RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 IGKV2D-28P01615 120 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 LINC00242Q5T6M2 205 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.76□□□□□ -2.13
TRAV41-201ENST00000390468 NOTCH2NLQ7Z3S9 236 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 SMIM29Q86T20 159 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 DEFB104AQ8WTQ1 72 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
TRAV41-201ENST00000390468 C16orf74Q96GX8 76 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 XAGE1AQ9HD64 81 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 TOMM7Q9P0U1 55 aa1.76□□□□□ -2.13
TRAV41-201ENST00000390468 IGLV5-37A0A075B6J1 123 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 TRGV1A0A0A0MS02 117 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 H0Y9P7 68 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 CCL18P55774 89 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 PRR3P79522 188 aaKnown RBP1.75□□□□□ -2.13
TRAV41-201ENST00000390468 COX17Q14061 63 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 PRR4Q16378 134 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 LINC00575Q6W349 94 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 LINC01558Q9Y6Z2 57 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 MAST4O15021 2626 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
TRAV41-201ENST00000390468 STAB1Q9NY15 2570 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 DNAH7Q8WXX0 4024 aa1.75□□□□□ -2.13
TRAV41-201ENST00000390468 IGLV4-60A0A075B6I1 120 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.74□□□□□ -2.13
TRAV41-201ENST00000390468 IGLV5-52A0A0A0MRZ9 124 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 IGHV3-53P01767 116 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 EGFEM1PQ0D2K5 195 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 DEFB135Q30KP9 77 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 SPAG11AQ6PDA7 123 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 Q6ZQY7 126 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 KCNQ1DNQ9H478 68 aa1.74□□□□□ -2.13
TRAV41-201ENST00000390468 NOP10Q9NPE3 64 aaKnown RBP1.74□□□□□ -2.13
TRAV41-201ENST00000390468 DNAH9Q9NYC9 4486 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 TRGV4A0A0C4DH28 118 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 A8MU10 97 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 PRB2P02812 416 aaPredicted RBP1.73□□□□□ -2.13
TRAV41-201ENST00000390468 GIG44P09565 113 aaPredicted RBP1.73□□□□□ -2.13
TRAV41-201ENST00000390468 COX6A2Q02221 97 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 COA5Q86WW8 74 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 CSNK1G2-AS1Q8NCQ2 148 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 PRAC1Q96KF2 57 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 TENM1Q9UKZ4 2725 aa1.73□□□□□ -2.13
TRAV41-201ENST00000390468 DEFB130BP0DP73 79 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 DEFB130AP0DP74 79 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 Q8IZM0 81 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 Q8N9L7 120 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 FAM104AQ969W3 186 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 COL6A5A8TX70 2615 aa1.72□□□□□ -2.13
TRAV41-201ENST00000390468 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
TRAV41-201ENST00000390468 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
TRAV41-201ENST00000390468 LYSTQ99698 3801 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 DEFB4AO15263 64 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 SPART-AS1P0CW21 52 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 C1orf134Q5TEV5 83 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 LINC00612Q8N6U2 182 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 Q8NAQ8 132 aa1.71□□□□□ -2.14
TRAV41-201ENST00000390468 CHCHD10Q8WYQ3 142 aaPredicted RBP1.71□□□□□ -2.14
TRAV41-201ENST00000390468 DNAH6Q9C0G6 4158 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 VWFP04275 2813 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 IGLV9-49A0A0B4J1Y8 123 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 A0A0J9YWU9 116 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 K7EIL1 84 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 M0R2N4 97 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 CDK2AP2O75956 126 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 HTN3P15516 51 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 ROMO1P60602 79 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 CNBPP62633 177 aaKnown RBP1.7□□□□□ -2.14
TRAV41-201ENST00000390468 REG3AQ06141 175 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 KPRPQ5T749 579 aaPredicted RBP1.7□□□□□ -2.14
TRAV41-201ENST00000390468 CSAG1Q6PB30 78 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 PRO0255Q9UI72 69 aa1.7□□□□□ -2.14
TRAV41-201ENST00000390468 PRKDCP78527 4128 aaKnown RBP1.7□□□□□ -2.14
TRAV41-201ENST00000390468 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
TRAV41-201ENST00000390468 IGLV7-46A0A075B6I9 117 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 A0A096LPF7 62 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 K7ERS5 55 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 UQCR11O14957 56 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 RTL8CO15255 209 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 SPINK7P58062 85 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 REG3GQ6UW15 175 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 PLAC8Q9NZF1 115 aa1.69□□□□□ -2.14
TRAV41-201ENST00000390468 CSMD3Q7Z407 3707 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 STARD9Q9P2P6 4700 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 NOTCH1P46531 2555 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 FBN1P35555 2871 aaKnown RBP1.68□□□□□ -2.14
TRAV41-201ENST00000390468 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 A0A1B0GU69 56 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 A0A1W2PNM2 257 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 KRTAP16-1A8MUX0 517 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 K7EQZ3 153 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 IGLV6-57P01721 117 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 KRTAP21-3Q3LHN1 58 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
TRAV41-201ENST00000390468 KLK12Q9UKR0 248 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms