RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 JOSD1Q15040 202 aaPredicted RBP2.78□□□□□ -1.96
RNU4-4P-201ENST00000364588 SOSTDC1Q6X4U4 206 aa2.78□□□□□ -1.96
RNU4-4P-201ENST00000364588 PMCHL2Q9BQD1 86 aa2.78□□□□□ -1.96
RNU4-4P-201ENST00000364588 LEPROTL1O95214 131 aa2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 NDUFC2O95298 119 aa2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 LGALS3P17931 250 aaKnown RBP2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 HERVK_113P61574 105 aa2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 YPEL4Q96NS1 127 aa2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 LIMD2Q9BT23 127 aa2.77□□□□□ -1.97
RNU4-4P-201ENST00000364588 A0A0J9YXY3 114 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 H7C2G1 150 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 DPM2O94777 84 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 SNAPINO95295 136 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 FABP4P15090 132 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 PLNP26678 52 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 NMUP48645 174 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 HINT1P49773 126 aaPredicted RBP2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 NDUFA5Q16718 116 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 SVBPQ8N300 66 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 OR13C6PQ8NH95 151 aa2.76□□□□□ -1.97
RNU4-4P-201ENST00000364588 M0R2T5 61 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 IGKCP01834 107 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 SPRR1BP22528 89 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 SLC25A34Q6PIV7 304 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 DEFB105AQ8NG35 78 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
RNU4-4P-201ENST00000364588 A0A0G2JQZ4 141 aa2.74□□□□□ -1.97
RNU4-4P-201ENST00000364588 TRGC2P03986 189 aa2.74□□□□□ -1.97
RNU4-4P-201ENST00000364588 TAL2Q16559 108 aa2.74□□□□□ -1.97
RNU4-4P-201ENST00000364588 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
RNU4-4P-201ENST00000364588 HSPB8Q9UJY1 196 aa2.74□□□□□ -1.97
RNU4-4P-201ENST00000364588 E9PLD3 99 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 COX7BP24311 80 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 LINC00308Q8TCZ7 52 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 PRO1933Q9H354 126 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 SPANXCQ9NY87 97 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 CBY1Q9Y3M2 126 aa2.73□□□□□ -1.97
RNU4-4P-201ENST00000364588 ELOF1P60002 83 aaKnown RBP2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 CD164Q04900 197 aa2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 C1orf195Q5TG92 126 aa2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 CEND1Q8N111 149 aa2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 SPANXDQ9BXN6 97 aa2.72□□□□□ -1.97
RNU4-4P-201ENST00000364588 TEX49A0A1B0GTD5 131 aa2.71□□□□□ -1.98
RNU4-4P-201ENST00000364588 AKR1D1P51857 326 aa2.71□□□□□ -1.98
RNU4-4P-201ENST00000364588 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
RNU4-4P-201ENST00000364588 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
RNU4-4P-201ENST00000364588 ZNF815PA8K554 130 aa2.7□□□□□ -1.98
RNU4-4P-201ENST00000364588 TIMM17BO60830 172 aa2.7□□□□□ -1.98
RNU4-4P-201ENST00000364588 Q5XG85 94 aa2.7□□□□□ -1.98
RNU4-4P-201ENST00000364588 Q6Q795 121 aa2.7□□□□□ -1.98
RNU4-4P-201ENST00000364588 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
RNU4-4P-201ENST00000364588 SYS1-DBNDD2H3BUS1 97 aa2.69□□□□□ -1.98
RNU4-4P-201ENST00000364588 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
RNU4-4P-201ENST00000364588 A0A1B0GWB2 263 aa2.68□□□□□ -1.98
RNU4-4P-201ENST00000364588 A6NDN8 102 aa2.68□□□□□ -1.98
RNU4-4P-201ENST00000364588 Q8N9L7 120 aa2.68□□□□□ -1.98
RNU4-4P-201ENST00000364588 COLCA2A8K830 154 aa2.67□□□□□ -1.98
RNU4-4P-201ENST00000364588 TCL1BO95988 128 aa2.67□□□□□ -1.98
RNU4-4P-201ENST00000364588 LINC01545Q5VT33 79 aa2.67□□□□□ -1.98
RNU4-4P-201ENST00000364588 SCGB1D4Q6XE38 83 aa2.67□□□□□ -1.98
RNU4-4P-201ENST00000364588 PCP2Q8IVA1 136 aa2.67□□□□□ -1.98
RNU4-4P-201ENST00000364588 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
RNU4-4P-201ENST00000364588 OBSCN-AS1Q96MR7 158 aa2.66□□□□□ -1.98
RNU4-4P-201ENST00000364588 F8WEM9 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BKO60814 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BJP06899 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 C3orf79P0CE67 100 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 IFITM1P13164 125 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BOP23527 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BBP33778 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BDP58876 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 KRTDAPP60985 99 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BCP62807 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST2H2BEQ16778 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 ATP11AUNQ6ZP68 121 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 MUSTN1Q8IVN3 82 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BHQ93079 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BNQ99877 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 HIST1H2BMQ99879 126 aa2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 NHP2Q9NX24 153 aaKnown RBP2.65□□□□□ -1.99
RNU4-4P-201ENST00000364588 TRBV7-7A0A0K0K1E9 115 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 Q6ZQY7 126 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 SLC7A5P1Q8MH63 180 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 ATOH7Q8N100 152 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 COPS9Q8WXC6 57 aa2.64□□□□□ -1.99
RNU4-4P-201ENST00000364588 TRAV13-2A0A0B4J235 113 aa2.63□□□□□ -1.99
RNU4-4P-201ENST00000364588 Q6JHZ5 121 aa2.63□□□□□ -1.99
RNU4-4P-201ENST00000364588 LINC00575Q6W349 94 aa2.63□□□□□ -1.99
RNU4-4P-201ENST00000364588 CLEC2BQ92478 149 aa2.63□□□□□ -1.99
RNU4-4P-201ENST00000364588 Q96NJ1 140 aa2.63□□□□□ -1.99
RNU4-4P-201ENST00000364588 hADV29S1A0JD25 119 aa2.62□□□□□ -1.99
RNU4-4P-201ENST00000364588 C20orf202A1L168 122 aa2.62□□□□□ -1.99
RNU4-4P-201ENST00000364588 VAMP3Q15836 100 aa2.62□□□□□ -1.99
RNU4-4P-201ENST00000364588 OCIAD2Q56VL3 154 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms