RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PKIGQ9Y2B9 76 aa5.5□□□□□ -1.53
SNCA-206ENST00000420646 DNAH11Q96DT5 4516 aa5.5□□□□□ -1.53
SNCA-206ENST00000420646 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
SNCA-206ENST00000420646 A0A087WTM6 91 aa5.49□□□□□ -1.53
SNCA-206ENST00000420646 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 GHRHP01286 108 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 SMIM29Q86T20 159 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 EPM2AB3EWF7 344 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 IGLV5-48A0A075B6I7 105 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 H3BQ85 93 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 PDE6GP18545 87 aa5.48□□□□□ -1.53
SNCA-206ENST00000420646 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.53
SNCA-206ENST00000420646 TNP2Q05952 138 aa5.46□□□□□ -1.54
SNCA-206ENST00000420646 Q6ZR54 194 aa5.46□□□□□ -1.54
SNCA-206ENST00000420646 BPY2O14599 106 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 DEFB116Q30KQ4 102 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 RTL8CO15255 209 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 NREPQ16612 68 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 LINC00476Q8WZB0 136 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
SNCA-206ENST00000420646 UBE2AP49459 152 aa5.44□□□□□ -1.54
SNCA-206ENST00000420646 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
SNCA-206ENST00000420646 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
SNCA-206ENST00000420646 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
SNCA-206ENST00000420646 IGFL1Q6UW32 110 aa5.43□□□□□ -1.54
SNCA-206ENST00000420646 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
SNCA-206ENST00000420646 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
SNCA-206ENST00000420646 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
SNCA-206ENST00000420646 C1orf134Q5TEV5 83 aa5.42□□□□□ -1.54
SNCA-206ENST00000420646 ANAPC11Q9NYG5 84 aa5.42□□□□□ -1.54
SNCA-206ENST00000420646 LRP1BQ9NZR2 4599 aa5.42□□□□□ -1.54
SNCA-206ENST00000420646 FAM236DA0A1B0GTK5 79 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 FAM236CP0DP71 79 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 Q8NBF4 154 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 F8WEM9 126 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 CXCL6P80162 114 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 LINC00474Q9P2X8 69 aa5.41□□□□□ -1.54
SNCA-206ENST00000420646 FAT2Q9NYQ8 4349 aa5.4□□□□□ -1.54
SNCA-206ENST00000420646 PKHD1P08F94 4074 aa5.4□□□□□ -1.54
SNCA-206ENST00000420646 A0A087WSZ3 146 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 PKD1P98161 4303 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 BCE1O60756 84 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
SNCA-206ENST00000420646 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
SNCA-206ENST00000420646 FP248Q71RG6 208 aaPredicted RBP5.38□□□□□ -1.55
SNCA-206ENST00000420646 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 SPRR4Q96PI1 79 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 H7BZZ5 65 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 ALMS1Q8TCU4 4167 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 SEC61GP60059 68 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 RPL37AP61513 92 aaKnown RBP5.37□□□□□ -1.55
SNCA-206ENST00000420646 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
SNCA-206ENST00000420646 K7EQZ3 153 aa5.36□□□□□ -1.55
SNCA-206ENST00000420646 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
SNCA-206ENST00000420646 DSCR10P59022 87 aa5.36□□□□□ -1.55
SNCA-206ENST00000420646 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
SNCA-206ENST00000420646 H0Y9J4 135 aa5.35□□□□□ -1.55
SNCA-206ENST00000420646 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
SNCA-206ENST00000420646 LCE2DQ5TA82 110 aaPredicted RBP5.34□□□□□ -1.56
SNCA-206ENST00000420646 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
SNCA-206ENST00000420646 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
SNCA-206ENST00000420646 CIRBP-AS1Q8TBR5 109 aa5.33□□□□□ -1.56
SNCA-206ENST00000420646 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
SNCA-206ENST00000420646 V9GYY9 64 aa5.32□□□□□ -1.56
SNCA-206ENST00000420646 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
SNCA-206ENST00000420646 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
SNCA-206ENST00000420646 SPRR1BP22528 89 aa5.31□□□□□ -1.56
SNCA-206ENST00000420646 MPLKIPQ8TAP9 179 aa5.31□□□□□ -1.56
SNCA-206ENST00000420646 RYR2Q92736 4967 aa5.31□□□□□ -1.56
SNCA-206ENST00000420646 KRTAP10-1P60331 282 aa5.3□□□□□ -1.56
SNCA-206ENST00000420646 MOBPQ13875 183 aa5.3□□□□□ -1.56
SNCA-206ENST00000420646 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
SNCA-206ENST00000420646 ZNF861PO60384 105 aa5.29□□□□□ -1.56
SNCA-206ENST00000420646 WFDC13Q8IUB5 93 aa5.29□□□□□ -1.56
SNCA-206ENST00000420646 NDUFC1O43677 76 aa5.29□□□□□ -1.56
SNCA-206ENST00000420646 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
SNCA-206ENST00000420646 OCR1Q9BZK8 76 aa5.28□□□□□ -1.56
SNCA-206ENST00000420646 A0A1B0GW54 56 aa5.27□□□□□ -1.57
SNCA-206ENST00000420646 LCE6AA0A183 80 aa5.26□□□□□ -1.57
SNCA-206ENST00000420646 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
SNCA-206ENST00000420646 FAT1Q14517 4588 aa5.26□□□□□ -1.57
SNCA-206ENST00000420646 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
SNCA-206ENST00000420646 RYR1P21817 5038 aa5.25□□□□□ -1.57
SNCA-206ENST00000420646 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
SNCA-206ENST00000420646 HCG22E2RYF7 251 aa5.24□□□□□ -1.57
SNCA-206ENST00000420646 LINC00483Q53H64 154 aa5.24□□□□□ -1.57
SNCA-206ENST00000420646 TMEM254Q8TBM7 123 aa5.24□□□□□ -1.57
SNCA-206ENST00000420646 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
SNCA-206ENST00000420646 A0A087X002 238 aa5.21□□□□□ -1.57
SNCA-206ENST00000420646 Q96NJ1 140 aa5.21□□□□□ -1.57
SNCA-206ENST00000420646 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.58
SNCA-206ENST00000420646 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
SNCA-206ENST00000420646 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms