RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C9orf116Q5BN46 136 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 UNQ6190/PRO20217Q6UXQ8 127 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 TMEM126AQ9H061 195 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 C22orf24Q9Y442 160 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 ACANP16112 2415 aa2.34□□□□□ -2.03
HMGB3P18-201ENST00000406327 TLN2Q9Y4G6 2542 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 ZNF469Q96JG9 3925 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 AKAP9Q99996 3911 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 DEFB131BA0A096LNP1 70 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 ACYP1P07311 99 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 KRTAP26-1Q6PEX3 210 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 SMCR5Q8TEV8 140 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 LINC00526Q96FQ7 95 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 OBSCN-AS1Q96MR7 158 aa2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 FN1P02751 2386 aaKnown RBP2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 ANK3Q12955 4377 aaKnown RBP2.33□□□□□ -2.04
HMGB3P18-201ENST00000406327 HECTD1Q9ULT8 2610 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 CUBNO60494 3623 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 A0A1B0GX51 115 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 SNCGO76070 127 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 DNAL4O96015 105 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 LINC01556Q5JQF7 62 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 Q8N814 137 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 Q8NDZ9 215 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 C6orf48Q9UBA6 75 aa2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
HMGB3P18-201ENST00000406327 MTORP42345 2549 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 HIVEP1P15822 2718 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 TRAV10A0A0B4J240 114 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 NCR3O14931 201 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 FUSP35637 526 aaKnown RBP eCLIP2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 Q6Q795 121 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 LINC00575Q6W349 94 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
HMGB3P18-201ENST00000406327 A0A1B0GV72 72 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 hADV29S1A0JD25 119 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 K7EIL1 84 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 LINC00643Q86TS7 51 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 C14orf132Q9NPU4 83 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 VWFP04275 2813 aa2.3□□□□□ -2.04
HMGB3P18-201ENST00000406327 C2CD3Q4AC94 2353 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 TRBV7-7A0A0K0K1E9 115 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 TRBV10-3A0A0K0K1G6 114 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 M0R378 163 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 CCKP06307 115 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 IMUPQ9GZP8 106 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 FBN1P35555 2871 aaKnown RBP2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 TENM1Q9UKZ4 2725 aa2.29□□□□□ -2.04
HMGB3P18-201ENST00000406327 NBEAL2Q6ZNJ1 2754 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 NSD1Q96L73 2696 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 SETD2Q9BYW2 2564 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 A8MUN3 132 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 COX7BP24311 80 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 DIRC1Q969H9 104 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 JMJD1CQ15652 2540 aa2.28□□□□□ -2.04
HMGB3P18-201ENST00000406327 NBPF19A0A087WUL8 3843 aa2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 ELOF1P60002 83 aaKnown RBP2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 Q6ZQY7 126 aa2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 Q9BRP9 147 aa2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 LINC00846Q9NV44 126 aa2.27□□□□□ -2.05
HMGB3P18-201ENST00000406327 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 PDE6GP18545 87 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 HIST1H4AP62805 103 aaKnown RBP2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 Q6JHZ5 121 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 Q6ZQT0 140 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 KCNQ1DNQ9H478 68 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 LAMTOR3Q9UHA4 124 aa2.26□□□□□ -2.05
HMGB3P18-201ENST00000406327 TEP1Q99973 2627 aaKnown RBP2.25□□□□□ -2.05
HMGB3P18-201ENST00000406327 DSCR8Q96T75 97 aa2.25□□□□□ -2.05
HMGB3P18-201ENST00000406327 APLNQ9ULZ1 77 aa2.25□□□□□ -2.05
HMGB3P18-201ENST00000406327 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 LOC107984640A0A0U1RRK4 108 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 FAM236AA0A1B0GUQ0 79 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 FAM236BA0A1B0GV22 79 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 CCDC179H3BU77 68 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 UBL5Q9BZL1 73 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 ATRQ13535 2644 aa2.24□□□□□ -2.05
HMGB3P18-201ENST00000406327 TRBV7-4A0A0J9YYF1 115 aa2.23□□□□□ -2.05
HMGB3P18-201ENST00000406327 C3orf84H3BNL1 204 aa2.23□□□□□ -2.05
HMGB3P18-201ENST00000406327 M0R2N4 97 aa2.23□□□□□ -2.05
HMGB3P18-201ENST00000406327 SPRR1AP35321 89 aa2.23□□□□□ -2.05
HMGB3P18-201ENST00000406327 CNBPP62633 177 aaKnown RBP2.23□□□□□ -2.05
HMGB3P18-201ENST00000406327 F8P00451 2351 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 ETDCA0A1B0GVM5 59 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 ATOX1O00244 68 aa2.22□□□□□ -2.05
HMGB3P18-201ENST00000406327 Q6ZRX8 168 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms