RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 A0A0J9YWU9 116 aa6.15□□□□□ -1.43
SNHG3-201ENST00000413987 Q1T7F1 81 aa6.15□□□□□ -1.43
SNHG3-201ENST00000413987 A8MWP4 228 aa6.14□□□□□ -1.43
SNHG3-201ENST00000413987 A0A096LPF7 62 aa6.13□□□□□ -1.43
SNHG3-201ENST00000413987 A0A1B0GUV1 79 aa6.13□□□□□ -1.43
SNHG3-201ENST00000413987 BPY2O14599 106 aa6.13□□□□□ -1.43
SNHG3-201ENST00000413987 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
SNHG3-201ENST00000413987 ESRGQ1W209 222 aa6.13□□□□□ -1.43
SNHG3-201ENST00000413987 M0R2N4 97 aa6.12□□□□□ -1.43
SNHG3-201ENST00000413987 LINC00612Q8N6U2 182 aa6.12□□□□□ -1.43
SNHG3-201ENST00000413987 Q6ZTC4 211 aa6.11□□□□□ -1.43
SNHG3-201ENST00000413987 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
SNHG3-201ENST00000413987 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
SNHG3-201ENST00000413987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.11□□□□□ -1.43
SNHG3-201ENST00000413987 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
SNHG3-201ENST00000413987 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
SNHG3-201ENST00000413987 Q6ZQY7 126 aa6.1□□□□□ -1.43
SNHG3-201ENST00000413987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.1□□□□□ -1.43
SNHG3-201ENST00000413987 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
SNHG3-201ENST00000413987 IGLV6-57P01721 117 aa6.09□□□□□ -1.43
SNHG3-201ENST00000413987 COX7BP24311 80 aa6.07□□□□□ -1.44
SNHG3-201ENST00000413987 STARD9Q9P2P6 4700 aa6.07□□□□□ -1.44
SNHG3-201ENST00000413987 FAM229BQ4G0N7 80 aa6.07□□□□□ -1.44
SNHG3-201ENST00000413987 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
SNHG3-201ENST00000413987 PRO0255Q9UI72 69 aa6.06□□□□□ -1.44
SNHG3-201ENST00000413987 TLX1NBP0CAT3 122 aa6.05□□□□□ -1.44
SNHG3-201ENST00000413987 PLECQ15149 4684 aaKnown RBP6.05□□□□□ -1.44
SNHG3-201ENST00000413987 Q8NDZ9 215 aa6.05□□□□□ -1.44
SNHG3-201ENST00000413987 IGKV4-1P06312 121 aa6.05□□□□□ -1.44
SNHG3-201ENST00000413987 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
SNHG3-201ENST00000413987 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
SNHG3-201ENST00000413987 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
SNHG3-201ENST00000413987 DEFB131BA0A096LNP1 70 aa6.03□□□□□ -1.44
SNHG3-201ENST00000413987 CLPSL2Q6UWE3 100 aa6.03□□□□□ -1.44
SNHG3-201ENST00000413987 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
SNHG3-201ENST00000413987 ELOF1P60002 83 aaKnown RBP6.02□□□□□ -1.45
SNHG3-201ENST00000413987 ROMO1P60602 79 aa6.02□□□□□ -1.45
SNHG3-201ENST00000413987 SPAG11BQ08648 103 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 HIGD2AQ9BW72 106 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 GVQW2A0A096LPI5 108 aaPredicted RBP6.01□□□□□ -1.45
SNHG3-201ENST00000413987 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 C1orf134Q5TEV5 83 aa6.01□□□□□ -1.45
SNHG3-201ENST00000413987 DYNC2H1Q8NCM8 4307 aaKnown RBP6□□□□□ -1.45
SNHG3-201ENST00000413987 DNAH1Q9P2D7 4330 aa6□□□□□ -1.45
SNHG3-201ENST00000413987 UNQ6190/PRO20217Q6UXQ8 127 aa6□□□□□ -1.45
SNHG3-201ENST00000413987 LCE6AA0A183 80 aa5.99□□□□□ -1.45
SNHG3-201ENST00000413987 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
SNHG3-201ENST00000413987 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
SNHG3-201ENST00000413987 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
SNHG3-201ENST00000413987 Q8N1X5 172 aa5.98□□□□□ -1.45
SNHG3-201ENST00000413987 Q8N9L7 120 aa5.98□□□□□ -1.45
SNHG3-201ENST00000413987 IGLV10-54A0A075B6I4 117 aa5.98□□□□□ -1.45
SNHG3-201ENST00000413987 DNAH10Q8IVF4 4471 aa5.97□□□□□ -1.45
SNHG3-201ENST00000413987 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
SNHG3-201ENST00000413987 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
SNHG3-201ENST00000413987 HCG22E2RYF7 251 aa5.95□□□□□ -1.46
SNHG3-201ENST00000413987 LCE2BO14633 110 aa5.95□□□□□ -1.46
SNHG3-201ENST00000413987 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
SNHG3-201ENST00000413987 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
SNHG3-201ENST00000413987 ZCCHC13Q8WW36 166 aaKnown RBP5.94□□□□□ -1.46
SNHG3-201ENST00000413987 ETDCA0A1B0GVM5 59 aa5.94□□□□□ -1.46
SNHG3-201ENST00000413987 NDUFB1O75438 58 aa5.93□□□□□ -1.46
SNHG3-201ENST00000413987 LELP1Q5T871 98 aa5.93□□□□□ -1.46
SNHG3-201ENST00000413987 C6orf48Q9UBA6 75 aa5.93□□□□□ -1.46
SNHG3-201ENST00000413987 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
SNHG3-201ENST00000413987 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
SNHG3-201ENST00000413987 H3BNG1 76 aa5.92□□□□□ -1.46
SNHG3-201ENST00000413987 KLK12Q9UKR0 248 aa5.92□□□□□ -1.46
SNHG3-201ENST00000413987 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
SNHG3-201ENST00000413987 A8MUU9 505 aa5.91□□□□□ -1.46
SNHG3-201ENST00000413987 PRR34Q9NV39 138 aa5.91□□□□□ -1.46
SNHG3-201ENST00000413987 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.9□□□□□ -1.46
SNHG3-201ENST00000413987 Q8N377 158 aa5.9□□□□□ -1.46
SNHG3-201ENST00000413987 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
SNHG3-201ENST00000413987 LRCOL1A6NCL2 159 aa5.9□□□□□ -1.47
SNHG3-201ENST00000413987 PSCAO43653 123 aa5.89□□□□□ -1.47
SNHG3-201ENST00000413987 DNAH10OSP0CZ25 163 aa5.89□□□□□ -1.47
SNHG3-201ENST00000413987 APLNQ9ULZ1 77 aa5.89□□□□□ -1.47
SNHG3-201ENST00000413987 VPS13DQ5THJ4 4388 aa5.88□□□□□ -1.47
SNHG3-201ENST00000413987 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
SNHG3-201ENST00000413987 DNAH2Q9P225 4427 aa5.86□□□□□ -1.47
SNHG3-201ENST00000413987 NUPR2A6NF83 97 aa5.86□□□□□ -1.47
SNHG3-201ENST00000413987 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
SNHG3-201ENST00000413987 HYDINQ4G0P3 5121 aa5.85□□□□□ -1.47
SNHG3-201ENST00000413987 H3BPC8 53 aa5.85□□□□□ -1.47
SNHG3-201ENST00000413987 UBE2DNLQ8IWF7 75 aa5.85□□□□□ -1.47
SNHG3-201ENST00000413987 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
SNHG3-201ENST00000413987 A0A1W2PNM2 257 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 C1orf137Q5JT78 98 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 DEFB105AQ8NG35 78 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 SPRR4Q96PI1 79 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 DSCR10P59022 87 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
SNHG3-201ENST00000413987 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
SNHG3-201ENST00000413987 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SNHG3-201ENST00000413987 Q5VV11 94 aa5.83□□□□□ -1.48
SNHG3-201ENST00000413987 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
SNHG3-201ENST00000413987 K7EQZ3 153 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms