RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 Q96NJ1 140 aa5.01□□□□□ -1.61
HDAC3-203ENST00000467533 RBM12B-AS1Q9P1G2 102 aa5.01□□□□□ -1.61
HDAC3-203ENST00000467533 TEX49A0A1B0GTD5 131 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 MYMXA0A1B0GTQ4 84 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 NDUFC2O95298 119 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
HDAC3-203ENST00000467533 PYY3Q5JQD4 70 aa4.99□□□□□ -1.61
HDAC3-203ENST00000467533 IGFL1Q6UW32 110 aa4.98□□□□□ -1.61
HDAC3-203ENST00000467533 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-203ENST00000467533 HERVK_113P61574 105 aa4.97□□□□□ -1.61
HDAC3-203ENST00000467533 Q6ZVH6 145 aa4.97□□□□□ -1.61
HDAC3-203ENST00000467533 HSBP1L1C9JCN9 74 aa4.96□□□□□ -1.62
HDAC3-203ENST00000467533 SMIM6P0DI80 62 aa4.96□□□□□ -1.62
HDAC3-203ENST00000467533 NPC2P61916 151 aa4.96□□□□□ -1.62
HDAC3-203ENST00000467533 ATOH7Q8N100 152 aa4.96□□□□□ -1.62
HDAC3-203ENST00000467533 A8MUU9 505 aa4.95□□□□□ -1.62
HDAC3-203ENST00000467533 E9PLD3 99 aa4.95□□□□□ -1.62
HDAC3-203ENST00000467533 COX7BP24311 80 aa4.95□□□□□ -1.62
HDAC3-203ENST00000467533 OR13C6PQ8NH95 151 aa4.95□□□□□ -1.62
HDAC3-203ENST00000467533 LEPROTO15243 131 aa4.94□□□□□ -1.62
HDAC3-203ENST00000467533 ELOF1P60002 83 aaKnown RBP4.94□□□□□ -1.62
HDAC3-203ENST00000467533 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
HDAC3-203ENST00000467533 J3QQQ9 107 aa4.93□□□□□ -1.62
HDAC3-203ENST00000467533 HRES1P13985 223 aa4.93□□□□□ -1.62
HDAC3-203ENST00000467533 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
HDAC3-203ENST00000467533 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
HDAC3-203ENST00000467533 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
HDAC3-203ENST00000467533 A8MWP4 228 aa4.92□□□□□ -1.62
HDAC3-203ENST00000467533 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
HDAC3-203ENST00000467533 NMUP48645 174 aa4.92□□□□□ -1.62
HDAC3-203ENST00000467533 SPATA45Q537H7 98 aa4.92□□□□□ -1.62
HDAC3-203ENST00000467533 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
HDAC3-203ENST00000467533 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
HDAC3-203ENST00000467533 C12orf57Q99622 126 aa4.91□□□□□ -1.62
HDAC3-203ENST00000467533 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
HDAC3-203ENST00000467533 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
HDAC3-203ENST00000467533 A6NN06 94 aa4.9□□□□□ -1.63
HDAC3-203ENST00000467533 DLEU1O43261 78 aa4.9□□□□□ -1.63
HDAC3-203ENST00000467533 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
HDAC3-203ENST00000467533 COX8AP10176 69 aa4.9□□□□□ -1.63
HDAC3-203ENST00000467533 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
HDAC3-203ENST00000467533 ZNF815PA8K554 130 aa4.89□□□□□ -1.63
HDAC3-203ENST00000467533 F8WEM9 126 aa4.89□□□□□ -1.63
HDAC3-203ENST00000467533 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
HDAC3-203ENST00000467533 MTURNQ8N3F0 131 aa4.88□□□□□ -1.63
HDAC3-203ENST00000467533 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
HDAC3-203ENST00000467533 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
HDAC3-203ENST00000467533 KMT2DO14686 5537 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 LST1O00453 97 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 TIMM17BO60830 172 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 SCGB1D4Q6XE38 83 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 SPANXDQ9BXN6 97 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 SPANXCQ9NY87 97 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 UQCR10Q9UDW1 63 aa4.86□□□□□ -1.63
HDAC3-203ENST00000467533 TSTD3H0UI37 97 aa4.85□□□□□ -1.63
HDAC3-203ENST00000467533 CLEC2BQ92478 149 aa4.85□□□□□ -1.63
HDAC3-203ENST00000467533 HIGD1BQ9P298 99 aa4.85□□□□□ -1.63
HDAC3-203ENST00000467533 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
HDAC3-203ENST00000467533 LITAFQ99732 161 aa4.84□□□□□ -1.63
HDAC3-203ENST00000467533 DSCR10P59022 87 aa4.83□□□□□ -1.64
HDAC3-203ENST00000467533 C2orf91Q6ZV80 131 aa4.83□□□□□ -1.64
HDAC3-203ENST00000467533 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
HDAC3-203ENST00000467533 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
HDAC3-203ENST00000467533 A0A1B0GWB2 263 aa4.82□□□□□ -1.64
HDAC3-203ENST00000467533 IFITM1P13164 125 aa4.82□□□□□ -1.64
HDAC3-203ENST00000467533 Q6JHZ5 121 aa4.82□□□□□ -1.64
HDAC3-203ENST00000467533 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
HDAC3-203ENST00000467533 COPS9Q8WXC6 57 aa4.81□□□□□ -1.64
HDAC3-203ENST00000467533 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
HDAC3-203ENST00000467533 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
HDAC3-203ENST00000467533 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
HDAC3-203ENST00000467533 GHRHP01286 108 aa4.79□□□□□ -1.64
HDAC3-203ENST00000467533 HSD52Q0P140 79 aa4.79□□□□□ -1.64
HDAC3-203ENST00000467533 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
HDAC3-203ENST00000467533 NHP2Q9NX24 153 aaKnown RBP4.79□□□□□ -1.64
HDAC3-203ENST00000467533 PCP4P48539 62 aa4.78□□□□□ -1.64
HDAC3-203ENST00000467533 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 SPRR2EP22531 72 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 SPRR2BP35325 72 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 SPRR2AP35326 72 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 CEND1Q8N111 149 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
HDAC3-203ENST00000467533 M0R143 59 aa4.76□□□□□ -1.65
HDAC3-203ENST00000467533 A4D1N5 150 aa4.75□□□□□ -1.65
HDAC3-203ENST00000467533 FXYD2P54710 66 aa4.74□□□□□ -1.65
HDAC3-203ENST00000467533 BVES-AS1Q5T3Y7 98 aa4.74□□□□□ -1.65
HDAC3-203ENST00000467533 PCP4L1A6NKN8 68 aa4.73□□□□□ -1.65
HDAC3-203ENST00000467533 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
HDAC3-203ENST00000467533 OCIAD2Q56VL3 154 aa4.73□□□□□ -1.65
HDAC3-203ENST00000467533 SIGMAR1Q99720 223 aa4.73□□□□□ -1.65
HDAC3-203ENST00000467533 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
HDAC3-203ENST00000467533 A6NDN8 102 aa4.72□□□□□ -1.65
HDAC3-203ENST00000467533 LINC00313P59037 77 aa4.72□□□□□ -1.65
HDAC3-203ENST00000467533 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
HDAC3-203ENST00000467533 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
HDAC3-203ENST00000467533 MT1BP07438 61 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms