RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
NUP50-214ENST00000469163 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
NUP50-214ENST00000469163 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
NUP50-214ENST00000469163 COX7BP24311 80 aa6.55□□□□□ -1.36
NUP50-214ENST00000469163 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
NUP50-214ENST00000469163 SPAG11AQ6PDA7 123 aa6.55□□□□□ -1.36
NUP50-214ENST00000469163 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
NUP50-214ENST00000469163 SPAG11BQ08648 103 aa6.54□□□□□ -1.36
NUP50-214ENST00000469163 SPINK7P58062 85 aa6.53□□□□□ -1.36
NUP50-214ENST00000469163 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
NUP50-214ENST00000469163 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
NUP50-214ENST00000469163 H0Y9J4 135 aa6.52□□□□□ -1.37
NUP50-214ENST00000469163 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
NUP50-214ENST00000469163 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
NUP50-214ENST00000469163 ELOF1P60002 83 aaKnown RBP6.5□□□□□ -1.37
NUP50-214ENST00000469163 EGFEM1PQ0D2K5 195 aa6.5□□□□□ -1.37
NUP50-214ENST00000469163 UNQ6190/PRO20217Q6UXQ8 127 aa6.5□□□□□ -1.37
NUP50-214ENST00000469163 LCE6AA0A183 80 aa6.49□□□□□ -1.37
NUP50-214ENST00000469163 LELP1Q5T871 98 aa6.48□□□□□ -1.37
NUP50-214ENST00000469163 COA5Q86WW8 74 aa6.48□□□□□ -1.37
NUP50-214ENST00000469163 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
NUP50-214ENST00000469163 H3BQ85 93 aa6.46□□□□□ -1.37
NUP50-214ENST00000469163 Q9BRP9 147 aa6.46□□□□□ -1.37
NUP50-214ENST00000469163 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.38
NUP50-214ENST00000469163 WFDC13Q8IUB5 93 aa6.46□□□□□ -1.38
NUP50-214ENST00000469163 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
NUP50-214ENST00000469163 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
NUP50-214ENST00000469163 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
NUP50-214ENST00000469163 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
NUP50-214ENST00000469163 KIAA0087Q14695 138 aa6.43□□□□□ -1.38
NUP50-214ENST00000469163 DNAH10OSP0CZ25 163 aa6.43□□□□□ -1.38
NUP50-214ENST00000469163 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
NUP50-214ENST00000469163 K7EQZ3 153 aa6.42□□□□□ -1.38
NUP50-214ENST00000469163 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
NUP50-214ENST00000469163 Q8NDZ9 215 aa6.41□□□□□ -1.38
NUP50-214ENST00000469163 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.38
NUP50-214ENST00000469163 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.39
NUP50-214ENST00000469163 H0Y9P7 68 aa6.39□□□□□ -1.39
NUP50-214ENST00000469163 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
NUP50-214ENST00000469163 A0A096LNI7 61 aa6.37□□□□□ -1.39
NUP50-214ENST00000469163 A0A1W2PNM2 257 aa6.37□□□□□ -1.39
NUP50-214ENST00000469163 Q8IZM0 81 aa6.37□□□□□ -1.39
NUP50-214ENST00000469163 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
NUP50-214ENST00000469163 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
NUP50-214ENST00000469163 PCOTHQ58A44 107 aa6.36□□□□□ -1.39
NUP50-214ENST00000469163 Q6ZR54 194 aa6.35□□□□□ -1.39
NUP50-214ENST00000469163 DSCR10P59022 87 aa6.34□□□□□ -1.39
NUP50-214ENST00000469163 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
NUP50-214ENST00000469163 NUPR2A6NF83 97 aa6.34□□□□□ -1.39
NUP50-214ENST00000469163 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
NUP50-214ENST00000469163 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
NUP50-214ENST00000469163 COX17Q14061 63 aa6.33□□□□□ -1.4
NUP50-214ENST00000469163 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
NUP50-214ENST00000469163 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
NUP50-214ENST00000469163 LYSTQ99698 3801 aa6.3□□□□□ -1.4
NUP50-214ENST00000469163 LINC01556Q5JQF7 62 aa6.3□□□□□ -1.4
NUP50-214ENST00000469163 RTL8CO15255 209 aa6.29□□□□□ -1.4
NUP50-214ENST00000469163 ROMO1P60602 79 aa6.29□□□□□ -1.4
NUP50-214ENST00000469163 PRKDCP78527 4128 aaKnown RBP6.28□□□□□ -1.4
NUP50-214ENST00000469163 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
NUP50-214ENST00000469163 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
NUP50-214ENST00000469163 APLNQ9ULZ1 77 aa6.27□□□□□ -1.41
NUP50-214ENST00000469163 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
NUP50-214ENST00000469163 IGLV1-50A0A075B6I6 118 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 PLAC8Q9NZF1 115 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
NUP50-214ENST00000469163 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 WWC2-AS2Q96NR7 200 aa6.26□□□□□ -1.41
NUP50-214ENST00000469163 H3BPC8 53 aa6.25□□□□□ -1.41
NUP50-214ENST00000469163 C15orf56Q8N910 161 aa6.25□□□□□ -1.41
NUP50-214ENST00000469163 C9orf163Q8N9P6 203 aa6.25□□□□□ -1.41
NUP50-214ENST00000469163 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
NUP50-214ENST00000469163 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
NUP50-214ENST00000469163 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
NUP50-214ENST00000469163 C7orf33Q8WU49 177 aa6.23□□□□□ -1.41
NUP50-214ENST00000469163 PRLHP81277 87 aa6.23□□□□□ -1.41
NUP50-214ENST00000469163 Q8NBF4 154 aa6.23□□□□□ -1.41
NUP50-214ENST00000469163 PRR34Q9NV39 138 aa6.22□□□□□ -1.41
NUP50-214ENST00000469163 IGLV5-52A0A0A0MRZ9 124 aa6.22□□□□□ -1.41
NUP50-214ENST00000469163 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.41
NUP50-214ENST00000469163 Q8N377 158 aa6.21□□□□□ -1.42
NUP50-214ENST00000469163 DNAH9Q9NYC9 4486 aa6.21□□□□□ -1.42
NUP50-214ENST00000469163 H3BNG1 76 aa6.21□□□□□ -1.42
NUP50-214ENST00000469163 TNP2Q05952 138 aa6.2□□□□□ -1.42
NUP50-214ENST00000469163 IGLV5-48A0A075B6I7 105 aa6.19□□□□□ -1.42
NUP50-214ENST00000469163 SMR3BP02814 79 aaPredicted RBP6.19□□□□□ -1.42
NUP50-214ENST00000469163 HRES1P13985 223 aa6.19□□□□□ -1.42
NUP50-214ENST00000469163 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
NUP50-214ENST00000469163 A0A1B0GW54 56 aa6.18□□□□□ -1.42
NUP50-214ENST00000469163 A0A1W2PNN7 141 aa6.18□□□□□ -1.42
NUP50-214ENST00000469163 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
NUP50-214ENST00000469163 A0A1B0GU69 56 aa6.16□□□□□ -1.42
NUP50-214ENST00000469163 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.42
NUP50-214ENST00000469163 ANAPC11Q9NYG5 84 aa6.15□□□□□ -1.43
NUP50-214ENST00000469163 A0A087WSZ3 146 aa6.14□□□□□ -1.43
NUP50-214ENST00000469163 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
NUP50-214ENST00000469163 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
NUP50-214ENST00000469163 PANO1I0J062 215 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms