RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 AKAP9Q99996 3911 aa3.09□□□□□ -1.91
NEDD4-203ENST00000502612 WNK1Q9H4A3 2382 aa3.09□□□□□ -1.92
NEDD4-203ENST00000502612 ACANP16112 2415 aa3.09□□□□□ -1.92
NEDD4-203ENST00000502612 FN1P02751 2386 aaKnown RBP3.08□□□□□ -1.92
NEDD4-203ENST00000502612 A0A1W2PNN7 141 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 ZNF73O43830 326 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-203ENST00000502612 COX7BP24311 80 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-203ENST00000502612 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-203ENST00000502612 LINC00575Q6W349 94 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 UBE2DNLQ8IWF7 75 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 B9D2Q9BPU9 175 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 RBM12B-AS1Q9P1G2 102 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 LINC00588Q9Y4M8 146 aa3.08□□□□□ -1.92
NEDD4-203ENST00000502612 TEP1Q99973 2627 aaKnown RBP3.08□□□□□ -1.92
NEDD4-203ENST00000502612 NSD1Q96L73 2696 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-203ENST00000502612 MTORP42345 2549 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 NUPR2A6NF83 97 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 ATP5EP2Q5VTU8 51 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 Q6ZRU5 148 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 DSCR8Q96T75 97 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 C2CD3Q4AC94 2353 aa3.07□□□□□ -1.92
NEDD4-203ENST00000502612 TRBV7-7A0A0K0K1E9 115 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 TRBV10-3A0A0K0K1G6 114 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 PSCAO43653 123 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 MT-ATP8P03928 68 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 CCKP06307 115 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 ELOF1P60002 83 aaKnown RBP3.06□□□□□ -1.92
NEDD4-203ENST00000502612 RBM3P98179 157 aaKnown RBP3.06□□□□□ -1.92
NEDD4-203ENST00000502612 UBL5Q9BZL1 73 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 XAGE1AQ9HD64 81 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 R4GN34 69 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 CUBNO60494 3623 aa3.06□□□□□ -1.92
NEDD4-203ENST00000502612 LOC110117498A0A087WWA1 95 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 IGKV4-1P06312 121 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 HRES1P13985 223 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 LINC00526Q96FQ7 95 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 C14orf132Q9NPU4 83 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
NEDD4-203ENST00000502612 A0A1B0GW54 56 aa3.04□□□□□ -1.92
NEDD4-203ENST00000502612 SDIM1Q6ZPB5 146 aa3.04□□□□□ -1.92
NEDD4-203ENST00000502612 Q6ZQY7 126 aa3.04□□□□□ -1.92
NEDD4-203ENST00000502612 KCNQ1DNQ9H478 68 aa3.04□□□□□ -1.92
NEDD4-203ENST00000502612 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
NEDD4-203ENST00000502612 IGKV2-24A0A0C4DH68 120 aa3.03□□□□□ -1.92
NEDD4-203ENST00000502612 ETDCA0A1B0GVM5 59 aa3.03□□□□□ -1.92
NEDD4-203ENST00000502612 P0C880 135 aa3.03□□□□□ -1.92
NEDD4-203ENST00000502612 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
NEDD4-203ENST00000502612 Q6JHZ5 121 aa3.03□□□□□ -1.92
NEDD4-203ENST00000502612 C22orf24Q9Y442 160 aa3.03□□□□□ -1.92
NEDD4-203ENST00000502612 NF1P21359 2839 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 ATOX1O00244 68 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 Q8NDZ9 215 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 APLNQ9ULZ1 77 aa3.02□□□□□ -1.93
NEDD4-203ENST00000502612 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-203ENST00000502612 KRTAP21-3Q3LHN1 58 aa3.01□□□□□ -1.93
NEDD4-203ENST00000502612 Q6ZQT0 140 aa3.01□□□□□ -1.93
NEDD4-203ENST00000502612 LINC00846Q9NV44 126 aa3.01□□□□□ -1.93
NEDD4-203ENST00000502612 JMJD1CQ15652 2540 aa3.01□□□□□ -1.93
NEDD4-203ENST00000502612 FAM236AA0A1B0GUQ0 79 aa3□□□□□ -1.93
NEDD4-203ENST00000502612 FAM236BA0A1B0GV22 79 aa3□□□□□ -1.93
NEDD4-203ENST00000502612 SPRR1AP35321 89 aa3□□□□□ -1.93
NEDD4-203ENST00000502612 FUSP35637 526 aaKnown RBP eCLIP3□□□□□ -1.93
NEDD4-203ENST00000502612 Q6ZRX8 168 aa3□□□□□ -1.93
NEDD4-203ENST00000502612 ATRQ13535 2644 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 TRBV7-4A0A0J9YYF1 115 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 NBDYA0A0U1RRE5 68 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 F8WEM9 126 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 BCE1O60756 84 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 SMIM20Q8N5G0 67 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 SMCR5Q8TEV8 140 aa2.99□□□□□ -1.93
NEDD4-203ENST00000502612 UQCRQO14949 82 aa2.98□□□□□ -1.93
NEDD4-203ENST00000502612 HIST1H4AP62805 103 aaKnown RBP2.98□□□□□ -1.93
NEDD4-203ENST00000502612 UBE2BP63146 152 aa2.98□□□□□ -1.93
NEDD4-203ENST00000502612 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
NEDD4-203ENST00000502612 FAM19A5Q7Z5A7 132 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-203ENST00000502612 TENM1Q9UKZ4 2725 aa2.97□□□□□ -1.93
NEDD4-203ENST00000502612 IGLV5-48A0A075B6I7 105 aa2.97□□□□□ -1.93
NEDD4-203ENST00000502612 HAMPP81172 84 aa2.97□□□□□ -1.93
NEDD4-203ENST00000502612 NREPQ16612 68 aa2.97□□□□□ -1.93
NEDD4-203ENST00000502612 C9orf163Q8N9P6 203 aa2.97□□□□□ -1.93
NEDD4-203ENST00000502612 NIPBLQ6KC79 2804 aaeCLIP2.96□□□□□ -1.94
NEDD4-203ENST00000502612 IGKV3D-7A0A0C4DH55 119 aa2.96□□□□□ -1.94
NEDD4-203ENST00000502612 C3orf22Q8N5N4 141 aa2.96□□□□□ -1.94
NEDD4-203ENST00000502612 DEFB105AQ8NG35 78 aa2.96□□□□□ -1.94
NEDD4-203ENST00000502612 A0A096LNI7 61 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 A8MWP4 228 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 COX7CP15954 63 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 C1orf137Q5JT78 98 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 C9orf153Q5TBE3 101 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 DPH3Q96FX2 82 aa2.95□□□□□ -1.94
NEDD4-203ENST00000502612 VWFP04275 2813 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms