RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 SMIM26A0A096LP01 95 aa13.21□□□□□ -0.29
SMIM11A-204ENST00000474455 KRTAP10-2P60368 255 aa13.21□□□□□ -0.3
SMIM11A-204ENST00000474455 PLA2G2DQ9UNK4 145 aa13.2□□□□□ -0.3
SMIM11A-204ENST00000474455 C9orf163Q8N9P6 203 aa13.19□□□□□ -0.3
SMIM11A-204ENST00000474455 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
SMIM11A-204ENST00000474455 TMEM254Q8TBM7 123 aa13.19□□□□□ -0.3
SMIM11A-204ENST00000474455 IGLV5-48A0A075B6I7 105 aa13.19□□□□□ -0.3
SMIM11A-204ENST00000474455 DHRS4-AS1Q9P1J3 65 aa13.19□□□□□ -0.3
SMIM11A-204ENST00000474455 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
SMIM11A-204ENST00000474455 OCR1Q9BZK8 76 aa13.15□□□□□ -0.3
SMIM11A-204ENST00000474455 DNAH8Q96JB1 4490 aa13.15□□□□□ -0.3
SMIM11A-204ENST00000474455 A0A096LNI7 61 aa13.14□□□□□ -0.31
SMIM11A-204ENST00000474455 Q8N377 158 aa13.14□□□□□ -0.31
SMIM11A-204ENST00000474455 C7orf33Q8WU49 177 aa13.14□□□□□ -0.31
SMIM11A-204ENST00000474455 IGLV5-37A0A075B6J1 123 aa13.13□□□□□ -0.31
SMIM11A-204ENST00000474455 IGLV5-52A0A0A0MRZ9 124 aa13.13□□□□□ -0.31
SMIM11A-204ENST00000474455 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
SMIM11A-204ENST00000474455 PRYO14603 147 aa13.13□□□□□ -0.31
SMIM11A-204ENST00000474455 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
SMIM11A-204ENST00000474455 A0A0U1RQV1 116 aa13.12□□□□□ -0.31
SMIM11A-204ENST00000474455 PANO1I0J062 215 aa13.12□□□□□ -0.31
SMIM11A-204ENST00000474455 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
SMIM11A-204ENST00000474455 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
SMIM11A-204ENST00000474455 Q6ZRX8 168 aa13.09□□□□□ -0.31
SMIM11A-204ENST00000474455 Q8N9L7 120 aa13.09□□□□□ -0.31
SMIM11A-204ENST00000474455 LRP1BQ9NZR2 4599 aa13.09□□□□□ -0.31
SMIM11A-204ENST00000474455 DYNC1H1Q14204 4646 aaKnown RBP13.08□□□□□ -0.32
SMIM11A-204ENST00000474455 C16orf90A8MZG2 172 aa13.08□□□□□ -0.32
SMIM11A-204ENST00000474455 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
SMIM11A-204ENST00000474455 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
SMIM11A-204ENST00000474455 SPRR1AP35321 89 aa13.07□□□□□ -0.32
SMIM11A-204ENST00000474455 LINC00336Q6ZUF6 198 aa13.07□□□□□ -0.32
SMIM11A-204ENST00000474455 KRTAP4-16G5E9R7 235 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-204ENST00000474455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-204ENST00000474455 FP248Q71RG6 208 aaPredicted RBP13.05□□□□□ -0.32
SMIM11A-204ENST00000474455 A0A1B0GVY2 172 aa13.04□□□□□ -0.32
SMIM11A-204ENST00000474455 IGLV1-50A0A075B6I6 118 aa13.04□□□□□ -0.32
SMIM11A-204ENST00000474455 ETDCA0A1B0GVM5 59 aa13.04□□□□□ -0.32
SMIM11A-204ENST00000474455 A0A1W2PNN7 141 aa13.04□□□□□ -0.32
SMIM11A-204ENST00000474455 Q8NBF4 154 aa13.03□□□□□ -0.32
SMIM11A-204ENST00000474455 A0A1W2PNM2 257 aa13.02□□□□□ -0.32
SMIM11A-204ENST00000474455 C1orf137Q5JT78 98 aa13.02□□□□□ -0.33
SMIM11A-204ENST00000474455 SPRR4Q96PI1 79 aa13.02□□□□□ -0.33
SMIM11A-204ENST00000474455 Q9BRP9 147 aa13.01□□□□□ -0.33
SMIM11A-204ENST00000474455 KRTAP10-1P60331 282 aa13□□□□□ -0.33
SMIM11A-204ENST00000474455 FAM30AQ9NZY2 134 aa12.99□□□□□ -0.33
SMIM11A-204ENST00000474455 PRO0628Q9UI54 55 aa12.99□□□□□ -0.33
SMIM11A-204ENST00000474455 SPACA4Q8TDM5 124 aa12.98□□□□□ -0.33
SMIM11A-204ENST00000474455 RPL37AP8A6NKH3 93 aa12.95□□□□□ -0.34
SMIM11A-204ENST00000474455 SMIM29Q86T20 159 aa12.95□□□□□ -0.34
SMIM11A-204ENST00000474455 HIGD2AQ9BW72 106 aa12.94□□□□□ -0.34
SMIM11A-204ENST00000474455 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
SMIM11A-204ENST00000474455 LINC00474Q9P2X8 69 aa12.92□□□□□ -0.34
SMIM11A-204ENST00000474455 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
SMIM11A-204ENST00000474455 EPPK1P58107 5090 aaKnown RBP12.92□□□□□ -0.34
SMIM11A-204ENST00000474455 PHF5AQ7RTV0 110 aaKnown RBP12.91□□□□□ -0.34
SMIM11A-204ENST00000474455 ST20-AS1Q8NBB2 130 aa12.91□□□□□ -0.34
SMIM11A-204ENST00000474455 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
SMIM11A-204ENST00000474455 DSCR10P59022 87 aa12.89□□□□□ -0.35
SMIM11A-204ENST00000474455 KRTAP11-1Q8IUC1 163 aa12.88□□□□□ -0.35
SMIM11A-204ENST00000474455 UBE2BP63146 152 aa12.87□□□□□ -0.35
SMIM11A-204ENST00000474455 Q6ZSA8 131 aa12.87□□□□□ -0.35
SMIM11A-204ENST00000474455 ZCCHC13Q8WW36 166 aaKnown RBP12.87□□□□□ -0.35
SMIM11A-204ENST00000474455 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
SMIM11A-204ENST00000474455 CIRBP-AS1Q8TBR5 109 aa12.85□□□□□ -0.35
SMIM11A-204ENST00000474455 PLAC8Q9NZF1 115 aa12.85□□□□□ -0.35
SMIM11A-204ENST00000474455 FAM229BQ4G0N7 80 aa12.82□□□□□ -0.36
SMIM11A-204ENST00000474455 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
SMIM11A-204ENST00000474455 K7EQZ3 153 aa12.81□□□□□ -0.36
SMIM11A-204ENST00000474455 IGLV8-61A0A075B6I0 122 aa12.8□□□□□ -0.36
SMIM11A-204ENST00000474455 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
SMIM11A-204ENST00000474455 VPS13BQ7Z7G8 4022 aa12.79□□□□□ -0.36
SMIM11A-204ENST00000474455 NDUFB1O75438 58 aa12.74□□□□□ -0.37
SMIM11A-204ENST00000474455 IGFL1Q6UW32 110 aa12.74□□□□□ -0.37
SMIM11A-204ENST00000474455 MPLKIPQ8TAP9 179 aa12.74□□□□□ -0.37
SMIM11A-204ENST00000474455 CYP4F30PQ9H0H9 118 aa12.74□□□□□ -0.37
SMIM11A-204ENST00000474455 FAT1Q14517 4588 aa12.74□□□□□ -0.37
SMIM11A-204ENST00000474455 Q1T7F1 81 aa12.7□□□□□ -0.38
SMIM11A-204ENST00000474455 BRK1Q8WUW1 75 aa12.69□□□□□ -0.38
SMIM11A-204ENST00000474455 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
SMIM11A-204ENST00000474455 HSPG2P98160 4391 aa12.69□□□□□ -0.38
SMIM11A-204ENST00000474455 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
SMIM11A-204ENST00000474455 PSORS1C2Q9UIG4 136 aa12.68□□□□□ -0.38
SMIM11A-204ENST00000474455 MP68P56378 58 aa12.68□□□□□ -0.38
SMIM11A-204ENST00000474455 RYR1P21817 5038 aa12.67□□□□□ -0.38
SMIM11A-204ENST00000474455 H3BPC8 53 aa12.65□□□□□ -0.38
SMIM11A-204ENST00000474455 SMR3BP02814 79 aaPredicted RBP12.65□□□□□ -0.38
SMIM11A-204ENST00000474455 KIAA1109Q2LD37 5005 aa12.65□□□□□ -0.38
SMIM11A-204ENST00000474455 SPRR1BP22528 89 aa12.64□□□□□ -0.39
SMIM11A-204ENST00000474455 PRLHP81277 87 aa12.64□□□□□ -0.39
SMIM11A-204ENST00000474455 A0A087WSZ3 146 aa12.63□□□□□ -0.39
SMIM11A-204ENST00000474455 H0Y9J4 135 aa12.63□□□□□ -0.39
SMIM11A-204ENST00000474455 UBE2AP49459 152 aa12.63□□□□□ -0.39
SMIM11A-204ENST00000474455 KRTAP29-1A8MX34 341 aaPredicted RBP12.61□□□□□ -0.39
SMIM11A-204ENST00000474455 TRAV22A0A0B4J277 110 aa12.6□□□□□ -0.39
SMIM11A-204ENST00000474455 WFDC13Q8IUB5 93 aa12.59□□□□□ -0.39
SMIM11A-204ENST00000474455 SPANXA2-OT1Q8N9U9 137 aa12.57□□□□□ -0.4
SMIM11A-204ENST00000474455 V9GYY9 64 aa12.57□□□□□ -0.4
SMIM11A-204ENST00000474455 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
SMIM11A-204ENST00000474455 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms