RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 MUC7Q8TAX7 377 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 DEFB131BA0A096LNP1 70 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 C3orf84H3BNL1 204 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 KRTAP26-1Q6PEX3 210 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
CLDND1-208ENST00000503004 CYP4F30PQ9H0H9 118 aa3.38□□□□□ -1.87
CLDND1-208ENST00000503004 HUWE1Q7Z6Z7 4374 aaKnown RBP3.37□□□□□ -1.87
CLDND1-208ENST00000503004 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 CDK2AP2O75956 126 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 GVQW2A0A096LPI5 108 aaPredicted RBP3.37□□□□□ -1.87
CLDND1-208ENST00000503004 LCE6AA0A183 80 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 MOBPQ13875 183 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
CLDND1-208ENST00000503004 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
CLDND1-208ENST00000503004 H3BNG1 76 aa3.36□□□□□ -1.87
CLDND1-208ENST00000503004 NKAPP1Q8N9T2 125 aa3.36□□□□□ -1.87
CLDND1-208ENST00000503004 DNAH1Q9P2D7 4330 aa3.35□□□□□ -1.87
CLDND1-208ENST00000503004 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
CLDND1-208ENST00000503004 LINC00313P59037 77 aa3.35□□□□□ -1.87
CLDND1-208ENST00000503004 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
CLDND1-208ENST00000503004 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
CLDND1-208ENST00000503004 SRRM2Q9UQ35 2752 aaKnown RBP3.35□□□□□ -1.87
CLDND1-208ENST00000503004 DNAH9Q9NYC9 4486 aa3.34□□□□□ -1.87
CLDND1-208ENST00000503004 A6NED7 52 aa3.34□□□□□ -1.87
CLDND1-208ENST00000503004 LINC01556Q5JQF7 62 aa3.34□□□□□ -1.87
CLDND1-208ENST00000503004 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
CLDND1-208ENST00000503004 LINC01554Q52M75 96 aa3.34□□□□□ -1.88
CLDND1-208ENST00000503004 CASC10Q5T4H9 136 aa3.34□□□□□ -1.88
CLDND1-208ENST00000503004 COX7BP24311 80 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 ELOF1P60002 83 aaKnown RBP3.33□□□□□ -1.88
CLDND1-208ENST00000503004 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 LIMD2Q9BT23 127 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 DNAH7Q8WXX0 4024 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.33□□□□□ -1.88
CLDND1-208ENST00000503004 PDE6GP18545 87 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 DEFB105AQ8NG35 78 aa3.33□□□□□ -1.88
CLDND1-208ENST00000503004 IGLV9-49A0A0B4J1Y8 123 aa3.32□□□□□ -1.88
CLDND1-208ENST00000503004 ST20-AS1Q8NBB2 130 aa3.32□□□□□ -1.88
CLDND1-208ENST00000503004 FAM168BA1KXE4 195 aa3.32□□□□□ -1.88
CLDND1-208ENST00000503004 DNAH10OSP0CZ25 163 aa3.32□□□□□ -1.88
CLDND1-208ENST00000503004 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
CLDND1-208ENST00000503004 RPL37AP8A6NKH3 93 aa3.31□□□□□ -1.88
CLDND1-208ENST00000503004 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
CLDND1-208ENST00000503004 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
CLDND1-208ENST00000503004 B9D2Q9BPU9 175 aa3.3□□□□□ -1.88
CLDND1-208ENST00000503004 K7EIL1 84 aa3.3□□□□□ -1.88
CLDND1-208ENST00000503004 PLECQ15149 4684 aaKnown RBP3.3□□□□□ -1.88
CLDND1-208ENST00000503004 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CLDND1-208ENST00000503004 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
CLDND1-208ENST00000503004 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
CLDND1-208ENST00000503004 KCNQ1DNQ9H478 68 aa3.29□□□□□ -1.88
CLDND1-208ENST00000503004 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
CLDND1-208ENST00000503004 SPINK7P58062 85 aa3.28□□□□□ -1.88
CLDND1-208ENST00000503004 Q9BRP9 147 aa3.28□□□□□ -1.88
CLDND1-208ENST00000503004 KRTAP1-5Q9BYS1 174 aa3.28□□□□□ -1.88
CLDND1-208ENST00000503004 Q8N377 158 aa3.27□□□□□ -1.89
CLDND1-208ENST00000503004 MP68P56378 58 aa3.27□□□□□ -1.89
CLDND1-208ENST00000503004 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 A0A1W2PNN7 141 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 H3BQ85 93 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 K7EQZ3 153 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 Q6ZRX8 168 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 WFDC13Q8IUB5 93 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 IGKV2-24A0A0C4DH68 120 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
CLDND1-208ENST00000503004 PLAC8Q9NZF1 115 aa3.26□□□□□ -1.89
CLDND1-208ENST00000503004 TGP01266 2768 aa3.25□□□□□ -1.89
CLDND1-208ENST00000503004 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
CLDND1-208ENST00000503004 STARD9Q9P2P6 4700 aa3.25□□□□□ -1.89
CLDND1-208ENST00000503004 NDUFB1O75438 58 aa3.25□□□□□ -1.89
CLDND1-208ENST00000503004 H0Y9J4 135 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 SPRR1AP35321 89 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 IGLV5-48A0A075B6I7 105 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 A0A096LNI7 61 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 CASC2Q6XLA1 102 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 COA5Q86WW8 74 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 LINC00476Q8WZB0 136 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 ZNF706Q9Y5V0 76 aaPredicted RBP3.24□□□□□ -1.89
CLDND1-208ENST00000503004 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
CLDND1-208ENST00000503004 MEGF8Q7Z7M0 2845 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 DNHD1Q96M86 4753 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 A0A1W2PNM2 257 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 DSCR10P59022 87 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 PRLHP81277 87 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 IGLV5-37A0A075B6J1 123 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 C1orf137Q5JT78 98 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 UBE2DNLQ8IWF7 75 aa3.23□□□□□ -1.89
CLDND1-208ENST00000503004 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
CLDND1-208ENST00000503004 KMT2AQ03164 3969 aa3.22□□□□□ -1.89
CLDND1-208ENST00000503004 SPAG11AQ6PDA7 123 aa3.22□□□□□ -1.89
CLDND1-208ENST00000503004 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
CLDND1-208ENST00000503004 IGLV5-52A0A0A0MRZ9 124 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms