RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
UBE2D3-207ENST00000394801 SPRR4Q96PI1 79 aa9.64□□□□□ -0.87
UBE2D3-207ENST00000394801 Q8NBF4 154 aa9.64□□□□□ -0.87
UBE2D3-207ENST00000394801 PKIGQ9Y2B9 76 aa9.63□□□□□ -0.87
UBE2D3-207ENST00000394801 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
UBE2D3-207ENST00000394801 BPY2O14599 106 aa9.61□□□□□ -0.87
UBE2D3-207ENST00000394801 STARD9Q9P2P6 4700 aa9.61□□□□□ -0.87
UBE2D3-207ENST00000394801 PRLHP81277 87 aa9.6□□□□□ -0.87
UBE2D3-207ENST00000394801 H0Y9J4 135 aa9.6□□□□□ -0.87
UBE2D3-207ENST00000394801 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
UBE2D3-207ENST00000394801 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
UBE2D3-207ENST00000394801 LINC00474Q9P2X8 69 aa9.59□□□□□ -0.87
UBE2D3-207ENST00000394801 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
UBE2D3-207ENST00000394801 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
UBE2D3-207ENST00000394801 TMEM254Q8TBM7 123 aa9.59□□□□□ -0.87
UBE2D3-207ENST00000394801 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
UBE2D3-207ENST00000394801 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
UBE2D3-207ENST00000394801 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
UBE2D3-207ENST00000394801 MEGF8Q7Z7M0 2845 aa9.57□□□□□ -0.88
UBE2D3-207ENST00000394801 HIGD2AQ9BW72 106 aa9.57□□□□□ -0.88
UBE2D3-207ENST00000394801 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
UBE2D3-207ENST00000394801 Q8N9L7 120 aa9.56□□□□□ -0.88
UBE2D3-207ENST00000394801 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
UBE2D3-207ENST00000394801 SPRR1BP22528 89 aa9.54□□□□□ -0.88
UBE2D3-207ENST00000394801 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
UBE2D3-207ENST00000394801 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
UBE2D3-207ENST00000394801 PANO1I0J062 215 aa9.53□□□□□ -0.88
UBE2D3-207ENST00000394801 A0A0U1RQV1 116 aa9.52□□□□□ -0.89
UBE2D3-207ENST00000394801 A0A087WTM6 91 aa9.5□□□□□ -0.89
UBE2D3-207ENST00000394801 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-207ENST00000394801 UBE2AP49459 152 aa9.49□□□□□ -0.89
UBE2D3-207ENST00000394801 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
UBE2D3-207ENST00000394801 DNAH2Q9P225 4427 aa9.49□□□□□ -0.89
UBE2D3-207ENST00000394801 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
UBE2D3-207ENST00000394801 DSCR10P59022 87 aa9.48□□□□□ -0.89
UBE2D3-207ENST00000394801 Q6ZR54 194 aa9.48□□□□□ -0.89
UBE2D3-207ENST00000394801 A0A0G2JQZ4 141 aa9.47□□□□□ -0.89
UBE2D3-207ENST00000394801 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.89
UBE2D3-207ENST00000394801 TGP01266 2768 aa9.46□□□□□ -0.9
UBE2D3-207ENST00000394801 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
UBE2D3-207ENST00000394801 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.9
UBE2D3-207ENST00000394801 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
UBE2D3-207ENST00000394801 A0A087WSZ3 146 aa9.42□□□□□ -0.9
UBE2D3-207ENST00000394801 K7EQZ3 153 aa9.42□□□□□ -0.9
UBE2D3-207ENST00000394801 FAM229BQ4G0N7 80 aa9.42□□□□□ -0.9
UBE2D3-207ENST00000394801 LCE6AA0A183 80 aa9.41□□□□□ -0.9
UBE2D3-207ENST00000394801 RTL8CO15255 209 aa9.41□□□□□ -0.9
UBE2D3-207ENST00000394801 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
UBE2D3-207ENST00000394801 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
UBE2D3-207ENST00000394801 DNAH8Q96JB1 4490 aa9.35□□□□□ -0.91
UBE2D3-207ENST00000394801 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
UBE2D3-207ENST00000394801 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
UBE2D3-207ENST00000394801 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
UBE2D3-207ENST00000394801 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
UBE2D3-207ENST00000394801 DEFB116Q30KQ4 102 aa9.34□□□□□ -0.91
UBE2D3-207ENST00000394801 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
UBE2D3-207ENST00000394801 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
UBE2D3-207ENST00000394801 ZCCHC13Q8WW36 166 aaKnown RBP9.32□□□□□ -0.92
UBE2D3-207ENST00000394801 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
UBE2D3-207ENST00000394801 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
UBE2D3-207ENST00000394801 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
UBE2D3-207ENST00000394801 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
UBE2D3-207ENST00000394801 ZNF706Q9Y5V0 76 aaPredicted RBP9.29□□□□□ -0.92
UBE2D3-207ENST00000394801 DNAH6Q9C0G6 4158 aa9.29□□□□□ -0.92
UBE2D3-207ENST00000394801 ZNF861PO60384 105 aa9.27□□□□□ -0.93
UBE2D3-207ENST00000394801 PRR15Q8IV56 129 aa9.27□□□□□ -0.93
UBE2D3-207ENST00000394801 A8MWP4 228 aa9.27□□□□□ -0.93
UBE2D3-207ENST00000394801 LY6G6CO95867 125 aa9.27□□□□□ -0.93
UBE2D3-207ENST00000394801 KRTAP29-1A8MX34 341 aaPredicted RBP9.26□□□□□ -0.93
UBE2D3-207ENST00000394801 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
UBE2D3-207ENST00000394801 IGLV9-49A0A0B4J1Y8 123 aa9.25□□□□□ -0.93
UBE2D3-207ENST00000394801 Q1T7F1 81 aa9.25□□□□□ -0.93
UBE2D3-207ENST00000394801 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
UBE2D3-207ENST00000394801 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
UBE2D3-207ENST00000394801 DNAH11Q96DT5 4516 aa9.23□□□□□ -0.93
UBE2D3-207ENST00000394801 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
UBE2D3-207ENST00000394801 DNAH5Q8TE73 4624 aa9.22□□□□□ -0.93
UBE2D3-207ENST00000394801 C1orf195Q5TG92 126 aa9.22□□□□□ -0.93
UBE2D3-207ENST00000394801 FRAS1Q86XX4 4008 aa9.22□□□□□ -0.93
UBE2D3-207ENST00000394801 Q96NJ1 140 aa9.2□□□□□ -0.94
UBE2D3-207ENST00000394801 NDUFB1O75438 58 aa9.2□□□□□ -0.94
UBE2D3-207ENST00000394801 CASC2Q6XLA1 102 aa9.19□□□□□ -0.94
UBE2D3-207ENST00000394801 KMT2CQ8NEZ4 4911 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-207ENST00000394801 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
UBE2D3-207ENST00000394801 MOBPQ13875 183 aa9.17□□□□□ -0.94
UBE2D3-207ENST00000394801 RYR3Q15413 4870 aa9.16□□□□□ -0.94
UBE2D3-207ENST00000394801 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
UBE2D3-207ENST00000394801 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
UBE2D3-207ENST00000394801 ALMS1Q8TCU4 4167 aa9.15□□□□□ -0.94
UBE2D3-207ENST00000394801 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
UBE2D3-207ENST00000394801 MP68P56378 58 aa9.14□□□□□ -0.95
UBE2D3-207ENST00000394801 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
UBE2D3-207ENST00000394801 PKD1P98161 4303 aa9.12□□□□□ -0.95
UBE2D3-207ENST00000394801 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
UBE2D3-207ENST00000394801 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
UBE2D3-207ENST00000394801 V9GYY9 64 aa9.11□□□□□ -0.95
UBE2D3-207ENST00000394801 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
UBE2D3-207ENST00000394801 PRR4Q16378 134 aa9.1□□□□□ -0.95
UBE2D3-207ENST00000394801 Q6ZSA8 131 aa9.1□□□□□ -0.95
UBE2D3-207ENST00000394801 H3BPC8 53 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms