RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 Q6ZRP5 223 aa8.48□□□□□ -1.05
CHD1L-208ENST00000488864 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
CHD1L-208ENST00000488864 Q8N377 158 aa8.47□□□□□ -1.05
CHD1L-208ENST00000488864 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
CHD1L-208ENST00000488864 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
CHD1L-208ENST00000488864 FAM30AQ9NZY2 134 aa8.44□□□□□ -1.06
CHD1L-208ENST00000488864 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
CHD1L-208ENST00000488864 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
CHD1L-208ENST00000488864 HECTD4Q9Y4D8 3996 aa8.44□□□□□ -1.06
CHD1L-208ENST00000488864 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
CHD1L-208ENST00000488864 RYR3Q15413 4870 aa8.43□□□□□ -1.06
CHD1L-208ENST00000488864 BRK1Q8WUW1 75 aa8.43□□□□□ -1.06
CHD1L-208ENST00000488864 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
CHD1L-208ENST00000488864 IGLV5-48A0A075B6I7 105 aa8.42□□□□□ -1.06
CHD1L-208ENST00000488864 C7orf33Q8WU49 177 aa8.42□□□□□ -1.06
CHD1L-208ENST00000488864 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
CHD1L-208ENST00000488864 DNAH11Q96DT5 4516 aa8.42□□□□□ -1.06
CHD1L-208ENST00000488864 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
CHD1L-208ENST00000488864 F8WDY8 70 aa8.41□□□□□ -1.06
CHD1L-208ENST00000488864 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.07
CHD1L-208ENST00000488864 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
CHD1L-208ENST00000488864 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
CHD1L-208ENST00000488864 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
CHD1L-208ENST00000488864 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
CHD1L-208ENST00000488864 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
CHD1L-208ENST00000488864 Q9BRP9 147 aa8.38□□□□□ -1.07
CHD1L-208ENST00000488864 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 PKD1P98161 4303 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 A0A096LNI7 61 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
CHD1L-208ENST00000488864 FAM168BA1KXE4 195 aa8.35□□□□□ -1.07
CHD1L-208ENST00000488864 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
CHD1L-208ENST00000488864 C1orf137Q5JT78 98 aa8.35□□□□□ -1.07
CHD1L-208ENST00000488864 DSCR10P59022 87 aa8.35□□□□□ -1.07
CHD1L-208ENST00000488864 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
CHD1L-208ENST00000488864 Q6ZRX8 168 aa8.34□□□□□ -1.07
CHD1L-208ENST00000488864 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
CHD1L-208ENST00000488864 PANO1I0J062 215 aa8.33□□□□□ -1.08
CHD1L-208ENST00000488864 K7EQZ3 153 aa8.33□□□□□ -1.08
CHD1L-208ENST00000488864 Q8NBF4 154 aa8.33□□□□□ -1.08
CHD1L-208ENST00000488864 DHRS4-AS1Q9P1J3 65 aa8.33□□□□□ -1.08
CHD1L-208ENST00000488864 C16orf90A8MZG2 172 aa8.32□□□□□ -1.08
CHD1L-208ENST00000488864 ZCCHC13Q8WW36 166 aaKnown RBP8.32□□□□□ -1.08
CHD1L-208ENST00000488864 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
CHD1L-208ENST00000488864 IGLV1-50A0A075B6I6 118 aa8.31□□□□□ -1.08
CHD1L-208ENST00000488864 C1orf64Q8NEQ6 169 aa8.31□□□□□ -1.08
CHD1L-208ENST00000488864 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
CHD1L-208ENST00000488864 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
CHD1L-208ENST00000488864 A0A1B0GW54 56 aa8.3□□□□□ -1.08
CHD1L-208ENST00000488864 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
CHD1L-208ENST00000488864 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
CHD1L-208ENST00000488864 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
CHD1L-208ENST00000488864 SPRR1AP35321 89 aa8.29□□□□□ -1.08
CHD1L-208ENST00000488864 PRR4Q16378 134 aa8.28□□□□□ -1.08
CHD1L-208ENST00000488864 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
CHD1L-208ENST00000488864 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
CHD1L-208ENST00000488864 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
CHD1L-208ENST00000488864 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 DEFB116Q30KQ4 102 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 UBE2BP63146 152 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
CHD1L-208ENST00000488864 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
CHD1L-208ENST00000488864 DNAH8Q96JB1 4490 aa8.24□□□□□ -1.09
CHD1L-208ENST00000488864 Q1T7F1 81 aa8.23□□□□□ -1.09
CHD1L-208ENST00000488864 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
CHD1L-208ENST00000488864 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
CHD1L-208ENST00000488864 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
CHD1L-208ENST00000488864 PSPHP1O15172 72 aa8.21□□□□□ -1.09
CHD1L-208ENST00000488864 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.1
CHD1L-208ENST00000488864 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
CHD1L-208ENST00000488864 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
CHD1L-208ENST00000488864 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
CHD1L-208ENST00000488864 RPL37AP61513 92 aaKnown RBP8.18□□□□□ -1.1
CHD1L-208ENST00000488864 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
CHD1L-208ENST00000488864 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
CHD1L-208ENST00000488864 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
CHD1L-208ENST00000488864 V9GYY9 64 aa8.17□□□□□ -1.1
CHD1L-208ENST00000488864 Q6ZSA8 131 aa8.16□□□□□ -1.1
CHD1L-208ENST00000488864 PRR15Q8IV56 129 aa8.16□□□□□ -1.1
CHD1L-208ENST00000488864 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
CHD1L-208ENST00000488864 A0A087WSZ3 146 aa8.15□□□□□ -1.1
CHD1L-208ENST00000488864 PRLHP81277 87 aa8.14□□□□□ -1.11
CHD1L-208ENST00000488864 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
CHD1L-208ENST00000488864 EPPK1P58107 5090 aaKnown RBP8.13□□□□□ -1.11
CHD1L-208ENST00000488864 A8MUN3 132 aa8.12□□□□□ -1.11
CHD1L-208ENST00000488864 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
CHD1L-208ENST00000488864 NDUFB1O75438 58 aa8.12□□□□□ -1.11
CHD1L-208ENST00000488864 MP68P56378 58 aa8.12□□□□□ -1.11
CHD1L-208ENST00000488864 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
CHD1L-208ENST00000488864 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
CHD1L-208ENST00000488864 A8MU10 97 aa8.1□□□□□ -1.11
CHD1L-208ENST00000488864 IGLV8-61A0A075B6I0 122 aa8.09□□□□□ -1.11
CHD1L-208ENST00000488864 H0Y9P7 68 aa8.08□□□□□ -1.12
CHD1L-208ENST00000488864 SEC61GP60059 68 aa8.08□□□□□ -1.12
CHD1L-208ENST00000488864 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
CHD1L-208ENST00000488864 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms