RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TRACP01848 142 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 SLPIP03973 132 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 UNQ6190/PRO20217Q6UXQ8 127 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 CAMK2N2Q96S95 79 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 TMEM126AQ9H061 195 aa4.43□□□□□ -1.7
EXOSC3-206ENST00000489414 IGLV1-50A0A075B6I6 118 aa4.42□□□□□ -1.7
EXOSC3-206ENST00000489414 IGKV2-28A0A075B6P5 120 aa4.42□□□□□ -1.7
EXOSC3-206ENST00000489414 IGKV2D-28P01615 120 aa4.42□□□□□ -1.7
EXOSC3-206ENST00000489414 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
EXOSC3-206ENST00000489414 SMIM11BQ8TCY0 68 aa4.42□□□□□ -1.7
EXOSC3-206ENST00000489414 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
EXOSC3-206ENST00000489414 C9orf116Q5BN46 136 aaPredicted RBP4.41□□□□□ -1.7
EXOSC3-206ENST00000489414 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
EXOSC3-206ENST00000489414 A0A1B0GX51 115 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 NCR3O14931 201 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 BAALC-AS2P0C853 105 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 SYCNQ0VAF6 134 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 KRTAP26-1Q6PEX3 210 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 Q6ZRP5 223 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
EXOSC3-206ENST00000489414 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
EXOSC3-206ENST00000489414 RPL18AQ02543 176 aaKnown RBP4.37□□□□□ -1.71
EXOSC3-206ENST00000489414 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
EXOSC3-206ENST00000489414 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
EXOSC3-206ENST00000489414 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 USP17L23D6RBM5 183 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 H3BQ85 93 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 M0R378 163 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 FAM218AQ96MZ4 157 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 ORMDL1Q9P0S3 153 aa4.36□□□□□ -1.71
EXOSC3-206ENST00000489414 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 GAGE2EQ4V326 116 aa4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 C6orf99Q4VX62 202 aa4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 NKAPP1Q8N9T2 125 aa4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 DIRC1Q969H9 104 aa4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 GAGE2DQ9UEU5 116 aa4.35□□□□□ -1.71
EXOSC3-206ENST00000489414 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 FAM240AA0A1B0GVK7 77 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 ACYP1P07311 99 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
EXOSC3-206ENST00000489414 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 SCGB1A1P11684 91 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 VPREB1P12018 145 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 PCP4P48539 62 aa4.33□□□□□ -1.72
EXOSC3-206ENST00000489414 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
EXOSC3-206ENST00000489414 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
EXOSC3-206ENST00000489414 COX7BP24311 80 aa4.32□□□□□ -1.72
EXOSC3-206ENST00000489414 LINC00575Q6W349 94 aa4.32□□□□□ -1.72
EXOSC3-206ENST00000489414 LINC00167Q96N53 147 aa4.32□□□□□ -1.72
EXOSC3-206ENST00000489414 Q8NDZ9 215 aa4.31□□□□□ -1.72
EXOSC3-206ENST00000489414 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
EXOSC3-206ENST00000489414 GAGE2AQ6NT46 116 aa4.3□□□□□ -1.72
EXOSC3-206ENST00000489414 ELOF1P60002 83 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-206ENST00000489414 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-206ENST00000489414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-206ENST00000489414 LAMTOR3Q9UHA4 124 aa4.29□□□□□ -1.72
EXOSC3-206ENST00000489414 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
EXOSC3-206ENST00000489414 PRYO14603 147 aa4.28□□□□□ -1.72
EXOSC3-206ENST00000489414 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
EXOSC3-206ENST00000489414 ETDCA0A1B0GVM5 59 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 H0Y9J4 135 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 MT-ATP8P03928 68 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 PDE6GP18545 87 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 Q6ZQY7 126 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 DSCR8Q96T75 97 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 KCNQ1DNQ9H478 68 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 DHRS4-AS1Q9P1J3 65 aa4.27□□□□□ -1.73
EXOSC3-206ENST00000489414 RBM3P98179 157 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-206ENST00000489414 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-206ENST00000489414 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-206ENST00000489414 LINC00643Q86TS7 51 aa4.26□□□□□ -1.73
EXOSC3-206ENST00000489414 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
EXOSC3-206ENST00000489414 A0A1B0GV72 72 aa4.25□□□□□ -1.73
EXOSC3-206ENST00000489414 CCKP06307 115 aa4.25□□□□□ -1.73
EXOSC3-206ENST00000489414 Q6Q795 121 aa4.25□□□□□ -1.73
EXOSC3-206ENST00000489414 LINC00474Q9P2X8 69 aa4.25□□□□□ -1.73
EXOSC3-206ENST00000489414 IGKV2-24A0A0C4DH68 120 aa4.24□□□□□ -1.73
EXOSC3-206ENST00000489414 RPL37AP8A6NKH3 93 aa4.24□□□□□ -1.73
EXOSC3-206ENST00000489414 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
EXOSC3-206ENST00000489414 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
EXOSC3-206ENST00000489414 LOC110117498A0A087WWA1 95 aa4.23□□□□□ -1.73
EXOSC3-206ENST00000489414 FAM168BA1KXE4 195 aa4.23□□□□□ -1.73
EXOSC3-206ENST00000489414 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms