GYPA-204ENST00000504786 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
GYPA-204ENST00000504786 NDUFA1O15239 70 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 WT1-ASQ06250 92 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 TFF3Q07654 80 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 KLK9Q2XQG4 91 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 AKAP6Q13023 2319 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 PDE4DIPQ5VU43 2346 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 CSPG4Q6UVK1 2322 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 PCNX1Q96RV3 2341 aa0.31□□□□□ -2.36
GYPA-204ENST00000504786 IGSF10Q6WRI0 2623 aa0.3□□□□□ -2.36
GYPA-204ENST00000504786 GPR98Q8WXG9 6306 aa0.3□□□□□ -2.36
GYPA-204ENST00000504786 H3BUA1 57 aa0.3□□□□□ -2.36
GYPA-204ENST00000504786 CELSR1Q9NYQ6 3014 aa0.3□□□□□ -2.36
GYPA-204ENST00000504786 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
GYPA-204ENST00000504786 S4R3F8 94 aa0.29□□□□□ -2.36
GYPA-204ENST00000504786 GVINP1Q7Z2Y8 2422 aa0.29□□□□□ -2.36
GYPA-204ENST00000504786 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
GYPA-204ENST00000504786 BSNQ9UPA5 3926 aa0.28□□□□□ -2.36
GYPA-204ENST00000504786 A0A0C4DFX4 3053 aa0.28□□□□□ -2.36
GYPA-204ENST00000504786 DEFB131AP59861 70 aa0.28□□□□□ -2.36
GYPA-204ENST00000504786 WFDC10BQ8IUB3 73 aa0.28□□□□□ -2.36
GYPA-204ENST00000504786 ABCA2Q9BZC7 2435 aa0.28□□□□□ -2.36
GYPA-204ENST00000504786 NCOR1O75376 2440 aa0.27□□□□□ -2.37
GYPA-204ENST00000504786 VWFP04275 2813 aa0.27□□□□□ -2.37
GYPA-204ENST00000504786 MMP24-AS1A0A0U1RRL7 71 aa0.27□□□□□ -2.37
GYPA-204ENST00000504786 PRLHP81277 87 aa0.27□□□□□ -2.37
GYPA-204ENST00000504786 KAAG1Q9UBP8 84 aa0.27□□□□□ -2.37
GYPA-204ENST00000504786 DSPP15924 2871 aaKnown RBP0.26□□□□□ -2.37
GYPA-204ENST00000504786 PRRC2CQ9Y520 2896 aaKnown RBP0.26□□□□□ -2.37
GYPA-204ENST00000504786 POLR2KP53803 58 aaKnown RBP0.26□□□□□ -2.37
GYPA-204ENST00000504786 DEFB106AQ8N104 65 aa0.26□□□□□ -2.37
GYPA-204ENST00000504786 NOP10Q9NPE3 64 aaKnown RBP0.26□□□□□ -2.37
GYPA-204ENST00000504786 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 UBR5O95071 2799 aaPredicted RBP0.25□□□□□ -2.37
GYPA-204ENST00000504786 PRKDCP78527 4128 aaKnown RBP0.25□□□□□ -2.37
GYPA-204ENST00000504786 M0R2T5 61 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 DEFB135Q30KP9 77 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 TRANK1O15050 2925 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 TENM4Q6N022 2769 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 SPTA1P02549 2419 aa0.25□□□□□ -2.37
GYPA-204ENST00000504786 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
GYPA-204ENST00000504786 EP300Q09472 2414 aaPredicted RBP0.24□□□□□ -2.37
GYPA-204ENST00000504786 A8MTW9 85 aa0.24□□□□□ -2.37
GYPA-204ENST00000504786 H0YGG7 62 aa0.24□□□□□ -2.37
GYPA-204ENST00000504786 M0QY20 66 aa0.24□□□□□ -2.37
GYPA-204ENST00000504786 CEP290O15078 2479 aa0.24□□□□□ -2.37
GYPA-204ENST00000504786 HIVEP3Q5T1R4 2406 aa0.23□□□□□ -2.37
GYPA-204ENST00000504786 NBASA2RRP1 2371 aa0.23□□□□□ -2.37
GYPA-204ENST00000504786 RPL39P62891 51 aaKnown RBP0.23□□□□□ -2.37
GYPA-204ENST00000504786 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms