RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HDAC1-202ENST00000428704 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 hADV29S1A0JD25 119 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 SLPIP03973 132 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 C14orf177Q52M58 125 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 Q6Q795 121 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
HDAC1-202ENST00000428704 ZNF73O43830 326 aaPredicted RBP5.47□□□□□ -1.53
HDAC1-202ENST00000428704 C9orf129Q5T035 196 aaKnown RBP5.47□□□□□ -1.53
HDAC1-202ENST00000428704 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
HDAC1-202ENST00000428704 MT-ATP8P03928 68 aa5.46□□□□□ -1.54
HDAC1-202ENST00000428704 ELOF1P60002 83 aaKnown RBP5.46□□□□□ -1.54
HDAC1-202ENST00000428704 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-202ENST00000428704 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
HDAC1-202ENST00000428704 CIRBP-AS1Q8TBR5 109 aa5.46□□□□□ -1.54
HDAC1-202ENST00000428704 LPAP08519 4548 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 PANO1I0J062 215 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 COX7BP24311 80 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 GAGE2EQ4V326 116 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 IMUPQ9GZP8 106 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 GAGE2DQ9UEU5 116 aa5.45□□□□□ -1.54
HDAC1-202ENST00000428704 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
HDAC1-202ENST00000428704 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
HDAC1-202ENST00000428704 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
HDAC1-202ENST00000428704 LOC107984640A0A0U1RRK4 108 aa5.43□□□□□ -1.54
HDAC1-202ENST00000428704 CCKP06307 115 aa5.43□□□□□ -1.54
HDAC1-202ENST00000428704 PDE6GP18545 87 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 SPRR1AP35321 89 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 GAGE2BQ13066 116 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 C7orf33Q8WU49 177 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 C14orf132Q9NPU4 83 aa5.42□□□□□ -1.54
HDAC1-202ENST00000428704 IGLV1-50A0A075B6I6 118 aa5.41□□□□□ -1.54
HDAC1-202ENST00000428704 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
HDAC1-202ENST00000428704 PRYO14603 147 aa5.41□□□□□ -1.54
HDAC1-202ENST00000428704 KRTAP4-16G5E9R7 235 aaPredicted RBP5.4□□□□□ -1.54
HDAC1-202ENST00000428704 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
HDAC1-202ENST00000428704 RBM3P98179 157 aaKnown RBP5.4□□□□□ -1.54
HDAC1-202ENST00000428704 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
HDAC1-202ENST00000428704 Q6ZQY7 126 aa5.4□□□□□ -1.54
HDAC1-202ENST00000428704 PKIGQ9Y2B9 76 aa5.4□□□□□ -1.54
HDAC1-202ENST00000428704 KRTAP7-1Q8IUC3 87 aa5.39□□□□□ -1.55
HDAC1-202ENST00000428704 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
HDAC1-202ENST00000428704 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
HDAC1-202ENST00000428704 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
HDAC1-202ENST00000428704 Q6ZQT0 140 aa5.37□□□□□ -1.55
HDAC1-202ENST00000428704 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
HDAC1-202ENST00000428704 LINC00846Q9NV44 126 aa5.37□□□□□ -1.55
HDAC1-202ENST00000428704 LAMTOR3Q9UHA4 124 aa5.37□□□□□ -1.55
HDAC1-202ENST00000428704 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
HDAC1-202ENST00000428704 NDUFV3P56181 108 aaKnown RBP5.36□□□□□ -1.55
HDAC1-202ENST00000428704 Q6JHZ5 121 aa5.36□□□□□ -1.55
HDAC1-202ENST00000428704 Q6ZRX8 168 aa5.36□□□□□ -1.55
HDAC1-202ENST00000428704 DSCR8Q96T75 97 aa5.36□□□□□ -1.55
HDAC1-202ENST00000428704 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
HDAC1-202ENST00000428704 A0A096LNI7 61 aa5.35□□□□□ -1.55
HDAC1-202ENST00000428704 A0A1B0GV72 72 aa5.35□□□□□ -1.55
HDAC1-202ENST00000428704 FAM168BA1KXE4 195 aa5.35□□□□□ -1.55
HDAC1-202ENST00000428704 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
HDAC1-202ENST00000428704 IGLV5-48A0A075B6I7 105 aa5.34□□□□□ -1.55
HDAC1-202ENST00000428704 IGKV2-24A0A0C4DH68 120 aa5.34□□□□□ -1.55
HDAC1-202ENST00000428704 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
HDAC1-202ENST00000428704 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
HDAC1-202ENST00000428704 A0A1B0GW54 56 aa5.33□□□□□ -1.56
HDAC1-202ENST00000428704 LINC01547P58512 204 aaPredicted RBP5.33□□□□□ -1.56
HDAC1-202ENST00000428704 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
HDAC1-202ENST00000428704 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
HDAC1-202ENST00000428704 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
HDAC1-202ENST00000428704 RPL37AP8A6NKH3 93 aa5.32□□□□□ -1.56
HDAC1-202ENST00000428704 Q8N377 158 aa5.32□□□□□ -1.56
HDAC1-202ENST00000428704 Q9BRP9 147 aa5.32□□□□□ -1.56
HDAC1-202ENST00000428704 UBL5Q9BZL1 73 aa5.32□□□□□ -1.56
HDAC1-202ENST00000428704 H0Y9J4 135 aa5.31□□□□□ -1.56
HDAC1-202ENST00000428704 FAM19A5Q7Z5A7 132 aaPredicted RBP5.31□□□□□ -1.56
HDAC1-202ENST00000428704 HIST1H4AP62805 103 aaKnown RBP5.3□□□□□ -1.56
HDAC1-202ENST00000428704 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
HDAC1-202ENST00000428704 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
HDAC1-202ENST00000428704 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
HDAC1-202ENST00000428704 CXCL6P80162 114 aa5.27□□□□□ -1.57
HDAC1-202ENST00000428704 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
HDAC1-202ENST00000428704 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 ERC2-IT1O76042 136 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 SPRR1BP22528 89 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 UBE2BP63146 152 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 Q6ZVQ6 151 aa5.26□□□□□ -1.57
HDAC1-202ENST00000428704 IGLV8-61A0A075B6I0 122 aa5.25□□□□□ -1.57
HDAC1-202ENST00000428704 BCE1O60756 84 aa5.25□□□□□ -1.57
HDAC1-202ENST00000428704 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
HDAC1-202ENST00000428704 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
HDAC1-202ENST00000428704 ATOX1O00244 68 aa5.24□□□□□ -1.57
HDAC1-202ENST00000428704 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
HDAC1-202ENST00000428704 FAM19A1Q7Z5A9 133 aa5.24□□□□□ -1.57
HDAC1-202ENST00000428704 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
HDAC1-202ENST00000428704 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
HDAC1-202ENST00000428704 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms