RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
CXCR4-203ENST00000466288 C9JAW5 83 aa8.26□□□□□ -1.09
CXCR4-203ENST00000466288 ETDBQ3ZM63 59 aa8.26□□□□□ -1.09
CXCR4-203ENST00000466288 ASB16-AS1Q495Z4 193 aa8.26□□□□□ -1.09
CXCR4-203ENST00000466288 A0A1B0GX51 115 aa8.26□□□□□ -1.09
CXCR4-203ENST00000466288 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
CXCR4-203ENST00000466288 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
CXCR4-203ENST00000466288 OR13C6PQ8NH95 151 aa8.24□□□□□ -1.09
CXCR4-203ENST00000466288 SMIM11BQ8TCY0 68 aa8.24□□□□□ -1.09
CXCR4-203ENST00000466288 LINC00167Q96N53 147 aa8.24□□□□□ -1.09
CXCR4-203ENST00000466288 SNCGO76070 127 aa8.23□□□□□ -1.09
CXCR4-203ENST00000466288 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
CXCR4-203ENST00000466288 UBE2AP49459 152 aa8.2□□□□□ -1.1
CXCR4-203ENST00000466288 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
CXCR4-203ENST00000466288 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
CXCR4-203ENST00000466288 FP248Q71RG6 208 aaPredicted RBP8.19□□□□□ -1.1
CXCR4-203ENST00000466288 DNAL4O96015 105 aa8.19□□□□□ -1.1
CXCR4-203ENST00000466288 MTURNQ8N3F0 131 aa8.19□□□□□ -1.1
CXCR4-203ENST00000466288 VPS25Q9BRG1 176 aa8.19□□□□□ -1.1
CXCR4-203ENST00000466288 H3BQ85 93 aa8.18□□□□□ -1.1
CXCR4-203ENST00000466288 IGLV6-57P01721 117 aa8.18□□□□□ -1.1
CXCR4-203ENST00000466288 TRBV7-6A0A0J9YX20 115 aa8.17□□□□□ -1.1
CXCR4-203ENST00000466288 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
CXCR4-203ENST00000466288 M0R378 163 aa8.16□□□□□ -1.1
CXCR4-203ENST00000466288 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
CXCR4-203ENST00000466288 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
CXCR4-203ENST00000466288 GHRHP01286 108 aa8.14□□□□□ -1.11
CXCR4-203ENST00000466288 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
CXCR4-203ENST00000466288 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
CXCR4-203ENST00000466288 VPREB1P12018 145 aa8.13□□□□□ -1.11
CXCR4-203ENST00000466288 PRLHP81277 87 aa8.13□□□□□ -1.11
CXCR4-203ENST00000466288 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
CXCR4-203ENST00000466288 NCR3O14931 201 aa8.13□□□□□ -1.11
CXCR4-203ENST00000466288 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
CXCR4-203ENST00000466288 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
CXCR4-203ENST00000466288 XP32Q5T750 250 aa8.11□□□□□ -1.11
CXCR4-203ENST00000466288 Q8NDZ9 215 aa8.11□□□□□ -1.11
CXCR4-203ENST00000466288 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
CXCR4-203ENST00000466288 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 ACYP1P07311 99 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 MT1HP80294 61 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
CXCR4-203ENST00000466288 TMEM256-PLSCR3K7ERE1 68 aa8.09□□□□□ -1.11
CXCR4-203ENST00000466288 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
CXCR4-203ENST00000466288 TRBV10-3A0A0K0K1G6 114 aa8.08□□□□□ -1.12
CXCR4-203ENST00000466288 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
CXCR4-203ENST00000466288 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
CXCR4-203ENST00000466288 hADV29S1A0JD25 119 aa8.06□□□□□ -1.12
CXCR4-203ENST00000466288 SIGMAR1Q99720 223 aa8.06□□□□□ -1.12
CXCR4-203ENST00000466288 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
CXCR4-203ENST00000466288 C21orf62-AS1Q17RA5 79 aa8.06□□□□□ -1.12
CXCR4-203ENST00000466288 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
CXCR4-203ENST00000466288 COX7BP24311 80 aa8.05□□□□□ -1.12
CXCR4-203ENST00000466288 ELOF1P60002 83 aaKnown RBP8.05□□□□□ -1.12
CXCR4-203ENST00000466288 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
CXCR4-203ENST00000466288 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-203ENST00000466288 Q8NBF4 154 aa8.03□□□□□ -1.12
CXCR4-203ENST00000466288 SPRR4Q96PI1 79 aa8.03□□□□□ -1.12
CXCR4-203ENST00000466288 PRYO14603 147 aa8.02□□□□□ -1.13
CXCR4-203ENST00000466288 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
CXCR4-203ENST00000466288 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
CXCR4-203ENST00000466288 SPINK1P00995 79 aa8.01□□□□□ -1.13
CXCR4-203ENST00000466288 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
CXCR4-203ENST00000466288 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
CXCR4-203ENST00000466288 PDE6GP18545 87 aa7.99□□□□□ -1.13
CXCR4-203ENST00000466288 SPRR1AP35321 89 aa7.98□□□□□ -1.13
CXCR4-203ENST00000466288 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
CXCR4-203ENST00000466288 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
CXCR4-203ENST00000466288 Q8N377 158 aa7.96□□□□□ -1.13
CXCR4-203ENST00000466288 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-203ENST00000466288 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
CXCR4-203ENST00000466288 Q6ZQY7 126 aa7.94□□□□□ -1.14
CXCR4-203ENST00000466288 CCKP06307 115 aa7.94□□□□□ -1.14
CXCR4-203ENST00000466288 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
CXCR4-203ENST00000466288 Q6Q795 121 aa7.94□□□□□ -1.14
CXCR4-203ENST00000466288 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
CXCR4-203ENST00000466288 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
CXCR4-203ENST00000466288 KRTAP4-16G5E9R7 235 aaPredicted RBP7.93□□□□□ -1.14
CXCR4-203ENST00000466288 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
CXCR4-203ENST00000466288 Q6ZRX8 168 aa7.93□□□□□ -1.14
CXCR4-203ENST00000466288 LINC00643Q86TS7 51 aa7.92□□□□□ -1.14
CXCR4-203ENST00000466288 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
CXCR4-203ENST00000466288 C14orf132Q9NPU4 83 aa7.92□□□□□ -1.14
CXCR4-203ENST00000466288 B5MCH6 92 aa7.91□□□□□ -1.14
CXCR4-203ENST00000466288 GAGE2AQ6NT46 116 aa7.91□□□□□ -1.14
CXCR4-203ENST00000466288 LAMTOR3Q9UHA4 124 aa7.91□□□□□ -1.14
CXCR4-203ENST00000466288 LINC00483Q53H64 154 aa7.9□□□□□ -1.14
CXCR4-203ENST00000466288 PCP4P48539 62 aa7.89□□□□□ -1.15
CXCR4-203ENST00000466288 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
CXCR4-203ENST00000466288 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
CXCR4-203ENST00000466288 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
CXCR4-203ENST00000466288 USH2AO75445 5202 aa7.88□□□□□ -1.15
CXCR4-203ENST00000466288 IGLV8-61A0A075B6I0 122 aa7.88□□□□□ -1.15
CXCR4-203ENST00000466288 MT-ATP8P03928 68 aa7.88□□□□□ -1.15
CXCR4-203ENST00000466288 SMCR5Q8TEV8 140 aa7.88□□□□□ -1.15
CXCR4-203ENST00000466288 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
CXCR4-203ENST00000466288 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
CXCR4-203ENST00000466288 MOBPQ13875 183 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms