RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 PANO1I0J062 215 aa12.46□□□□□ -0.41
LHX3-202ENST00000371748 IGLV5-48A0A075B6I7 105 aa12.45□□□□□ -0.42
LHX3-202ENST00000371748 DNAH2Q9P225 4427 aa12.45□□□□□ -0.42
LHX3-202ENST00000371748 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
LHX3-202ENST00000371748 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
LHX3-202ENST00000371748 A0A087WTM6 91 aa12.44□□□□□ -0.42
LHX3-202ENST00000371748 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
LHX3-202ENST00000371748 Q6ZR54 194 aa12.44□□□□□ -0.42
LHX3-202ENST00000371748 C3orf84H3BNL1 204 aa12.43□□□□□ -0.42
LHX3-202ENST00000371748 PKIGQ9Y2B9 76 aa12.42□□□□□ -0.42
LHX3-202ENST00000371748 OCR1Q9BZK8 76 aa12.42□□□□□ -0.42
LHX3-202ENST00000371748 TGP01266 2768 aa12.41□□□□□ -0.42
LHX3-202ENST00000371748 HECTD4Q9Y4D8 3996 aa12.41□□□□□ -0.42
LHX3-202ENST00000371748 FP248Q71RG6 208 aaPredicted RBP12.4□□□□□ -0.42
LHX3-202ENST00000371748 HIGD2AQ9BW72 106 aa12.4□□□□□ -0.42
LHX3-202ENST00000371748 LINC00474Q9P2X8 69 aa12.4□□□□□ -0.42
LHX3-202ENST00000371748 TNP2Q05952 138 aa12.39□□□□□ -0.43
LHX3-202ENST00000371748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.38□□□□□ -0.43
LHX3-202ENST00000371748 SMIM26A0A096LP01 95 aa12.37□□□□□ -0.43
LHX3-202ENST00000371748 LY6G6CO95867 125 aa12.36□□□□□ -0.43
LHX3-202ENST00000371748 ATP5EP56381 51 aaPredicted RBP12.36□□□□□ -0.43
LHX3-202ENST00000371748 C1orf137Q5JT78 98 aa12.35□□□□□ -0.43
LHX3-202ENST00000371748 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
LHX3-202ENST00000371748 A0A0U1RQV1 116 aa12.35□□□□□ -0.43
LHX3-202ENST00000371748 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
LHX3-202ENST00000371748 RTL8CO15255 209 aa12.34□□□□□ -0.43
LHX3-202ENST00000371748 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.44
LHX3-202ENST00000371748 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
LHX3-202ENST00000371748 A0A1W2PNM2 257 aa12.32□□□□□ -0.44
LHX3-202ENST00000371748 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
LHX3-202ENST00000371748 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
LHX3-202ENST00000371748 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
LHX3-202ENST00000371748 UBE2AP49459 152 aa12.29□□□□□ -0.44
LHX3-202ENST00000371748 A0A1B0GW54 56 aa12.28□□□□□ -0.44
LHX3-202ENST00000371748 H0Y9J4 135 aa12.28□□□□□ -0.44
LHX3-202ENST00000371748 LINC00476Q8WZB0 136 aa12.28□□□□□ -0.44
LHX3-202ENST00000371748 A0A0G2JQZ4 141 aa12.27□□□□□ -0.45
LHX3-202ENST00000371748 Q8NBF4 154 aa12.27□□□□□ -0.45
LHX3-202ENST00000371748 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
LHX3-202ENST00000371748 DNAH6Q9C0G6 4158 aa12.25□□□□□ -0.45
LHX3-202ENST00000371748 FAM229BQ4G0N7 80 aa12.25□□□□□ -0.45
LHX3-202ENST00000371748 IGLV5-52A0A0A0MRZ9 124 aa12.24□□□□□ -0.45
LHX3-202ENST00000371748 SPRR4Q96PI1 79 aa12.22□□□□□ -0.45
LHX3-202ENST00000371748 FAM30AQ9NZY2 134 aa12.22□□□□□ -0.45
LHX3-202ENST00000371748 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
LHX3-202ENST00000371748 PRO0628Q9UI54 55 aa12.22□□□□□ -0.45
LHX3-202ENST00000371748 KRTAP13-1Q8IUC0 172 aa12.21□□□□□ -0.45
LHX3-202ENST00000371748 LCE6AA0A183 80 aa12.2□□□□□ -0.46
LHX3-202ENST00000371748 DSCR10P59022 87 aa12.19□□□□□ -0.46
LHX3-202ENST00000371748 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
LHX3-202ENST00000371748 FRAS1Q86XX4 4008 aa12.18□□□□□ -0.46
LHX3-202ENST00000371748 SPRR1BP22528 89 aa12.18□□□□□ -0.46
LHX3-202ENST00000371748 IGLV8-61A0A075B6I0 122 aa12.17□□□□□ -0.46
LHX3-202ENST00000371748 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
LHX3-202ENST00000371748 PLAC8Q9NZF1 115 aa12.16□□□□□ -0.46
LHX3-202ENST00000371748 HYDINQ4G0P3 5121 aa12.15□□□□□ -0.46
LHX3-202ENST00000371748 K7EQZ3 153 aa12.15□□□□□ -0.46
LHX3-202ENST00000371748 PSORS1C2Q9UIG4 136 aa12.14□□□□□ -0.47
LHX3-202ENST00000371748 MPLKIPQ8TAP9 179 aa12.12□□□□□ -0.47
LHX3-202ENST00000371748 DNAH5Q8TE73 4624 aa12.11□□□□□ -0.47
LHX3-202ENST00000371748 ZCCHC13Q8WW36 166 aaKnown RBP12.11□□□□□ -0.47
LHX3-202ENST00000371748 DNAH11Q96DT5 4516 aa12.11□□□□□ -0.47
LHX3-202ENST00000371748 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
LHX3-202ENST00000371748 A0A087WSZ3 146 aa12.08□□□□□ -0.48
LHX3-202ENST00000371748 hDV103S1A0JD37 113 aa12.06□□□□□ -0.48
LHX3-202ENST00000371748 HCG22E2RYF7 251 aa12.05□□□□□ -0.48
LHX3-202ENST00000371748 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
LHX3-202ENST00000371748 BRK1Q8WUW1 75 aa12.03□□□□□ -0.48
LHX3-202ENST00000371748 FAT2Q9NYQ8 4349 aa12.02□□□□□ -0.49
LHX3-202ENST00000371748 IGLV9-49A0A0B4J1Y8 123 aa12.02□□□□□ -0.49
LHX3-202ENST00000371748 ZNF861PO60384 105 aa12.01□□□□□ -0.49
LHX3-202ENST00000371748 C1orf64Q8NEQ6 169 aa12.01□□□□□ -0.49
LHX3-202ENST00000371748 PKD1P98161 4303 aa12.01□□□□□ -0.49
LHX3-202ENST00000371748 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
LHX3-202ENST00000371748 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
LHX3-202ENST00000371748 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
LHX3-202ENST00000371748 ZNF706Q9Y5V0 76 aaPredicted RBP11.97□□□□□ -0.49
LHX3-202ENST00000371748 IGLV7-43P04211 117 aa11.94□□□□□ -0.5
LHX3-202ENST00000371748 KRTAP10-1P60331 282 aa11.93□□□□□ -0.5
LHX3-202ENST00000371748 WFDC13Q8IUB5 93 aa11.93□□□□□ -0.5
LHX3-202ENST00000371748 CYP4F30PQ9H0H9 118 aa11.92□□□□□ -0.5
LHX3-202ENST00000371748 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
LHX3-202ENST00000371748 Q1T7F1 81 aa11.91□□□□□ -0.5
LHX3-202ENST00000371748 PRR4Q16378 134 aa11.9□□□□□ -0.5
LHX3-202ENST00000371748 MOBPQ13875 183 aa11.9□□□□□ -0.51
LHX3-202ENST00000371748 KRTAP29-1A8MX34 341 aaPredicted RBP11.89□□□□□ -0.51
LHX3-202ENST00000371748 Q6ZSA8 131 aa11.88□□□□□ -0.51
LHX3-202ENST00000371748 SACSQ9NZJ4 4579 aa11.88□□□□□ -0.51
LHX3-202ENST00000371748 LINC00472Q9H8W2 130 aa11.87□□□□□ -0.51
LHX3-202ENST00000371748 NDUFB1O75438 58 aa11.87□□□□□ -0.51
LHX3-202ENST00000371748 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
LHX3-202ENST00000371748 MP68P56378 58 aa11.85□□□□□ -0.51
LHX3-202ENST00000371748 LRP1BQ9NZR2 4599 aa11.83□□□□□ -0.51
LHX3-202ENST00000371748 LINC00208Q96KT6 92 aa11.83□□□□□ -0.52
LHX3-202ENST00000371748 PRR15Q8IV56 129 aa11.81□□□□□ -0.52
LHX3-202ENST00000371748 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
LHX3-202ENST00000371748 A8MWP4 228 aa11.78□□□□□ -0.52
LHX3-202ENST00000371748 PSPHP1O15172 72 aa11.77□□□□□ -0.52
LHX3-202ENST00000371748 Q96NJ1 140 aa11.77□□□□□ -0.52
LHX3-202ENST00000371748 H0Y9P7 68 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms