RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 C4orf26Q17RF5 130 aa2.4□□□□□ -2.03
RTN4-209ENST00000405240 PLECQ15149 4684 aaKnown RBP2.4□□□□□ -2.03
RTN4-209ENST00000405240 K7EQZ3 153 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 HECTD1Q9ULT8 2610 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 DNAH17Q9UFH2 4485 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 C14orf177Q52M58 125 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 C9orf163Q8N9P6 203 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
RTN4-209ENST00000405240 UBE2BP63146 152 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 LINC00472Q9H8W2 130 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 HCG22E2RYF7 251 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 HIGD2AQ9BW72 106 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 PRB2P02812 416 aaPredicted RBP2.38□□□□□ -2.03
RTN4-209ENST00000405240 PKIGQ9Y2B9 76 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
RTN4-209ENST00000405240 PSCAO43653 123 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 CYP4F30PQ9H0H9 118 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 PRLHP81277 87 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 B9D2Q9BPU9 175 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.37□□□□□ -2.03
RTN4-209ENST00000405240 FAM229BQ4G0N7 80 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 PHF5AQ7RTV0 110 aaKnown RBP2.37□□□□□ -2.03
RTN4-209ENST00000405240 FAM30AQ9NZY2 134 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 STARD9Q9P2P6 4700 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 Q96NJ1 140 aa2.37□□□□□ -2.03
RTN4-209ENST00000405240 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 A0A0G2JQZ4 141 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 RPL37AP61513 92 aaKnown RBP2.36□□□□□ -2.03
RTN4-209ENST00000405240 HRCT1Q6UXD1 115 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 SPACA4Q8TDM5 124 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 CHTF8P0CG12 524 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 H3BPC8 53 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 PANO1I0J062 215 aa2.36□□□□□ -2.03
RTN4-209ENST00000405240 A8MWP4 228 aa2.35□□□□□ -2.03
RTN4-209ENST00000405240 UBE2AP49459 152 aa2.35□□□□□ -2.03
RTN4-209ENST00000405240 FLNBO75369 2602 aaKnown RBP2.35□□□□□ -2.03
RTN4-209ENST00000405240 A0A087WSZ3 146 aa2.35□□□□□ -2.03
RTN4-209ENST00000405240 Q1T7F1 81 aa2.35□□□□□ -2.03
RTN4-209ENST00000405240 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
RTN4-209ENST00000405240 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
RTN4-209ENST00000405240 TENM2Q9NT68 2774 aa2.34□□□□□ -2.03
RTN4-209ENST00000405240 TRAV22A0A0B4J277 110 aa2.34□□□□□ -2.03
RTN4-209ENST00000405240 NUPR2A6NF83 97 aa2.34□□□□□ -2.03
RTN4-209ENST00000405240 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.04
RTN4-209ENST00000405240 F8P00451 2351 aa2.34□□□□□ -2.04
RTN4-209ENST00000405240 FBN3Q75N90 2809 aa2.34□□□□□ -2.04
RTN4-209ENST00000405240 STAB1Q9NY15 2570 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 Q6ZR54 194 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 NDUFB1O75438 58 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 C1orf64Q8NEQ6 169 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.33□□□□□ -2.04
RTN4-209ENST00000405240 UBE2DNLQ8IWF7 75 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
RTN4-209ENST00000405240 A0A087WTM6 91 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 CASC2Q6XLA1 102 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 WWC2-AS2Q96NR7 200 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 PKD1P98161 4303 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 DNAH11Q96DT5 4516 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 IGLV5-52A0A0A0MRZ9 124 aa2.32□□□□□ -2.04
RTN4-209ENST00000405240 MOBPQ13875 183 aa2.31□□□□□ -2.04
RTN4-209ENST00000405240 WFDC13Q8IUB5 93 aa2.31□□□□□ -2.04
RTN4-209ENST00000405240 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
RTN4-209ENST00000405240 NBEAL1Q6ZS30 2694 aa2.31□□□□□ -2.04
RTN4-209ENST00000405240 LCE2BO14633 110 aa2.31□□□□□ -2.04
RTN4-209ENST00000405240 H0Y9P7 68 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 MP68P56378 58 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 TP53AIP1Q9HCN2 124 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
RTN4-209ENST00000405240 IGLV7-46A0A075B6I9 117 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 PSORS1C2Q9UIG4 136 aa2.3□□□□□ -2.04
RTN4-209ENST00000405240 ZNF861PO60384 105 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 RTL8CO15255 209 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 A0A1B0GVX0 72 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 CD164Q04900 197 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 LINC00208Q96KT6 92 aa2.29□□□□□ -2.04
RTN4-209ENST00000405240 SRRM2Q9UQ35 2752 aaKnown RBP2.29□□□□□ -2.04
RTN4-209ENST00000405240 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.04
RTN4-209ENST00000405240 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
RTN4-209ENST00000405240 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
RTN4-209ENST00000405240 MPLKIPQ8TAP9 179 aa2.27□□□□□ -2.05
RTN4-209ENST00000405240 LCE2AQ5TA79 106 aaPredicted RBP2.27□□□□□ -2.05
RTN4-209ENST00000405240 Q8N9P0 234 aaPredicted RBP2.27□□□□□ -2.05
RTN4-209ENST00000405240 V9GYY9 64 aa2.27□□□□□ -2.05
RTN4-209ENST00000405240 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
RTN4-209ENST00000405240 IGLV9-49A0A0B4J1Y8 123 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms