RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
RTN4-205ENST00000394609 LAMTOR3Q9UHA4 124 aa4.47□□□□□ -1.69
RTN4-205ENST00000394609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
RTN4-205ENST00000394609 VPS13DQ5THJ4 4388 aa4.47□□□□□ -1.69
RTN4-205ENST00000394609 A0A1B0GW54 56 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 LRCOL1A6NCL2 159 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 F8WEM9 126 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 VPREB1P12018 145 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 SERTAD4-AS1Q5TG53 156 aa4.46□□□□□ -1.7
RTN4-205ENST00000394609 IGLV6-57P01721 117 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 C6orf99Q4VX62 202 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 Q6ZR54 194 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 CNBPP62633 177 aaKnown RBP4.45□□□□□ -1.7
RTN4-205ENST00000394609 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
RTN4-205ENST00000394609 IGKV2-24A0A0C4DH68 120 aa4.44□□□□□ -1.7
RTN4-205ENST00000394609 M0R378 163 aa4.44□□□□□ -1.7
RTN4-205ENST00000394609 FUSP35637 526 aaKnown RBP eCLIP4.44□□□□□ -1.7
RTN4-205ENST00000394609 HAMPP81172 84 aa4.44□□□□□ -1.7
RTN4-205ENST00000394609 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
RTN4-205ENST00000394609 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
RTN4-205ENST00000394609 A0A096LNI7 61 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 NREPQ16612 68 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 A0A087WTM6 91 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 C3orf84H3BNL1 204 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 C1orf134Q5TEV5 83 aa4.43□□□□□ -1.7
RTN4-205ENST00000394609 RPL37AP8A6NKH3 93 aa4.42□□□□□ -1.7
RTN4-205ENST00000394609 BPY2O14599 106 aa4.42□□□□□ -1.7
RTN4-205ENST00000394609 CHTF8P0CG12 524 aa4.42□□□□□ -1.7
RTN4-205ENST00000394609 COX7BP24311 80 aa4.42□□□□□ -1.7
RTN4-205ENST00000394609 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
RTN4-205ENST00000394609 A0A0U1RQV1 116 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 PRYO14603 147 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 ZNF73O43830 326 aaPredicted RBP4.41□□□□□ -1.7
RTN4-205ENST00000394609 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 LCE6AA0A183 80 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 Q6ZQY7 126 aa4.41□□□□□ -1.7
RTN4-205ENST00000394609 ELOF1P60002 83 aaKnown RBP4.4□□□□□ -1.71
RTN4-205ENST00000394609 V9GYY9 64 aa4.4□□□□□ -1.71
RTN4-205ENST00000394609 PANO1I0J062 215 aa4.39□□□□□ -1.71
RTN4-205ENST00000394609 C1orf195Q5TG92 126 aa4.39□□□□□ -1.71
RTN4-205ENST00000394609 MRPL55Q7Z7F7 128 aaKnown RBP4.39□□□□□ -1.71
RTN4-205ENST00000394609 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
RTN4-205ENST00000394609 IGLV1-50A0A075B6I6 118 aa4.38□□□□□ -1.71
RTN4-205ENST00000394609 IGKV4-1P06312 121 aa4.38□□□□□ -1.71
RTN4-205ENST00000394609 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
RTN4-205ENST00000394609 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
RTN4-205ENST00000394609 RTL8CO15255 209 aa4.37□□□□□ -1.71
RTN4-205ENST00000394609 Q1T7F1 81 aa4.37□□□□□ -1.71
RTN4-205ENST00000394609 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
RTN4-205ENST00000394609 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
RTN4-205ENST00000394609 IGLV5-52A0A0A0MRZ9 124 aa4.36□□□□□ -1.71
RTN4-205ENST00000394609 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
RTN4-205ENST00000394609 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 PKIGQ9Y2B9 76 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 hDV103S1A0JD37 113 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 SEC61GP60059 68 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
RTN4-205ENST00000394609 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
RTN4-205ENST00000394609 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
RTN4-205ENST00000394609 SPRR1AP35321 89 aa4.34□□□□□ -1.71
RTN4-205ENST00000394609 UBE2BP63146 152 aa4.34□□□□□ -1.71
RTN4-205ENST00000394609 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
RTN4-205ENST00000394609 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
RTN4-205ENST00000394609 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
RTN4-205ENST00000394609 Q6ZRX8 168 aa4.33□□□□□ -1.72
RTN4-205ENST00000394609 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
RTN4-205ENST00000394609 Q9BRP9 147 aa4.33□□□□□ -1.72
RTN4-205ENST00000394609 DNAH17Q9UFH2 4485 aa4.33□□□□□ -1.72
RTN4-205ENST00000394609 NDUFB1O75438 58 aa4.32□□□□□ -1.72
RTN4-205ENST00000394609 DEFB105AQ8NG35 78 aa4.32□□□□□ -1.72
RTN4-205ENST00000394609 HYDINQ4G0P3 5121 aa4.32□□□□□ -1.72
RTN4-205ENST00000394609 PRLHP81277 87 aa4.32□□□□□ -1.72
RTN4-205ENST00000394609 FAM229BQ4G0N7 80 aa4.32□□□□□ -1.72
RTN4-205ENST00000394609 SCXQ7RTU7 201 aa4.31□□□□□ -1.72
RTN4-205ENST00000394609 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
RTN4-205ENST00000394609 ST20-AS1Q8NBB2 130 aa4.3□□□□□ -1.72
RTN4-205ENST00000394609 DHRS4-AS1Q9P1J3 65 aa4.3□□□□□ -1.72
RTN4-205ENST00000394609 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
RTN4-205ENST00000394609 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
RTN4-205ENST00000394609 HIGD2AQ9BW72 106 aa4.3□□□□□ -1.72
RTN4-205ENST00000394609 SRRM2Q9UQ35 2752 aaKnown RBP4.3□□□□□ -1.72
RTN4-205ENST00000394609 SPRR4Q96PI1 79 aa4.29□□□□□ -1.72
RTN4-205ENST00000394609 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
RTN4-205ENST00000394609 H3BPC8 53 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 KRTAP10-1P60331 282 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 Q8N377 158 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms