RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-214ENST00000495485 PRLHP81277 87 aa6.38□□□□□ -1.39
HDAC3-214ENST00000495485 HERC2O95714 4834 aa6.38□□□□□ -1.39
HDAC3-214ENST00000495485 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
HDAC3-214ENST00000495485 XGP55808 180 aa6.37□□□□□ -1.39
HDAC3-214ENST00000495485 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
HDAC3-214ENST00000495485 PANO1I0J062 215 aa6.36□□□□□ -1.39
HDAC3-214ENST00000495485 LINC01547P58512 204 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-214ENST00000495485 ATP5EP2Q5VTU8 51 aa6.36□□□□□ -1.39
HDAC3-214ENST00000495485 Q6Q795 121 aa6.36□□□□□ -1.39
HDAC3-214ENST00000495485 FAT1Q14517 4588 aa6.35□□□□□ -1.39
HDAC3-214ENST00000495485 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
HDAC3-214ENST00000495485 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
HDAC3-214ENST00000495485 ST20-AS1Q8NBB2 130 aa6.35□□□□□ -1.39
HDAC3-214ENST00000495485 SPRR1BP22528 89 aa6.34□□□□□ -1.39
HDAC3-214ENST00000495485 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
HDAC3-214ENST00000495485 Q6JHZ5 121 aa6.34□□□□□ -1.39
HDAC3-214ENST00000495485 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
HDAC3-214ENST00000495485 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.4
HDAC3-214ENST00000495485 PSORS1C2Q9UIG4 136 aa6.33□□□□□ -1.4
HDAC3-214ENST00000495485 ZNF861PO60384 105 aa6.32□□□□□ -1.4
HDAC3-214ENST00000495485 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
HDAC3-214ENST00000495485 Q8N1X5 172 aa6.32□□□□□ -1.4
HDAC3-214ENST00000495485 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 TRBV7-7A0A0K0K1E9 115 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
HDAC3-214ENST00000495485 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
HDAC3-214ENST00000495485 NREPQ16612 68 aa6.3□□□□□ -1.4
HDAC3-214ENST00000495485 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
HDAC3-214ENST00000495485 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
HDAC3-214ENST00000495485 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
HDAC3-214ENST00000495485 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
HDAC3-214ENST00000495485 PCP4P48539 62 aa6.28□□□□□ -1.4
HDAC3-214ENST00000495485 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
HDAC3-214ENST00000495485 Q8NBF4 154 aa6.28□□□□□ -1.4
HDAC3-214ENST00000495485 CXCL6P80162 114 aa6.27□□□□□ -1.41
HDAC3-214ENST00000495485 HAMPP81172 84 aa6.27□□□□□ -1.41
HDAC3-214ENST00000495485 Q6ZVQ6 151 aa6.27□□□□□ -1.41
HDAC3-214ENST00000495485 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
HDAC3-214ENST00000495485 CRYGAP11844 174 aa6.25□□□□□ -1.41
HDAC3-214ENST00000495485 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
HDAC3-214ENST00000495485 IGKV3D-7A0A0C4DH55 119 aa6.24□□□□□ -1.41
HDAC3-214ENST00000495485 Q5VSD8 79 aa6.24□□□□□ -1.41
HDAC3-214ENST00000495485 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
HDAC3-214ENST00000495485 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
HDAC3-214ENST00000495485 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
HDAC3-214ENST00000495485 HIST1H4AP62805 103 aaKnown RBP6.23□□□□□ -1.41
HDAC3-214ENST00000495485 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
HDAC3-214ENST00000495485 BPY2O14599 106 aa6.22□□□□□ -1.41
HDAC3-214ENST00000495485 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-214ENST00000495485 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-214ENST00000495485 IGLV9-49A0A0B4J1Y8 123 aa6.2□□□□□ -1.42
HDAC3-214ENST00000495485 ANAPC13Q9BS18 74 aa6.2□□□□□ -1.42
HDAC3-214ENST00000495485 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
HDAC3-214ENST00000495485 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
HDAC3-214ENST00000495485 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
HDAC3-214ENST00000495485 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-214ENST00000495485 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
HDAC3-214ENST00000495485 ATOX1O00244 68 aa6.18□□□□□ -1.42
HDAC3-214ENST00000495485 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
HDAC3-214ENST00000495485 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
HDAC3-214ENST00000495485 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
HDAC3-214ENST00000495485 A0A087WSZ3 146 aa6.16□□□□□ -1.42
HDAC3-214ENST00000495485 J3KT08 172 aa6.16□□□□□ -1.42
HDAC3-214ENST00000495485 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
HDAC3-214ENST00000495485 MOBPQ13875 183 aa6.15□□□□□ -1.42
HDAC3-214ENST00000495485 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
HDAC3-214ENST00000495485 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
HDAC3-214ENST00000495485 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-214ENST00000495485 CD164Q04900 197 aa6.14□□□□□ -1.43
HDAC3-214ENST00000495485 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
HDAC3-214ENST00000495485 A0A087WVE0 104 aa6.11□□□□□ -1.43
HDAC3-214ENST00000495485 NDUFB1O75438 58 aa6.11□□□□□ -1.43
HDAC3-214ENST00000495485 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
HDAC3-214ENST00000495485 OXTP01178 125 aa6.1□□□□□ -1.43
HDAC3-214ENST00000495485 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
HDAC3-214ENST00000495485 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
HDAC3-214ENST00000495485 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
HDAC3-214ENST00000495485 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
HDAC3-214ENST00000495485 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
HDAC3-214ENST00000495485 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
HDAC3-214ENST00000495485 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-214ENST00000495485 HRCT1Q6UXD1 115 aa6.07□□□□□ -1.44
HDAC3-214ENST00000495485 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
HDAC3-214ENST00000495485 UQCRQO14949 82 aa6.06□□□□□ -1.44
HDAC3-214ENST00000495485 COX7CP15954 63 aa6.06□□□□□ -1.44
HDAC3-214ENST00000495485 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
HDAC3-214ENST00000495485 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
HDAC3-214ENST00000495485 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
HDAC3-214ENST00000495485 A8MWP4 228 aa6.05□□□□□ -1.44
HDAC3-214ENST00000495485 DSCR10P59022 87 aa6.05□□□□□ -1.44
HDAC3-214ENST00000495485 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
HDAC3-214ENST00000495485 TNXBP22105 4242 aa6.04□□□□□ -1.44
HDAC3-214ENST00000495485 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
HDAC3-214ENST00000495485 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
HDAC3-214ENST00000495485 K7EQZ3 153 aa6.03□□□□□ -1.44
HDAC3-214ENST00000495485 SPAG11AQ6PDA7 123 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms