RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 DIP2BQ9P265 1576 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 ABCC3O15438 1527 aa-0.84□□□□□ -2.54
NUCKS1-202ENST00000464938 DNAH2Q9P225 4427 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 DEPDC5O75140 1603 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 MTORP42345 2549 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 C3orf79P0CE67 100 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 PRO3102Q9H379 93 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 RABAC1Q9UI14 185 aa-0.85□□□□□ -2.55
NUCKS1-202ENST00000464938 H0YAA0 97 aa-0.86□□□□□ -2.55
NUCKS1-202ENST00000464938 CCNB3Q8WWL7 1395 aa-0.86□□□□□ -2.55
NUCKS1-202ENST00000464938 NCOA2Q15596 1464 aa-0.86□□□□□ -2.55
NUCKS1-202ENST00000464938 ANKRD50Q9ULJ7 1429 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 DNAH1Q9P2D7 4330 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 LINC00158P58513 81 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 PYY3Q5JQD4 70 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 LINC00643Q86TS7 51 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 WFDC9Q8NEX5 89 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 MAP3K4Q9Y6R4 1608 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 PLIN4Q96Q06 1357 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 CCDC88BA6NC98 1476 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 MGAM2Q2M2H8 2515 aa-0.87□□□□□ -2.55
NUCKS1-202ENST00000464938 URB2Q14146 1524 aaKnown RBP-0.88□□□□□ -2.55
NUCKS1-202ENST00000464938 KIF14Q15058 1648 aa-0.88□□□□□ -2.55
NUCKS1-202ENST00000464938 K7EP34 96 aa-0.88□□□□□ -2.55
NUCKS1-202ENST00000464938 SNRPFP62306 86 aaKnown RBP-0.88□□□□□ -2.55
NUCKS1-202ENST00000464938 TTC37Q6PGP7 1564 aa-0.88□□□□□ -2.55
NUCKS1-202ENST00000464938 LRRK2Q5S007 2527 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 CEBPZOSA8MTT3 80 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 LYNX1G3V0Z9 82 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 NDUFB1O75438 58 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 PRLHP81277 87 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 FAM186AA6NE01 2351 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 HYDINQ4G0P3 5121 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 SACSQ9NZJ4 4579 aa-0.89□□□□□ -2.55
NUCKS1-202ENST00000464938 ARFGEF2Q9Y6D5 1785 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 ACACAQ13085 2346 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 NEBP20929 6669 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 KALRNO60229 2985 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 UTP20O75691 2785 aaKnown RBP-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 CEP290O15078 2479 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 PIK3C2BO00750 1634 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 RYR1P21817 5038 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 BIRC6Q9NR09 4857 aa-0.9□□□□□ -2.55
NUCKS1-202ENST00000464938 PPLO60437 1756 aa-0.91□□□□□ -2.55
NUCKS1-202ENST00000464938 PLECQ15149 4684 aaKnown RBP-0.91□□□□□ -2.55
NUCKS1-202ENST00000464938 S100A16Q96FQ6 103 aaKnown RBP-0.91□□□□□ -2.56
NUCKS1-202ENST00000464938 WDR87Q6ZQQ6 2873 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 NBEAQ8NFP9 2946 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 PVALEFA0A1B0GWK0 134 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 V9GYS6 101 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 PKD1L2Q7Z442 2459 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 CMYA5Q8N3K9 4069 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 DNAH8Q96JB1 4490 aa-0.92□□□□□ -2.56
NUCKS1-202ENST00000464938 DOPEY1Q5JWR5 2465 aa-0.93□□□□□ -2.56
NUCKS1-202ENST00000464938 ACYP1P07311 99 aa-0.93□□□□□ -2.56
NUCKS1-202ENST00000464938 S4R3F8 94 aa-0.93□□□□□ -2.56
NUCKS1-202ENST00000464938 PLCH1Q4KWH8 1693 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 ACACBO00763 2458 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 DNAH7Q8WXX0 4024 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 DEFB130BP0DP73 79 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 DEFB130AP0DP74 79 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 DNHD1Q96M86 4753 aa-0.94□□□□□ -2.56
NUCKS1-202ENST00000464938 DDX60LQ5H9U9 1706 aaKnown RBP-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 NBEAL2Q6ZNJ1 2754 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 THOC2Q8NI27 1593 aaKnown RBP-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 UMAD1C9J7I0 102 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 IFI6P09912 130 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 IAPPP10997 89 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 Q9H521 79 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 LAMA3Q16787 3333 aa-0.95□□□□□ -2.56
NUCKS1-202ENST00000464938 NDUFA4O00483 81 aa-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 IFI27P40305 119 aaPredicted RBP-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 MT1HP80294 61 aa-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 KRTAP19-5Q3LI72 72 aa-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 TDRG1Q3Y452 100 aa-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 TEX15Q9BXT5 2789 aa-0.96□□□□□ -2.56
NUCKS1-202ENST00000464938 ZC3H13Q5T200 1668 aaKnown RBP-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 CFAP43Q8NDM7 1665 aa-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 ITSN1Q15811 1721 aa-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 CCDC168Q8NDH2 2452 aa-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 DEFA5Q01523 94 aa-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 ATP5EP2Q5VTU8 51 aa-0.97□□□□□ -2.56
NUCKS1-202ENST00000464938 RANBP2P49792 3224 aaKnown RBP-0.97□□□□□ -2.57
NUCKS1-202ENST00000464938 RNF17Q9BXT8 1623 aaKnown RBP-0.97□□□□□ -2.57
NUCKS1-202ENST00000464938 TRIOO75962 3097 aa-0.98□□□□□ -2.57
NUCKS1-202ENST00000464938 NREPQ16612 68 aa-0.98□□□□□ -2.57
NUCKS1-202ENST00000464938 UACAQ9BZF9 1416 aa-0.98□□□□□ -2.57
NUCKS1-202ENST00000464938 RELNP78509 3460 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 DEFB131BA0A096LNP1 70 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 DEFB110Q30KQ9 67 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 DEFB121Q5J5C9 76 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 DEFB106AQ8N104 65 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 RICTORQ6R327 1708 aa-0.99□□□□□ -2.57
NUCKS1-202ENST00000464938 KANTRA0A1W2PQU2 76 aa-1□□□□□ -2.57
NUCKS1-202ENST00000464938 HMGA1P17096 107 aaKnown RBP-1□□□□□ -2.57
NUCKS1-202ENST00000464938 A0A0C4DFX4 3053 aa-1□□□□□ -2.57
NUCKS1-202ENST00000464938 ITSN2Q9NZM3 1697 aa-1□□□□□ -2.57
NUCKS1-202ENST00000464938 RYR3Q15413 4870 aa-1.01□□□□□ -2.57
NUCKS1-202ENST00000464938 LAMA2P24043 3122 aaKnown RBP-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms