RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 SPRR1BP22528 89 aa14.42□□□□□ -0.1
RABGGTA-202ENST00000399409 STAB2Q8WWQ8 2551 aa14.4□□□□□ -0.1
RABGGTA-202ENST00000399409 KRTAP11-1Q8IUC1 163 aa14.39□□□□□ -0.11
RABGGTA-202ENST00000399409 DYNC2H1Q8NCM8 4307 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-202ENST00000399409 K7EQZ3 153 aa14.39□□□□□ -0.11
RABGGTA-202ENST00000399409 DNAH9Q9NYC9 4486 aa14.37□□□□□ -0.11
RABGGTA-202ENST00000399409 MDFIQ99750 246 aa14.36□□□□□ -0.11
RABGGTA-202ENST00000399409 A0A0G2JQZ4 141 aa14.36□□□□□ -0.11
RABGGTA-202ENST00000399409 Q6ZRN7 208 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-202ENST00000399409 FAM30AQ9NZY2 134 aa14.35□□□□□ -0.11
RABGGTA-202ENST00000399409 LCE6AA0A183 80 aa14.35□□□□□ -0.11
RABGGTA-202ENST00000399409 A0A087WSZ3 146 aa14.33□□□□□ -0.12
RABGGTA-202ENST00000399409 COL7A1Q02388 2944 aa14.33□□□□□ -0.12
RABGGTA-202ENST00000399409 HCG22E2RYF7 251 aa14.32□□□□□ -0.12
RABGGTA-202ENST00000399409 DNAH10Q8IVF4 4471 aa14.32□□□□□ -0.12
RABGGTA-202ENST00000399409 Q5XG85 94 aa14.29□□□□□ -0.12
RABGGTA-202ENST00000399409 KRTAP13-1Q8IUC0 172 aa14.25□□□□□ -0.13
RABGGTA-202ENST00000399409 PANO1I0J062 215 aa14.24□□□□□ -0.13
RABGGTA-202ENST00000399409 C5orf47Q569G3 176 aa14.24□□□□□ -0.13
RABGGTA-202ENST00000399409 DEFB116Q30KQ4 102 aa14.22□□□□□ -0.13
RABGGTA-202ENST00000399409 SPACA4Q8TDM5 124 aa14.22□□□□□ -0.13
RABGGTA-202ENST00000399409 SMIM26A0A096LP01 95 aa14.21□□□□□ -0.13
RABGGTA-202ENST00000399409 LYSTQ99698 3801 aa14.21□□□□□ -0.13
RABGGTA-202ENST00000399409 C4orf26Q17RF5 130 aa14.19□□□□□ -0.14
RABGGTA-202ENST00000399409 ZCCHC13Q8WW36 166 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-202ENST00000399409 A0A087WTM6 91 aa14.17□□□□□ -0.14
RABGGTA-202ENST00000399409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-202ENST00000399409 LINC00472Q9H8W2 130 aa14.16□□□□□ -0.14
RABGGTA-202ENST00000399409 WFDC13Q8IUB5 93 aa14.15□□□□□ -0.14
RABGGTA-202ENST00000399409 RPL37AP61513 92 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-202ENST00000399409 PRR15Q8IV56 129 aa14.14□□□□□ -0.15
RABGGTA-202ENST00000399409 A8MWP4 228 aa14.13□□□□□ -0.15
RABGGTA-202ENST00000399409 KRTAP29-1A8MX34 341 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-202ENST00000399409 PLECQ15149 4684 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-202ENST00000399409 HRCT1Q6UXD1 115 aa14.1□□□□□ -0.15
RABGGTA-202ENST00000399409 CSMD3Q7Z407 3707 aa14.09□□□□□ -0.15
RABGGTA-202ENST00000399409 CASC2Q6XLA1 102 aa14.08□□□□□ -0.15
RABGGTA-202ENST00000399409 LINC00483Q53H64 154 aa14.08□□□□□ -0.16
RABGGTA-202ENST00000399409 DNAH7Q8WXX0 4024 aa14.07□□□□□ -0.16
RABGGTA-202ENST00000399409 FP248Q71RG6 208 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-202ENST00000399409 ZNF706Q9Y5V0 76 aaPredicted RBP14.07□□□□□ -0.16
RABGGTA-202ENST00000399409 RTL8CO15255 209 aa14.07□□□□□ -0.16
RABGGTA-202ENST00000399409 MP68P56378 58 aa14.07□□□□□ -0.16
RABGGTA-202ENST00000399409 TENM2Q9NT68 2774 aa14.06□□□□□ -0.16
RABGGTA-202ENST00000399409 DNHD1Q96M86 4753 aa14.06□□□□□ -0.16
RABGGTA-202ENST00000399409 Q6ZR54 194 aa14.05□□□□□ -0.16
RABGGTA-202ENST00000399409 VPS13DQ5THJ4 4388 aa14.03□□□□□ -0.16
RABGGTA-202ENST00000399409 NDUFB1O75438 58 aa14.03□□□□□ -0.16
RABGGTA-202ENST00000399409 PLAC8Q9NZF1 115 aa14.02□□□□□ -0.17
RABGGTA-202ENST00000399409 IGLV9-49A0A0B4J1Y8 123 aa14.01□□□□□ -0.17
RABGGTA-202ENST00000399409 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
RABGGTA-202ENST00000399409 H3BPC8 53 aa14□□□□□ -0.17
RABGGTA-202ENST00000399409 PSORS1C2Q9UIG4 136 aa13.98□□□□□ -0.17
RABGGTA-202ENST00000399409 SRRM2Q9UQ35 2752 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-202ENST00000399409 FAM229BQ4G0N7 80 aa13.95□□□□□ -0.18
RABGGTA-202ENST00000399409 hDV103S1A0JD37 113 aa13.95□□□□□ -0.18
RABGGTA-202ENST00000399409 CYP4F30PQ9H0H9 118 aa13.95□□□□□ -0.18
RABGGTA-202ENST00000399409 TRAV22A0A0B4J277 110 aa13.94□□□□□ -0.18
RABGGTA-202ENST00000399409 MMP24-AS1A0A0U1RRL7 71 aa13.94□□□□□ -0.18
RABGGTA-202ENST00000399409 H0Y9P7 68 aa13.94□□□□□ -0.18
RABGGTA-202ENST00000399409 ZNF861PO60384 105 aa13.94□□□□□ -0.18
RABGGTA-202ENST00000399409 LINC00208Q96KT6 92 aa13.93□□□□□ -0.18
RABGGTA-202ENST00000399409 Q96NJ1 140 aa13.93□□□□□ -0.18
RABGGTA-202ENST00000399409 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
RABGGTA-202ENST00000399409 C1orf134Q5TEV5 83 aa13.91□□□□□ -0.18
RABGGTA-202ENST00000399409 STARD9Q9P2P6 4700 aa13.91□□□□□ -0.18
RABGGTA-202ENST00000399409 C1orf64Q8NEQ6 169 aa13.89□□□□□ -0.19
RABGGTA-202ENST00000399409 MOBPQ13875 183 aa13.87□□□□□ -0.19
RABGGTA-202ENST00000399409 ASB16-AS1Q495Z4 193 aa13.85□□□□□ -0.19
RABGGTA-202ENST00000399409 PRKDCP78527 4128 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-202ENST00000399409 SPANXA2-OT1Q8N9U9 137 aa13.84□□□□□ -0.19
RABGGTA-202ENST00000399409 MPLKIPQ8TAP9 179 aa13.82□□□□□ -0.2
RABGGTA-202ENST00000399409 TP53AIP1Q9HCN2 124 aa13.81□□□□□ -0.2
RABGGTA-202ENST00000399409 C8orf17Q9NRJ1 99 aa13.81□□□□□ -0.2
RABGGTA-202ENST00000399409 DNAH17Q9UFH2 4485 aa13.81□□□□□ -0.2
RABGGTA-202ENST00000399409 HECTD4Q9Y4D8 3996 aa13.79□□□□□ -0.2
RABGGTA-202ENST00000399409 A0A1B0GVX0 72 aa13.79□□□□□ -0.2
RABGGTA-202ENST00000399409 CDK2AP2O75956 126 aa13.78□□□□□ -0.2
RABGGTA-202ENST00000399409 IGLV7-43P04211 117 aa13.78□□□□□ -0.2
RABGGTA-202ENST00000399409 PRR4Q16378 134 aa13.78□□□□□ -0.2
RABGGTA-202ENST00000399409 ANAPC11Q9NYG5 84 aa13.78□□□□□ -0.2
RABGGTA-202ENST00000399409 LINC00336Q6ZUF6 198 aa13.77□□□□□ -0.21
RABGGTA-202ENST00000399409 LY6G6CO95867 125 aa13.74□□□□□ -0.21
RABGGTA-202ENST00000399409 IGHV6-1A0A0B4J1U7 121 aa13.73□□□□□ -0.21
RABGGTA-202ENST00000399409 Q1T7F1 81 aa13.73□□□□□ -0.21
RABGGTA-202ENST00000399409 PRO0628Q9UI54 55 aa13.71□□□□□ -0.21
RABGGTA-202ENST00000399409 CD164Q04900 197 aa13.68□□□□□ -0.22
RABGGTA-202ENST00000399409 MEGF8Q7Z7M0 2845 aa13.67□□□□□ -0.22
RABGGTA-202ENST00000399409 DNAH2Q9P225 4427 aa13.67□□□□□ -0.22
RABGGTA-202ENST00000399409 MRPL34Q9BQ48 92 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-202ENST00000399409 SSBP3-AS1Q7Z2R9 100 aa13.64□□□□□ -0.23
RABGGTA-202ENST00000399409 DNAH8Q96JB1 4490 aa13.64□□□□□ -0.23
RABGGTA-202ENST00000399409 KMT2AQ03164 3969 aa13.62□□□□□ -0.23
RABGGTA-202ENST00000399409 NDUFS5O43920 106 aa13.62□□□□□ -0.23
RABGGTA-202ENST00000399409 IGLV7-46A0A075B6I9 117 aa13.61□□□□□ -0.23
RABGGTA-202ENST00000399409 CIRBP-AS1Q8TBR5 109 aa13.61□□□□□ -0.23
RABGGTA-202ENST00000399409 V9GYY9 64 aa13.6□□□□□ -0.23
RABGGTA-202ENST00000399409 FBN3Q75N90 2809 aa13.6□□□□□ -0.23
RABGGTA-202ENST00000399409 DNAH6Q9C0G6 4158 aa13.58□□□□□ -0.24
RABGGTA-202ENST00000399409 KRTAP10-2P60368 255 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms