RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
UPK3B-205ENST00000490360 SCGB1D4Q6XE38 83 aa9.93□□□□□ -0.82
UPK3B-205ENST00000490360 KRTAP9-3Q9BYQ3 159 aa9.93□□□□□ -0.82
UPK3B-205ENST00000490360 A8MUU9 505 aa9.92□□□□□ -0.82
UPK3B-205ENST00000490360 VAMP3Q15836 100 aa9.92□□□□□ -0.82
UPK3B-205ENST00000490360 MT1FP04733 61 aa9.91□□□□□ -0.82
UPK3B-205ENST00000490360 KRTAP10-10P60014 251 aa9.91□□□□□ -0.82
UPK3B-205ENST00000490360 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
UPK3B-205ENST00000490360 SLC7A5P1Q8MH63 180 aa9.91□□□□□ -0.82
UPK3B-205ENST00000490360 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.82
UPK3B-205ENST00000490360 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.82
UPK3B-205ENST00000490360 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
UPK3B-205ENST00000490360 SYNE2Q8WXH0 6885 aaKnown RBP9.89□□□□□ -0.83
UPK3B-205ENST00000490360 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
UPK3B-205ENST00000490360 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
UPK3B-205ENST00000490360 PET117Q6UWS5 81 aa9.87□□□□□ -0.83
UPK3B-205ENST00000490360 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
UPK3B-205ENST00000490360 Q6ZQY7 126 aa9.86□□□□□ -0.83
UPK3B-205ENST00000490360 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
UPK3B-205ENST00000490360 hADV29S1A0JD25 119 aa9.84□□□□□ -0.83
UPK3B-205ENST00000490360 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
UPK3B-205ENST00000490360 MUSTN1Q8IVN3 82 aa9.84□□□□□ -0.83
UPK3B-205ENST00000490360 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
UPK3B-205ENST00000490360 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
UPK3B-205ENST00000490360 KRTAP19-6Q3LI70 58 aa9.79□□□□□ -0.84
UPK3B-205ENST00000490360 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.78□□□□□ -0.84
UPK3B-205ENST00000490360 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
UPK3B-205ENST00000490360 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
UPK3B-205ENST00000490360 COLCA2A8K830 154 aa9.72□□□□□ -0.85
UPK3B-205ENST00000490360 C3orf79P0CE67 100 aa9.72□□□□□ -0.85
UPK3B-205ENST00000490360 TEN1Q86WV5 123 aa9.72□□□□□ -0.85
UPK3B-205ENST00000490360 H3BUT2 72 aa9.71□□□□□ -0.86
UPK3B-205ENST00000490360 KRTAP6-3Q3LI67 103 aa9.71□□□□□ -0.86
UPK3B-205ENST00000490360 ANKRD39Q53RE8 183 aa9.7□□□□□ -0.86
UPK3B-205ENST00000490360 HRES1P13985 223 aa9.69□□□□□ -0.86
UPK3B-205ENST00000490360 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
UPK3B-205ENST00000490360 DSCR10P59022 87 aa9.68□□□□□ -0.86
UPK3B-205ENST00000490360 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
UPK3B-205ENST00000490360 BVES-AS1Q5T3Y7 98 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
UPK3B-205ENST00000490360 KRTDAPP60985 99 aa9.66□□□□□ -0.86
UPK3B-205ENST00000490360 LINC00313P59037 77 aa9.65□□□□□ -0.86
UPK3B-205ENST00000490360 A0A087WSZ3 146 aa9.64□□□□□ -0.87
UPK3B-205ENST00000490360 C12orf57Q99622 126 aa9.64□□□□□ -0.87
UPK3B-205ENST00000490360 SNCGO76070 127 aa9.61□□□□□ -0.87
UPK3B-205ENST00000490360 NOTCH2NLQ7Z3S9 236 aa9.61□□□□□ -0.87
UPK3B-205ENST00000490360 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
UPK3B-205ENST00000490360 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
UPK3B-205ENST00000490360 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
UPK3B-205ENST00000490360 ATOH7Q8N100 152 aa9.57□□□□□ -0.88
UPK3B-205ENST00000490360 A8MWP4 228 aa9.54□□□□□ -0.88
UPK3B-205ENST00000490360 GHRHP01286 108 aa9.53□□□□□ -0.88
UPK3B-205ENST00000490360 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
UPK3B-205ENST00000490360 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
UPK3B-205ENST00000490360 H3BMG7 143 aa9.5□□□□□ -0.89
UPK3B-205ENST00000490360 H0YGX0 51 aa9.47□□□□□ -0.89
UPK3B-205ENST00000490360 A0A1W2PNM2 257 aa9.44□□□□□ -0.9
UPK3B-205ENST00000490360 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
UPK3B-205ENST00000490360 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
UPK3B-205ENST00000490360 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
UPK3B-205ENST00000490360 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
UPK3B-205ENST00000490360 FABP2P12104 132 aa9.4□□□□□ -0.9
UPK3B-205ENST00000490360 SPINK7P58062 85 aa9.4□□□□□ -0.9
UPK3B-205ENST00000490360 HIST1H4GQ99525 98 aa9.4□□□□□ -0.9
UPK3B-205ENST00000490360 A0A1B0GX51 115 aa9.39□□□□□ -0.91
UPK3B-205ENST00000490360 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
UPK3B-205ENST00000490360 LINC00472Q9H8W2 130 aa9.38□□□□□ -0.91
UPK3B-205ENST00000490360 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
UPK3B-205ENST00000490360 ANKRD29Q8N6D5 301 aa9.37□□□□□ -0.91
UPK3B-205ENST00000490360 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
UPK3B-205ENST00000490360 NEBP20929 6669 aa9.37□□□□□ -0.91
UPK3B-205ENST00000490360 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
UPK3B-205ENST00000490360 DEFB116Q30KQ4 102 aa9.34□□□□□ -0.91
UPK3B-205ENST00000490360 A0A1B0GVX0 72 aa9.3□□□□□ -0.92
UPK3B-205ENST00000490360 H3BQ85 93 aa9.29□□□□□ -0.92
UPK3B-205ENST00000490360 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
UPK3B-205ENST00000490360 TRACP01848 142 aa9.28□□□□□ -0.92
UPK3B-205ENST00000490360 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
UPK3B-205ENST00000490360 KRTAP20-1Q3LI63 56 aa9.26□□□□□ -0.93
UPK3B-205ENST00000490360 CCKP06307 115 aa9.25□□□□□ -0.93
UPK3B-205ENST00000490360 MUC12Q9UKN1 5478 aa9.22□□□□□ -0.93
UPK3B-205ENST00000490360 COX8AP10176 69 aa9.22□□□□□ -0.93
UPK3B-205ENST00000490360 S100A1P23297 94 aa9.22□□□□□ -0.93
UPK3B-205ENST00000490360 DLEU1O43261 78 aa9.21□□□□□ -0.94
UPK3B-205ENST00000490360 ORMDL1Q9P0S3 153 aa9.21□□□□□ -0.94
UPK3B-205ENST00000490360 DNAL4O96015 105 aa9.2□□□□□ -0.94
UPK3B-205ENST00000490360 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
UPK3B-205ENST00000490360 J3KT08 172 aa9.19□□□□□ -0.94
UPK3B-205ENST00000490360 TMEM256-PLSCR3K7ERE1 68 aa9.19□□□□□ -0.94
UPK3B-205ENST00000490360 S100A2P29034 98 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms