RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KLKP1Q107X0 134 aa11.27□□□□□ -0.6
PDLIM7-207ENST00000486828 LYSTQ99698 3801 aa11.27□□□□□ -0.6
PDLIM7-207ENST00000486828 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.6
PDLIM7-207ENST00000486828 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
PDLIM7-207ENST00000486828 TENM2Q9NT68 2774 aa11.27□□□□□ -0.61
PDLIM7-207ENST00000486828 HIGD2AQ9BW72 106 aa11.26□□□□□ -0.61
PDLIM7-207ENST00000486828 Q6ZRN7 208 aaPredicted RBP11.25□□□□□ -0.61
PDLIM7-207ENST00000486828 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
PDLIM7-207ENST00000486828 C1orf195Q5TG92 126 aa11.24□□□□□ -0.61
PDLIM7-207ENST00000486828 LINC00336Q6ZUF6 198 aa11.24□□□□□ -0.61
PDLIM7-207ENST00000486828 IGLV8-61A0A075B6I0 122 aa11.23□□□□□ -0.61
PDLIM7-207ENST00000486828 H0Y9J4 135 aa11.23□□□□□ -0.61
PDLIM7-207ENST00000486828 IGFL1Q6UW32 110 aa11.23□□□□□ -0.61
PDLIM7-207ENST00000486828 OXTP01178 125 aa11.23□□□□□ -0.61
PDLIM7-207ENST00000486828 H7BZZ5 65 aa11.22□□□□□ -0.61
PDLIM7-207ENST00000486828 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
PDLIM7-207ENST00000486828 EPM2AB3EWF7 344 aa11.21□□□□□ -0.62
PDLIM7-207ENST00000486828 SNURFQ9Y675 71 aa11.21□□□□□ -0.62
PDLIM7-207ENST00000486828 STARD9Q9P2P6 4700 aa11.2□□□□□ -0.62
PDLIM7-207ENST00000486828 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
PDLIM7-207ENST00000486828 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
PDLIM7-207ENST00000486828 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
PDLIM7-207ENST00000486828 UBE2AP49459 152 aa11.19□□□□□ -0.62
PDLIM7-207ENST00000486828 DSCR10P59022 87 aa11.18□□□□□ -0.62
PDLIM7-207ENST00000486828 SPRR1BP22528 89 aa11.17□□□□□ -0.62
PDLIM7-207ENST00000486828 FAM236DA0A1B0GTK5 79 aa11.17□□□□□ -0.62
PDLIM7-207ENST00000486828 FAM236CP0DP71 79 aa11.17□□□□□ -0.62
PDLIM7-207ENST00000486828 PLECQ15149 4684 aaKnown RBP11.17□□□□□ -0.62
PDLIM7-207ENST00000486828 PANO1I0J062 215 aa11.15□□□□□ -0.62
PDLIM7-207ENST00000486828 NDUFC1O43677 76 aa11.15□□□□□ -0.62
PDLIM7-207ENST00000486828 TMEM254Q8TBM7 123 aa11.15□□□□□ -0.62
PDLIM7-207ENST00000486828 K7EQZ3 153 aa11.13□□□□□ -0.63
PDLIM7-207ENST00000486828 A0A087WSZ3 146 aa11.11□□□□□ -0.63
PDLIM7-207ENST00000486828 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
PDLIM7-207ENST00000486828 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
PDLIM7-207ENST00000486828 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
PDLIM7-207ENST00000486828 A0A087WTM6 91 aa11.08□□□□□ -0.64
PDLIM7-207ENST00000486828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.08□□□□□ -0.64
PDLIM7-207ENST00000486828 FAM30AQ9NZY2 134 aa11.07□□□□□ -0.64
PDLIM7-207ENST00000486828 VPS13DQ5THJ4 4388 aa11.05□□□□□ -0.64
PDLIM7-207ENST00000486828 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
PDLIM7-207ENST00000486828 SERP1Q9Y6X1 66 aa11.05□□□□□ -0.64
PDLIM7-207ENST00000486828 DEFB116Q30KQ4 102 aa11.04□□□□□ -0.64
PDLIM7-207ENST00000486828 LCE6AA0A183 80 aa11.03□□□□□ -0.64
PDLIM7-207ENST00000486828 CD164Q04900 197 aa11.03□□□□□ -0.64
PDLIM7-207ENST00000486828 ATP5EP56381 51 aaPredicted RBP11.01□□□□□ -0.65
PDLIM7-207ENST00000486828 Q6ZR54 194 aa11.01□□□□□ -0.65
PDLIM7-207ENST00000486828 RTL8CO15255 209 aa11□□□□□ -0.65
PDLIM7-207ENST00000486828 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
PDLIM7-207ENST00000486828 SMIM26A0A096LP01 95 aa10.97□□□□□ -0.65
PDLIM7-207ENST00000486828 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
PDLIM7-207ENST00000486828 LINC00472Q9H8W2 130 aa10.96□□□□□ -0.65
PDLIM7-207ENST00000486828 PMAIP1Q13794 54 aa10.94□□□□□ -0.66
PDLIM7-207ENST00000486828 LINC00483Q53H64 154 aa10.94□□□□□ -0.66
PDLIM7-207ENST00000486828 WFDC13Q8IUB5 93 aa10.94□□□□□ -0.66
PDLIM7-207ENST00000486828 KMT2CQ8NEZ4 4911 aaKnown RBP10.93□□□□□ -0.66
PDLIM7-207ENST00000486828 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
PDLIM7-207ENST00000486828 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
PDLIM7-207ENST00000486828 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
PDLIM7-207ENST00000486828 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
PDLIM7-207ENST00000486828 A8MWP4 228 aa10.92□□□□□ -0.66
PDLIM7-207ENST00000486828 KRTAP29-1A8MX34 341 aaPredicted RBP10.92□□□□□ -0.66
PDLIM7-207ENST00000486828 PSORS1C2Q9UIG4 136 aa10.92□□□□□ -0.66
PDLIM7-207ENST00000486828 ZCCHC13Q8WW36 166 aaKnown RBP10.91□□□□□ -0.66
PDLIM7-207ENST00000486828 ZNF706Q9Y5V0 76 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-207ENST00000486828 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
PDLIM7-207ENST00000486828 ALMS1Q8TCU4 4167 aa10.9□□□□□ -0.66
PDLIM7-207ENST00000486828 IGLV9-49A0A0B4J1Y8 123 aa10.9□□□□□ -0.66
PDLIM7-207ENST00000486828 LY6G6CO95867 125 aa10.9□□□□□ -0.66
PDLIM7-207ENST00000486828 C1orf134Q5TEV5 83 aa10.9□□□□□ -0.67
PDLIM7-207ENST00000486828 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
PDLIM7-207ENST00000486828 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
PDLIM7-207ENST00000486828 CASC2Q6XLA1 102 aa10.86□□□□□ -0.67
PDLIM7-207ENST00000486828 HYDINQ4G0P3 5121 aa10.86□□□□□ -0.67
PDLIM7-207ENST00000486828 ZNF861PO60384 105 aa10.85□□□□□ -0.67
PDLIM7-207ENST00000486828 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-207ENST00000486828 DNAH2Q9P225 4427 aa10.84□□□□□ -0.67
PDLIM7-207ENST00000486828 Q96NJ1 140 aa10.82□□□□□ -0.68
PDLIM7-207ENST00000486828 DNAH6Q9C0G6 4158 aa10.81□□□□□ -0.68
PDLIM7-207ENST00000486828 BRK1Q8WUW1 75 aa10.81□□□□□ -0.68
PDLIM7-207ENST00000486828 MP68P56378 58 aa10.8□□□□□ -0.68
PDLIM7-207ENST00000486828 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
PDLIM7-207ENST00000486828 NDUFB1O75438 58 aa10.8□□□□□ -0.68
PDLIM7-207ENST00000486828 MMP24-AS1A0A0U1RRL7 71 aa10.79□□□□□ -0.68
PDLIM7-207ENST00000486828 MOBPQ13875 183 aa10.79□□□□□ -0.68
PDLIM7-207ENST00000486828 ANAPC11Q9NYG5 84 aa10.76□□□□□ -0.69
PDLIM7-207ENST00000486828 RYR3Q15413 4870 aa10.76□□□□□ -0.69
PDLIM7-207ENST00000486828 RYR2Q92736 4967 aa10.76□□□□□ -0.69
PDLIM7-207ENST00000486828 DNAH8Q96JB1 4490 aa10.74□□□□□ -0.69
PDLIM7-207ENST00000486828 IGLV7-43P04211 117 aa10.74□□□□□ -0.69
PDLIM7-207ENST00000486828 H0Y9P7 68 aa10.74□□□□□ -0.69
PDLIM7-207ENST00000486828 H3BPC8 53 aa10.74□□□□□ -0.69
PDLIM7-207ENST00000486828 LINC00208Q96KT6 92 aa10.74□□□□□ -0.69
PDLIM7-207ENST00000486828 TRAV22A0A0B4J277 110 aa10.73□□□□□ -0.69
PDLIM7-207ENST00000486828 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
PDLIM7-207ENST00000486828 FAM229BQ4G0N7 80 aa10.72□□□□□ -0.69
PDLIM7-207ENST00000486828 ASB16-AS1Q495Z4 193 aa10.7□□□□□ -0.7
PDLIM7-207ENST00000486828 CYP4F30PQ9H0H9 118 aa10.69□□□□□ -0.7
PDLIM7-207ENST00000486828 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
PDLIM7-207ENST00000486828 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms