RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 RBM3P98179 157 aaKnown RBP3.49□□□□□ -1.85
EPHA4-202ENST00000409854 LINC00528Q8N1L1 170 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 C8orf87E5RJ46 101 aa3.48□□□□□ -1.85
EPHA4-202ENST00000409854 PANO1I0J062 215 aa3.48□□□□□ -1.85
EPHA4-202ENST00000409854 COX7BP24311 80 aa3.48□□□□□ -1.85
EPHA4-202ENST00000409854 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
EPHA4-202ENST00000409854 DNAL4O96015 105 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.47□□□□□ -1.85
EPHA4-202ENST00000409854 IGLV5-52A0A0A0MRZ9 124 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 RPL37AP8A6NKH3 93 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 J3QL48 77 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 GHRHP01286 108 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 BAALC-AS2P0C853 105 aa3.47□□□□□ -1.85
EPHA4-202ENST00000409854 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.85
EPHA4-202ENST00000409854 Q6ZRX8 168 aa3.46□□□□□ -1.85
EPHA4-202ENST00000409854 LCA10Q71F78 164 aa3.46□□□□□ -1.85
EPHA4-202ENST00000409854 SACSQ9NZJ4 4579 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 PKD1P98161 4303 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 ORMDL1Q9P0S3 153 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 FUSP35637 526 aaKnown RBP eCLIP3.46□□□□□ -1.86
EPHA4-202ENST00000409854 CXCL6P80162 114 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 REG3GQ6UW15 175 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
EPHA4-202ENST00000409854 FAT2Q9NYQ8 4349 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 KRTAP10-2P60368 255 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.45□□□□□ -1.86
EPHA4-202ENST00000409854 OBSCN-AS1Q96MR7 158 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 H3BQ85 93 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 KRTAP11-1Q8IUC1 163 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 ATP11AUNQ6ZP68 121 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 Q9BRP9 147 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
EPHA4-202ENST00000409854 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
EPHA4-202ENST00000409854 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
EPHA4-202ENST00000409854 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
EPHA4-202ENST00000409854 Q6ZQY7 126 aa3.44□□□□□ -1.86
EPHA4-202ENST00000409854 H0Y9J4 135 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 Q6ZSA8 131 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 DNAH8Q96JB1 4490 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 C7orf65Q6ZTY9 151 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 RYR2Q92736 4967 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 A0A087X002 238 aa3.43□□□□□ -1.86
EPHA4-202ENST00000409854 F8WEM9 126 aa3.42□□□□□ -1.86
EPHA4-202ENST00000409854 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
EPHA4-202ENST00000409854 KRTAP13-1Q8IUC0 172 aa3.42□□□□□ -1.86
EPHA4-202ENST00000409854 C14orf132Q9NPU4 83 aa3.42□□□□□ -1.86
EPHA4-202ENST00000409854 IGLV5-48A0A075B6I7 105 aa3.42□□□□□ -1.86
EPHA4-202ENST00000409854 UBE2AP49459 152 aa3.42□□□□□ -1.86
EPHA4-202ENST00000409854 A0A1B0GVY2 172 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 JMJD7-PLA2G4BH0Y9G9 81 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 ASB16-AS1Q495Z4 193 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 KRTAP10-1P60331 282 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 FAM30AQ9NZY2 134 aa3.41□□□□□ -1.86
EPHA4-202ENST00000409854 PRLHP81277 87 aa3.4□□□□□ -1.86
EPHA4-202ENST00000409854 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.86
EPHA4-202ENST00000409854 A8MUN3 132 aa3.4□□□□□ -1.86
EPHA4-202ENST00000409854 Q8N377 158 aa3.4□□□□□ -1.86
EPHA4-202ENST00000409854 CIRBP-AS1Q8TBR5 109 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 LOC110117498A0A087WWA1 95 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 ST20-AS1Q8NBB2 130 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 SCXQ7RTU7 201 aa3.39□□□□□ -1.87
EPHA4-202ENST00000409854 TRBV7-4A0A0J9YYF1 115 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 SPRR1BP22528 89 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 KMT2CQ8NEZ4 4911 aaKnown RBP3.38□□□□□ -1.87
EPHA4-202ENST00000409854 DEFB105AQ8NG35 78 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 A6NN06 94 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 Q6ZQT0 140 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 SMIM29Q86T20 159 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 HIGD2AQ9BW72 106 aa3.38□□□□□ -1.87
EPHA4-202ENST00000409854 hDV103S1A0JD37 113 aa3.37□□□□□ -1.87
EPHA4-202ENST00000409854 PDE6GP18545 87 aa3.37□□□□□ -1.87
EPHA4-202ENST00000409854 UBL5Q9BZL1 73 aa3.37□□□□□ -1.87
EPHA4-202ENST00000409854 LINC00846Q9NV44 126 aa3.37□□□□□ -1.87
EPHA4-202ENST00000409854 A0A087WVE0 104 aa3.36□□□□□ -1.87
EPHA4-202ENST00000409854 MP68P56378 58 aa3.36□□□□□ -1.87
EPHA4-202ENST00000409854 C1orf137Q5JT78 98 aa3.36□□□□□ -1.87
EPHA4-202ENST00000409854 ZNF861PO60384 105 aa3.36□□□□□ -1.87
EPHA4-202ENST00000409854 LIMD2Q9BT23 127 aa3.36□□□□□ -1.87
EPHA4-202ENST00000409854 IGLV8-61A0A075B6I0 122 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 IGLV7-43P04211 117 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 HAMPP81172 84 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 SPRR4Q96PI1 79 aa3.35□□□□□ -1.87
EPHA4-202ENST00000409854 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
EPHA4-202ENST00000409854 PKHD1P08F94 4074 aa3.34□□□□□ -1.87
EPHA4-202ENST00000409854 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
EPHA4-202ENST00000409854 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.87
EPHA4-202ENST00000409854 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
EPHA4-202ENST00000409854 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
EPHA4-202ENST00000409854 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
EPHA4-202ENST00000409854 LCE2BO14633 110 aa3.33□□□□□ -1.88
EPHA4-202ENST00000409854 A0A1B0GW54 56 aa3.32□□□□□ -1.88
EPHA4-202ENST00000409854 RYR3Q15413 4870 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms