RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 MT4P47944 62 aa-0.47□□□□□ -2.48
NSMCE4A-210ENST00000483541 PRO3102Q9H379 93 aa-0.47□□□□□ -2.48
NSMCE4A-210ENST00000483541 DIP2BQ9P265 1576 aa-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 PLCH1Q4KWH8 1693 aa-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 IFI27P40305 119 aaPredicted RBP-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 GNG2P59768 71 aa-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 ZZEF1O43149 2961 aa-0.48□□□□□ -2.49
NSMCE4A-210ENST00000483541 SMARCA2P51531 1590 aa-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 RYR2Q92736 4967 aa-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 ATP5EP2Q5VTU8 51 aa-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 DEPDC5O75140 1603 aa-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 WIZO95785 1651 aa-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 FASNP49327 2511 aaKnown RBP-0.49□□□□□ -2.49
NSMCE4A-210ENST00000483541 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
NSMCE4A-210ENST00000483541 CEP290O15078 2479 aa-0.5□□□□□ -2.49
NSMCE4A-210ENST00000483541 UMAD1C9J7I0 102 aa-0.5□□□□□ -2.49
NSMCE4A-210ENST00000483541 LINC00158P58513 81 aa-0.5□□□□□ -2.49
NSMCE4A-210ENST00000483541 KRTAP19-8Q3LI54 63 aa-0.5□□□□□ -2.49
NSMCE4A-210ENST00000483541 TDRG1Q3Y452 100 aa-0.51□□□□□ -2.49
NSMCE4A-210ENST00000483541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.51□□□□□ -2.49
NSMCE4A-210ENST00000483541 MTORP42345 2549 aa-0.52□□□□□ -2.49
NSMCE4A-210ENST00000483541 LRRK2Q5S007 2527 aa-0.52□□□□□ -2.49
NSMCE4A-210ENST00000483541 DSPP15924 2871 aaKnown RBP-0.52□□□□□ -2.49
NSMCE4A-210ENST00000483541 HTTP42858 3142 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 DCAF1Q9Y4B6 1507 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 LCE6AA0A183 80 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 ADIRFQ15847 76 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 ST20Q9HBF5 79 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 ITSN1Q15811 1721 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 RICTORQ6R327 1708 aa-0.53□□□□□ -2.49
NSMCE4A-210ENST00000483541 USP9YO00507 2555 aaPredicted RBP-0.53□□□□□ -2.5
NSMCE4A-210ENST00000483541 ACACAQ13085 2346 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 ABCA13Q86UQ4 5058 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 H3BNG1 76 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 NDUFA4O00483 81 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 S100A13Q99584 98 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 THOC2Q8NI27 1593 aaKnown RBP-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 ITPR3Q14573 2671 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 MED14O60244 1454 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 CCDC18Q5T9S5 1454 aa-0.54□□□□□ -2.5
NSMCE4A-210ENST00000483541 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 FAM186AA6NE01 2351 aa-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 A0A087WXM4 84 aa-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 IFI6P09912 130 aa-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 NREPQ16612 68 aa-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 GCN1Q92616 2671 aaKnown RBP-0.55□□□□□ -2.5
NSMCE4A-210ENST00000483541 ANKRD11Q6UB99 2663 aaPredicted RBP-0.56□□□□□ -2.5
NSMCE4A-210ENST00000483541 TACC2O95359 2948 aa-0.56□□□□□ -2.5
NSMCE4A-210ENST00000483541 LAMA2P24043 3122 aaKnown RBP-0.56□□□□□ -2.5
NSMCE4A-210ENST00000483541 DEFA5Q01523 94 aa-0.56□□□□□ -2.5
NSMCE4A-210ENST00000483541 KDM5DQ9BY66 1539 aa-0.56□□□□□ -2.5
NSMCE4A-210ENST00000483541 ABCC1P33527 1531 aa-0.57□□□□□ -2.5
NSMCE4A-210ENST00000483541 C9orf92A6NGG3 77 aa-0.57□□□□□ -2.5
NSMCE4A-210ENST00000483541 H0YAA0 97 aa-0.57□□□□□ -2.5
NSMCE4A-210ENST00000483541 PKD1L2Q7Z442 2459 aa-0.57□□□□□ -2.5
NSMCE4A-210ENST00000483541 USP9XQ93008 2570 aaPredicted RBP-0.57□□□□□ -2.5
NSMCE4A-210ENST00000483541 MYO18BQ8IUG5 2567 aa-0.58□□□□□ -2.5
NSMCE4A-210ENST00000483541 LYSTQ99698 3801 aa-0.58□□□□□ -2.5
NSMCE4A-210ENST00000483541 DNHD1Q96M86 4753 aa-0.58□□□□□ -2.5
NSMCE4A-210ENST00000483541 CFAP74Q9C0B2 1584 aa-0.58□□□□□ -2.5
NSMCE4A-210ENST00000483541 PKD1P98161 4303 aa-0.58□□□□□ -2.5
NSMCE4A-210ENST00000483541 DMXL1Q9Y485 3027 aa-0.59□□□□□ -2.5
NSMCE4A-210ENST00000483541 CUBNO60494 3623 aa-0.59□□□□□ -2.5
NSMCE4A-210ENST00000483541 WDR87Q6ZQQ6 2873 aa-0.59□□□□□ -2.5
NSMCE4A-210ENST00000483541 MAP3K1Q13233 1512 aa-0.59□□□□□ -2.5
NSMCE4A-210ENST00000483541 ERVK-7P63135 1459 aa-0.6□□□□□ -2.5
NSMCE4A-210ENST00000483541 TJP1Q07157 1748 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 HFM1A2PYH4 1435 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 H3BUT2 72 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 SMIM13P0DJ93 91 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 HMGA1P17096 107 aaKnown RBP-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 DEFB121Q5J5C9 76 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 SPRR2FQ96RM1 72 aa-0.6□□□□□ -2.51
NSMCE4A-210ENST00000483541 LYNX1G3V0Z9 82 aa-0.61□□□□□ -2.51
NSMCE4A-210ENST00000483541 IAPPP10997 89 aa-0.61□□□□□ -2.51
NSMCE4A-210ENST00000483541 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.61□□□□□ -2.51
NSMCE4A-210ENST00000483541 FAT3Q8TDW7 4589 aa-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 ZC3H13Q5T200 1668 aaKnown RBP-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 NIPBLQ6KC79 2804 aaeCLIP-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 MRPL33O75394 65 aaKnown RBP-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 MUC17Q685J3 4493 aa-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 NBPF19A0A087WUL8 3843 aa-0.62□□□□□ -2.51
NSMCE4A-210ENST00000483541 AKAP9Q99996 3911 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 UTP20O75691 2785 aaKnown RBP-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 MT1AP04731 61 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 PRLHP81277 87 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 COL12A1Q99715 3063 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 COL6A5A8TX70 2615 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 CCDC168Q8NDH2 2452 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 NBEAL2Q6ZNJ1 2754 aa-0.63□□□□□ -2.51
NSMCE4A-210ENST00000483541 ANKRD36CQ5JPF3 1778 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 RALGAPBQ86X10 1494 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 DEFB131BA0A096LNP1 70 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 DEFB130BP0DP73 79 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 DEFB130AP0DP74 79 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 BVES-AS1Q5T3Y7 98 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 MGAM2Q2M2H8 2515 aa-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 RNF17Q9BXT8 1623 aaKnown RBP-0.64□□□□□ -2.51
NSMCE4A-210ENST00000483541 DNAH6Q9C0G6 4158 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms