RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 H3BQ85 93 aa2.36□□□□□ -2.03
HMGB3P20-201ENST00000417997 BAALC-AS2P0C853 105 aa2.36□□□□□ -2.03
HMGB3P20-201ENST00000417997 OCIAD2Q56VL3 154 aa2.36□□□□□ -2.03
HMGB3P20-201ENST00000417997 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
HMGB3P20-201ENST00000417997 KCNQ1DNQ9H478 68 aa2.36□□□□□ -2.03
HMGB3P20-201ENST00000417997 IGLV1-50A0A075B6I6 118 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 LCE6AA0A183 80 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 TMEM256-PLSCR3K7ERE1 68 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 INAFM2P0DMQ5 153 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 FUSP35637 526 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 Q6ZQY7 126 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 Q6ZRX8 168 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 FAM19A1Q7Z5A9 133 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 SPACA4Q8TDM5 124 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 LAMTOR3Q9UHA4 124 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
HMGB3P20-201ENST00000417997 A0A1W2PNN7 141 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 JMJD7-PLA2G4BH0Y9G9 81 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 SPRR1AP35321 89 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 UBE2AP49459 152 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 LINC01600Q96MT4 127 aa2.34□□□□□ -2.03
HMGB3P20-201ENST00000417997 DNAH9Q9NYC9 4486 aa2.34□□□□□ -2.04
HMGB3P20-201ENST00000417997 TEX49A0A1B0GTD5 131 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 F8WEM9 126 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 PRLHP81277 87 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 HIGD2AQ9BW72 106 aa2.33□□□□□ -2.04
HMGB3P20-201ENST00000417997 KRTAP4-16G5E9R7 235 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 PANO1I0J062 215 aa2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 BCE1O60756 84 aa2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 DSCR8Q96T75 97 aa2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 C14orf132Q9NPU4 83 aa2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 MEGF8Q7Z7M0 2845 aa2.32□□□□□ -2.04
HMGB3P20-201ENST00000417997 FAM240AA0A1B0GVK7 77 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 ACYP1P07311 99 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 C1orf137Q5JT78 98 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 SMCR5Q8TEV8 140 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 Q9BRP9 147 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 PLAC8Q9NZF1 115 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 STAB2Q8WWQ8 2551 aa2.31□□□□□ -2.04
HMGB3P20-201ENST00000417997 PDE6GP18545 87 aa2.3□□□□□ -2.04
HMGB3P20-201ENST00000417997 ST20-AS1Q8NBB2 130 aa2.3□□□□□ -2.04
HMGB3P20-201ENST00000417997 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
HMGB3P20-201ENST00000417997 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P20-201ENST00000417997 IGLV5-48A0A075B6I7 105 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 LOC110117498A0A087WWA1 95 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 ERC2-IT1O76042 136 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 CCKP06307 115 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 KRTAP10-1P60331 282 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 SCXQ7RTU7 201 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 C3orf22Q8N5N4 141 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 PSORS1C2Q9UIG4 136 aa2.29□□□□□ -2.04
HMGB3P20-201ENST00000417997 FBN3Q75N90 2809 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 TRBV7-4A0A0J9YYF1 115 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 HAMPP81172 84 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 C9orf153Q5TBE3 101 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 Q6ZQT0 140 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 Q6ZSA8 131 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 UBL5Q9BZL1 73 aa2.28□□□□□ -2.04
HMGB3P20-201ENST00000417997 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 ZNF861PO60384 105 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 LINC00643Q86TS7 51 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 SIGMAR1Q99720 223 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
HMGB3P20-201ENST00000417997 DYNC2H1Q8NCM8 4307 aaKnown RBP2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 ALMS1Q8TCU4 4167 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 SPRR1BP22528 89 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 RPL37AP61513 92 aaKnown RBP2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 Q6JHZ5 121 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 SPRR4Q96PI1 79 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 LINC00846Q9NV44 126 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 STARD9Q9P2P6 4700 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
HMGB3P20-201ENST00000417997 IGKV3D-7A0A0C4DH55 119 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 MT-ATP8P03928 68 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 CXCL6P80162 114 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 MOBPQ13875 183 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 TENM2Q9NT68 2774 aa2.25□□□□□ -2.05
HMGB3P20-201ENST00000417997 IGLV8-61A0A075B6I0 122 aa2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 TRBV7-7A0A0K0K1E9 115 aa2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 A0A1B0GW54 56 aa2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 A0A1W2PNM2 257 aa2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 HIST1H4AP62805 103 aaKnown RBP2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 NREPQ16612 68 aa2.24□□□□□ -2.05
HMGB3P20-201ENST00000417997 LINC00483Q53H64 154 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms