RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 NREPQ16612 68 aa8.12□□□□□ -1.11
SEC13-216ENST00000479868 OXTP01178 125 aa8.11□□□□□ -1.11
SEC13-216ENST00000479868 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
SEC13-216ENST00000479868 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
SEC13-216ENST00000479868 A0A087WTM6 91 aa8.11□□□□□ -1.11
SEC13-216ENST00000479868 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
SEC13-216ENST00000479868 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
SEC13-216ENST00000479868 Q8NBF4 154 aa8.1□□□□□ -1.11
SEC13-216ENST00000479868 FBN3Q75N90 2809 aa8.1□□□□□ -1.11
SEC13-216ENST00000479868 Q6ZR54 194 aa8.1□□□□□ -1.11
SEC13-216ENST00000479868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
SEC13-216ENST00000479868 DNAH2Q9P225 4427 aa8.09□□□□□ -1.11
SEC13-216ENST00000479868 A0A0G2JQZ4 141 aa8.09□□□□□ -1.11
SEC13-216ENST00000479868 Q8N9L7 120 aa8.09□□□□□ -1.11
SEC13-216ENST00000479868 LINC00476Q8WZB0 136 aa8.09□□□□□ -1.11
SEC13-216ENST00000479868 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
SEC13-216ENST00000479868 F8WEM9 126 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 CYSTM1Q9H1C7 97 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 A0A1B0GW54 56 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 H0Y9J4 135 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
SEC13-216ENST00000479868 BPY2O14599 106 aa8.06□□□□□ -1.12
SEC13-216ENST00000479868 IGFL1Q6UW32 110 aa8.06□□□□□ -1.12
SEC13-216ENST00000479868 IGKV4-1P06312 121 aa8.05□□□□□ -1.12
SEC13-216ENST00000479868 UBE2AP49459 152 aa8.05□□□□□ -1.12
SEC13-216ENST00000479868 RTL8CO15255 209 aa8.04□□□□□ -1.12
SEC13-216ENST00000479868 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
SEC13-216ENST00000479868 H3BS24 57 aa8.03□□□□□ -1.12
SEC13-216ENST00000479868 BCE1O60756 84 aa8.03□□□□□ -1.12
SEC13-216ENST00000479868 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
SEC13-216ENST00000479868 SPRR1BP22528 89 aa8.01□□□□□ -1.13
SEC13-216ENST00000479868 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
SEC13-216ENST00000479868 TRAV7A0A075B6U4 112 aa8□□□□□ -1.13
SEC13-216ENST00000479868 LY6G6CO95867 125 aa8□□□□□ -1.13
SEC13-216ENST00000479868 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
SEC13-216ENST00000479868 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
SEC13-216ENST00000479868 DSCR10P59022 87 aa7.97□□□□□ -1.13
SEC13-216ENST00000479868 A0A087WSZ3 146 aa7.97□□□□□ -1.13
SEC13-216ENST00000479868 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
SEC13-216ENST00000479868 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.13
SEC13-216ENST00000479868 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
SEC13-216ENST00000479868 DNAH8Q96JB1 4490 aa7.94□□□□□ -1.14
SEC13-216ENST00000479868 K7EQZ3 153 aa7.94□□□□□ -1.14
SEC13-216ENST00000479868 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
SEC13-216ENST00000479868 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
SEC13-216ENST00000479868 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
SEC13-216ENST00000479868 OCR1Q9BZK8 76 aa7.91□□□□□ -1.14
SEC13-216ENST00000479868 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
SEC13-216ENST00000479868 SNURFQ9Y675 71 aa7.9□□□□□ -1.14
SEC13-216ENST00000479868 A0A0U1RQV1 116 aa7.9□□□□□ -1.15
SEC13-216ENST00000479868 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
SEC13-216ENST00000479868 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
SEC13-216ENST00000479868 HYDINQ4G0P3 5121 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 CD164Q04900 197 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 KRTAP21-3Q3LHN1 58 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 LINC00483Q53H64 154 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
SEC13-216ENST00000479868 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
SEC13-216ENST00000479868 PMAIP1Q13794 54 aa7.87□□□□□ -1.15
SEC13-216ENST00000479868 H7BZZ5 65 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
SEC13-216ENST00000479868 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 DNAH11Q96DT5 4516 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 ALMS1Q8TCU4 4167 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 ZNF861PO60384 105 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
SEC13-216ENST00000479868 FAM30AQ9NZY2 134 aa7.85□□□□□ -1.15
SEC13-216ENST00000479868 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
SEC13-216ENST00000479868 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
SEC13-216ENST00000479868 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
SEC13-216ENST00000479868 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
SEC13-216ENST00000479868 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
SEC13-216ENST00000479868 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.15
SEC13-216ENST00000479868 PKD1P98161 4303 aa7.82□□□□□ -1.16
SEC13-216ENST00000479868 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
SEC13-216ENST00000479868 IGLV7-43P04211 117 aa7.81□□□□□ -1.16
SEC13-216ENST00000479868 FAT2Q9NYQ8 4349 aa7.81□□□□□ -1.16
SEC13-216ENST00000479868 MOBPQ13875 183 aa7.8□□□□□ -1.16
SEC13-216ENST00000479868 FP248Q71RG6 208 aaPredicted RBP7.8□□□□□ -1.16
SEC13-216ENST00000479868 WFDC13Q8IUB5 93 aa7.8□□□□□ -1.16
SEC13-216ENST00000479868 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
SEC13-216ENST00000479868 PRR15Q8IV56 129 aa7.78□□□□□ -1.16
SEC13-216ENST00000479868 A8MWP4 228 aa7.78□□□□□ -1.16
SEC13-216ENST00000479868 LCE6AA0A183 80 aa7.77□□□□□ -1.17
SEC13-216ENST00000479868 Q96NJ1 140 aa7.77□□□□□ -1.17
SEC13-216ENST00000479868 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
SEC13-216ENST00000479868 NDUFC1O43677 76 aa7.76□□□□□ -1.17
SEC13-216ENST00000479868 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
SEC13-216ENST00000479868 Q6ZSA8 131 aa7.75□□□□□ -1.17
SEC13-216ENST00000479868 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
SEC13-216ENST00000479868 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
SEC13-216ENST00000479868 MMP24-AS1A0A0U1RRL7 71 aa7.7□□□□□ -1.18
SEC13-216ENST00000479868 NDUFB1O75438 58 aa7.69□□□□□ -1.18
SEC13-216ENST00000479868 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
SEC13-216ENST00000479868 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
SEC13-216ENST00000479868 PKHD1P08F94 4074 aa7.66□□□□□ -1.18
SEC13-216ENST00000479868 hDV103S1A0JD37 113 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms