RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
SNX17-204ENST00000453453 A0A096LNI7 61 aa10.08□□□□□ -0.8
SNX17-204ENST00000453453 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
SNX17-204ENST00000453453 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
SNX17-204ENST00000453453 NKAPP1Q8N9T2 125 aa10.07□□□□□ -0.8
SNX17-204ENST00000453453 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
SNX17-204ENST00000453453 FRAS1Q86XX4 4008 aa10.07□□□□□ -0.8
SNX17-204ENST00000453453 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
SNX17-204ENST00000453453 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX17-204ENST00000453453 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
SNX17-204ENST00000453453 KCNQ1DNQ9H478 68 aa10.04□□□□□ -0.8
SNX17-204ENST00000453453 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
SNX17-204ENST00000453453 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
SNX17-204ENST00000453453 SERTAD4-AS1Q5TG53 156 aa10.01□□□□□ -0.81
SNX17-204ENST00000453453 DHRS4-AS1Q9P1J3 65 aa10.01□□□□□ -0.81
SNX17-204ENST00000453453 FAM168BA1KXE4 195 aa10□□□□□ -0.81
SNX17-204ENST00000453453 RYR2Q92736 4967 aa9.99□□□□□ -0.81
SNX17-204ENST00000453453 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
SNX17-204ENST00000453453 KMT2CQ8NEZ4 4911 aaKnown RBP9.98□□□□□ -0.81
SNX17-204ENST00000453453 FAT2Q9NYQ8 4349 aa9.98□□□□□ -0.81
SNX17-204ENST00000453453 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
SNX17-204ENST00000453453 A0A1W2PNN7 141 aa9.96□□□□□ -0.81
SNX17-204ENST00000453453 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.81
SNX17-204ENST00000453453 Q8N377 158 aa9.96□□□□□ -0.81
SNX17-204ENST00000453453 C7orf33Q8WU49 177 aa9.96□□□□□ -0.81
SNX17-204ENST00000453453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.81
SNX17-204ENST00000453453 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
SNX17-204ENST00000453453 PANO1I0J062 215 aa9.94□□□□□ -0.82
SNX17-204ENST00000453453 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
SNX17-204ENST00000453453 Q8N9L7 120 aa9.94□□□□□ -0.82
SNX17-204ENST00000453453 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
SNX17-204ENST00000453453 Q8NBF4 154 aa9.93□□□□□ -0.82
SNX17-204ENST00000453453 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
SNX17-204ENST00000453453 KRTAP10-1P60331 282 aa9.92□□□□□ -0.82
SNX17-204ENST00000453453 Q6ZRX8 168 aa9.92□□□□□ -0.82
SNX17-204ENST00000453453 PKD1P98161 4303 aa9.91□□□□□ -0.82
SNX17-204ENST00000453453 SPRR1AP35321 89 aa9.91□□□□□ -0.82
SNX17-204ENST00000453453 ZCCHC13Q8WW36 166 aaKnown RBP9.91□□□□□ -0.82
SNX17-204ENST00000453453 HIGD2AQ9BW72 106 aa9.91□□□□□ -0.82
SNX17-204ENST00000453453 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
SNX17-204ENST00000453453 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
SNX17-204ENST00000453453 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
SNX17-204ENST00000453453 UBE2BP63146 152 aa9.9□□□□□ -0.82
SNX17-204ENST00000453453 A0A1W2PNM2 257 aa9.89□□□□□ -0.83
SNX17-204ENST00000453453 hDV103S1A0JD37 113 aa9.89□□□□□ -0.83
SNX17-204ENST00000453453 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
SNX17-204ENST00000453453 PHF5AQ7RTV0 110 aaKnown RBP9.89□□□□□ -0.83
SNX17-204ENST00000453453 ETDCA0A1B0GVM5 59 aa9.89□□□□□ -0.83
SNX17-204ENST00000453453 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
SNX17-204ENST00000453453 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
SNX17-204ENST00000453453 RYR3Q15413 4870 aa9.88□□□□□ -0.83
SNX17-204ENST00000453453 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
SNX17-204ENST00000453453 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
SNX17-204ENST00000453453 Q6ZSA8 131 aa9.87□□□□□ -0.83
SNX17-204ENST00000453453 CYP4F30PQ9H0H9 118 aa9.87□□□□□ -0.83
SNX17-204ENST00000453453 Q1T7F1 81 aa9.86□□□□□ -0.83
SNX17-204ENST00000453453 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
SNX17-204ENST00000453453 FAM30AQ9NZY2 134 aa9.85□□□□□ -0.83
SNX17-204ENST00000453453 REG3GQ6UW15 175 aa9.85□□□□□ -0.83
SNX17-204ENST00000453453 DEFB105AQ8NG35 78 aa9.84□□□□□ -0.83
SNX17-204ENST00000453453 NDUFB1O75438 58 aa9.83□□□□□ -0.84
SNX17-204ENST00000453453 CIRBP-AS1Q8TBR5 109 aa9.83□□□□□ -0.84
SNX17-204ENST00000453453 DSCR10P59022 87 aa9.82□□□□□ -0.84
SNX17-204ENST00000453453 Q9BRP9 147 aa9.82□□□□□ -0.84
SNX17-204ENST00000453453 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
SNX17-204ENST00000453453 C1orf195Q5TG92 126 aa9.8□□□□□ -0.84
SNX17-204ENST00000453453 DNAH8Q96JB1 4490 aa9.8□□□□□ -0.84
SNX17-204ENST00000453453 HCG22E2RYF7 251 aa9.79□□□□□ -0.84
SNX17-204ENST00000453453 V9GYY9 64 aa9.79□□□□□ -0.84
SNX17-204ENST00000453453 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
SNX17-204ENST00000453453 H3BPC8 53 aa9.77□□□□□ -0.85
SNX17-204ENST00000453453 C1orf64Q8NEQ6 169 aa9.77□□□□□ -0.85
SNX17-204ENST00000453453 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
SNX17-204ENST00000453453 IGLV8-61A0A075B6I0 122 aa9.75□□□□□ -0.85
SNX17-204ENST00000453453 K7EQZ3 153 aa9.75□□□□□ -0.85
SNX17-204ENST00000453453 UBE2AP49459 152 aa9.74□□□□□ -0.85
SNX17-204ENST00000453453 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
SNX17-204ENST00000453453 MP68P56378 58 aa9.72□□□□□ -0.85
SNX17-204ENST00000453453 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
SNX17-204ENST00000453453 PKHD1P08F94 4074 aa9.72□□□□□ -0.85
SNX17-204ENST00000453453 H0Y9J4 135 aa9.71□□□□□ -0.85
SNX17-204ENST00000453453 SPANXA2-OT1Q8N9U9 137 aa9.71□□□□□ -0.85
SNX17-204ENST00000453453 PRLHP81277 87 aa9.71□□□□□ -0.86
SNX17-204ENST00000453453 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
SNX17-204ENST00000453453 LRP1BQ9NZR2 4599 aa9.69□□□□□ -0.86
SNX17-204ENST00000453453 TRAV22A0A0B4J277 110 aa9.67□□□□□ -0.86
SNX17-204ENST00000453453 IGFL1Q6UW32 110 aa9.66□□□□□ -0.86
SNX17-204ENST00000453453 IGLV7-43P04211 117 aa9.65□□□□□ -0.86
SNX17-204ENST00000453453 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
SNX17-204ENST00000453453 KRTAP13-1Q8IUC0 172 aa9.64□□□□□ -0.87
SNX17-204ENST00000453453 ZNF861PO60384 105 aa9.64□□□□□ -0.87
SNX17-204ENST00000453453 CDK2AP2O75956 126 aa9.63□□□□□ -0.87
SNX17-204ENST00000453453 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
SNX17-204ENST00000453453 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SNX17-204ENST00000453453 SPRR1BP22528 89 aa9.6□□□□□ -0.87
SNX17-204ENST00000453453 LIMD2Q9BT23 127 aa9.59□□□□□ -0.87
SNX17-204ENST00000453453 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
SNX17-204ENST00000453453 APOBP04114 4563 aaKnown RBP9.58□□□□□ -0.88
SNX17-204ENST00000453453 A0A087WSZ3 146 aa9.56□□□□□ -0.88
SNX17-204ENST00000453453 H0Y9P7 68 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms