RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
APLF-204ENST00000471727 A0A087WTM6 91 aa6.61□□□□□ -1.35
APLF-204ENST00000471727 H7BZZ5 65 aa6.6□□□□□ -1.35
APLF-204ENST00000471727 DSCR10P59022 87 aa6.6□□□□□ -1.35
APLF-204ENST00000471727 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
APLF-204ENST00000471727 FAM236DA0A1B0GTK5 79 aa6.59□□□□□ -1.35
APLF-204ENST00000471727 FAM236CP0DP71 79 aa6.59□□□□□ -1.35
APLF-204ENST00000471727 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.35
APLF-204ENST00000471727 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
APLF-204ENST00000471727 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
APLF-204ENST00000471727 KRTAP11-1Q8IUC1 163 aa6.58□□□□□ -1.36
APLF-204ENST00000471727 TMEM254Q8TBM7 123 aa6.58□□□□□ -1.36
APLF-204ENST00000471727 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
APLF-204ENST00000471727 DNAH10Q8IVF4 4471 aa6.58□□□□□ -1.36
APLF-204ENST00000471727 Q6ZR54 194 aa6.58□□□□□ -1.36
APLF-204ENST00000471727 A0A087WSZ3 146 aa6.57□□□□□ -1.36
APLF-204ENST00000471727 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
APLF-204ENST00000471727 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
APLF-204ENST00000471727 SNURFQ9Y675 71 aa6.56□□□□□ -1.36
APLF-204ENST00000471727 DNAH7Q8WXX0 4024 aa6.56□□□□□ -1.36
APLF-204ENST00000471727 HCG22E2RYF7 251 aa6.55□□□□□ -1.36
APLF-204ENST00000471727 VPS13DQ5THJ4 4388 aa6.55□□□□□ -1.36
APLF-204ENST00000471727 A0A0U1RQV1 116 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 LCE6AA0A183 80 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 PANO1I0J062 215 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 K7EQZ3 153 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 RTL8CO15255 209 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
APLF-204ENST00000471727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
APLF-204ENST00000471727 LYSTQ99698 3801 aa6.53□□□□□ -1.36
APLF-204ENST00000471727 LINC00483Q53H64 154 aa6.53□□□□□ -1.36
APLF-204ENST00000471727 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
APLF-204ENST00000471727 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
APLF-204ENST00000471727 CSMD3Q7Z407 3707 aa6.51□□□□□ -1.37
APLF-204ENST00000471727 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
APLF-204ENST00000471727 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
APLF-204ENST00000471727 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
APLF-204ENST00000471727 A0A0G2JQZ4 141 aa6.5□□□□□ -1.37
APLF-204ENST00000471727 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
APLF-204ENST00000471727 A8MWP4 228 aa6.49□□□□□ -1.37
APLF-204ENST00000471727 PRR15Q8IV56 129 aa6.49□□□□□ -1.37
APLF-204ENST00000471727 ZNF861PO60384 105 aa6.48□□□□□ -1.37
APLF-204ENST00000471727 NDUFB1O75438 58 aa6.47□□□□□ -1.37
APLF-204ENST00000471727 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
APLF-204ENST00000471727 PRKDCP78527 4128 aaKnown RBP6.47□□□□□ -1.37
APLF-204ENST00000471727 STARD9Q9P2P6 4700 aa6.47□□□□□ -1.37
APLF-204ENST00000471727 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
APLF-204ENST00000471727 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
APLF-204ENST00000471727 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.38
APLF-204ENST00000471727 H3BPC8 53 aa6.46□□□□□ -1.38
APLF-204ENST00000471727 J3QL48 77 aa6.46□□□□□ -1.38
APLF-204ENST00000471727 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.38
APLF-204ENST00000471727 MP68P56378 58 aa6.45□□□□□ -1.38
APLF-204ENST00000471727 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
APLF-204ENST00000471727 OXTP01178 125 aa6.44□□□□□ -1.38
APLF-204ENST00000471727 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
APLF-204ENST00000471727 ZCCHC13Q8WW36 166 aaKnown RBP6.44□□□□□ -1.38
APLF-204ENST00000471727 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
APLF-204ENST00000471727 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 WWC2-AS2Q96NR7 200 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 LY6G6CO95867 125 aa6.43□□□□□ -1.38
APLF-204ENST00000471727 DNAH6Q9C0G6 4158 aa6.42□□□□□ -1.38
APLF-204ENST00000471727 DNAH17Q9UFH2 4485 aa6.42□□□□□ -1.38
APLF-204ENST00000471727 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
APLF-204ENST00000471727 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
APLF-204ENST00000471727 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.38
APLF-204ENST00000471727 MOBPQ13875 183 aa6.39□□□□□ -1.39
APLF-204ENST00000471727 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
APLF-204ENST00000471727 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
APLF-204ENST00000471727 MMP24-AS1A0A0U1RRL7 71 aa6.38□□□□□ -1.39
APLF-204ENST00000471727 CD164Q04900 197 aa6.38□□□□□ -1.39
APLF-204ENST00000471727 Q96NJ1 140 aa6.38□□□□□ -1.39
APLF-204ENST00000471727 TP53AIP1Q9HCN2 124 aa6.38□□□□□ -1.39
APLF-204ENST00000471727 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
APLF-204ENST00000471727 Q5XG85 94 aa6.37□□□□□ -1.39
APLF-204ENST00000471727 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
APLF-204ENST00000471727 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
APLF-204ENST00000471727 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
APLF-204ENST00000471727 MEGF8Q7Z7M0 2845 aa6.36□□□□□ -1.39
APLF-204ENST00000471727 H0Y9P7 68 aa6.36□□□□□ -1.39
APLF-204ENST00000471727 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
APLF-204ENST00000471727 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
APLF-204ENST00000471727 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
APLF-204ENST00000471727 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
APLF-204ENST00000471727 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
APLF-204ENST00000471727 KMT2AQ03164 3969 aa6.34□□□□□ -1.39
APLF-204ENST00000471727 HRCT1Q6UXD1 115 aa6.33□□□□□ -1.4
APLF-204ENST00000471727 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
APLF-204ENST00000471727 Q6ZSA8 131 aa6.32□□□□□ -1.4
APLF-204ENST00000471727 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
APLF-204ENST00000471727 SRRM2Q9UQ35 2752 aaKnown RBP6.31□□□□□ -1.4
APLF-204ENST00000471727 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
APLF-204ENST00000471727 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
APLF-204ENST00000471727 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
APLF-204ENST00000471727 FP248Q71RG6 208 aaPredicted RBP6.3□□□□□ -1.4
APLF-204ENST00000471727 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms