RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 F8WEM9 126 aa14.19□□□□□ -0.14
LDB1-201ENST00000361198 PRLHP81277 87 aa14.19□□□□□ -0.14
LDB1-201ENST00000361198 PHF5AQ7RTV0 110 aaKnown RBP14.19□□□□□ -0.14
LDB1-201ENST00000361198 KMT2AQ03164 3969 aa14.19□□□□□ -0.14
LDB1-201ENST00000361198 KRTAP11-1Q8IUC1 163 aa14.18□□□□□ -0.14
LDB1-201ENST00000361198 TMEM254Q8TBM7 123 aa14.17□□□□□ -0.14
LDB1-201ENST00000361198 SERP1Q9Y6X1 66 aa14.17□□□□□ -0.14
LDB1-201ENST00000361198 Q5XG85 94 aa14.14□□□□□ -0.15
LDB1-201ENST00000361198 SMIM29Q86T20 159 aa14.14□□□□□ -0.15
LDB1-201ENST00000361198 PANO1I0J062 215 aa14.13□□□□□ -0.15
LDB1-201ENST00000361198 DNAH2Q9P225 4427 aa14.12□□□□□ -0.15
LDB1-201ENST00000361198 HIGD2AQ9BW72 106 aa14.11□□□□□ -0.15
LDB1-201ENST00000361198 PKIGQ9Y2B9 76 aa14.1□□□□□ -0.15
LDB1-201ENST00000361198 A0A0U1RQV1 116 aa14.09□□□□□ -0.15
LDB1-201ENST00000361198 LINC00474Q9P2X8 69 aa14.09□□□□□ -0.15
LDB1-201ENST00000361198 HECTD4Q9Y4D8 3996 aa14.08□□□□□ -0.16
LDB1-201ENST00000361198 ATP5EP56381 51 aaPredicted RBP14.08□□□□□ -0.16
LDB1-201ENST00000361198 A0A087WTM6 91 aa14.07□□□□□ -0.16
LDB1-201ENST00000361198 C5orf47Q569G3 176 aa14.07□□□□□ -0.16
LDB1-201ENST00000361198 SRRM2Q9UQ35 2752 aaKnown RBP14.07□□□□□ -0.16
LDB1-201ENST00000361198 DSCR10P59022 87 aa14.07□□□□□ -0.16
LDB1-201ENST00000361198 LINC00476Q8WZB0 136 aa14.06□□□□□ -0.16
LDB1-201ENST00000361198 TGP01266 2768 aa14.05□□□□□ -0.16
LDB1-201ENST00000361198 C4orf26Q17RF5 130 aa14.04□□□□□ -0.16
LDB1-201ENST00000361198 Q6ZR54 194 aa14.04□□□□□ -0.16
LDB1-201ENST00000361198 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.03□□□□□ -0.16
LDB1-201ENST00000361198 FBN3Q75N90 2809 aa14.02□□□□□ -0.17
LDB1-201ENST00000361198 IGLV8-61A0A075B6I0 122 aa14.01□□□□□ -0.17
LDB1-201ENST00000361198 LCE6AA0A183 80 aa14.01□□□□□ -0.17
LDB1-201ENST00000361198 H0Y9J4 135 aa14.01□□□□□ -0.17
LDB1-201ENST00000361198 IGFL1Q6UW32 110 aa14.01□□□□□ -0.17
LDB1-201ENST00000361198 SPACA4Q8TDM5 124 aa14.01□□□□□ -0.17
LDB1-201ENST00000361198 A0A0G2JQZ4 141 aa13.99□□□□□ -0.17
LDB1-201ENST00000361198 DNAH17Q9UFH2 4485 aa13.99□□□□□ -0.17
LDB1-201ENST00000361198 K7EQZ3 153 aa13.98□□□□□ -0.17
LDB1-201ENST00000361198 UBE2AP49459 152 aa13.97□□□□□ -0.17
LDB1-201ENST00000361198 FAM30AQ9NZY2 134 aa13.97□□□□□ -0.17
LDB1-201ENST00000361198 RTL8CO15255 209 aa13.95□□□□□ -0.18
LDB1-201ENST00000361198 SMIM26A0A096LP01 95 aa13.95□□□□□ -0.18
LDB1-201ENST00000361198 HRCT1Q6UXD1 115 aa13.94□□□□□ -0.18
LDB1-201ENST00000361198 KRTAP13-1Q8IUC0 172 aa13.91□□□□□ -0.18
LDB1-201ENST00000361198 SPRR1BP22528 89 aa13.9□□□□□ -0.18
LDB1-201ENST00000361198 FP248Q71RG6 208 aaPredicted RBP13.9□□□□□ -0.18
LDB1-201ENST00000361198 LY6G6CO95867 125 aa13.89□□□□□ -0.19
LDB1-201ENST00000361198 C1orf134Q5TEV5 83 aa13.89□□□□□ -0.19
LDB1-201ENST00000361198 HCG22E2RYF7 251 aa13.89□□□□□ -0.19
LDB1-201ENST00000361198 A0A087WSZ3 146 aa13.87□□□□□ -0.19
LDB1-201ENST00000361198 ZCCHC13Q8WW36 166 aaKnown RBP13.86□□□□□ -0.19
LDB1-201ENST00000361198 DNAH8Q96JB1 4490 aa13.85□□□□□ -0.19
LDB1-201ENST00000361198 IGLV5-52A0A0A0MRZ9 124 aa13.83□□□□□ -0.2
LDB1-201ENST00000361198 FRAS1Q86XX4 4008 aa13.81□□□□□ -0.2
LDB1-201ENST00000361198 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
LDB1-201ENST00000361198 DNAH6Q9C0G6 4158 aa13.8□□□□□ -0.2
LDB1-201ENST00000361198 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
LDB1-201ENST00000361198 PSORS1C2Q9UIG4 136 aa13.78□□□□□ -0.2
LDB1-201ENST00000361198 FAM229BQ4G0N7 80 aa13.74□□□□□ -0.21
LDB1-201ENST00000361198 DNAH5Q8TE73 4624 aa13.74□□□□□ -0.21
LDB1-201ENST00000361198 KRTAP29-1A8MX34 341 aaPredicted RBP13.74□□□□□ -0.21
LDB1-201ENST00000361198 WWC2-AS2Q96NR7 200 aa13.74□□□□□ -0.21
LDB1-201ENST00000361198 KRTAP21-3Q3LHN1 58 aa13.73□□□□□ -0.21
LDB1-201ENST00000361198 WFDC13Q8IUB5 93 aa13.72□□□□□ -0.21
LDB1-201ENST00000361198 RPL37AP61513 92 aaKnown RBP13.71□□□□□ -0.21
LDB1-201ENST00000361198 LINC00472Q9H8W2 130 aa13.71□□□□□ -0.21
LDB1-201ENST00000361198 DNAH11Q96DT5 4516 aa13.71□□□□□ -0.21
LDB1-201ENST00000361198 PRR15Q8IV56 129 aa13.69□□□□□ -0.22
LDB1-201ENST00000361198 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
LDB1-201ENST00000361198 ALMS1Q8TCU4 4167 aa13.67□□□□□ -0.22
LDB1-201ENST00000361198 IGLV9-49A0A0B4J1Y8 123 aa13.67□□□□□ -0.22
LDB1-201ENST00000361198 hDV103S1A0JD37 113 aa13.67□□□□□ -0.22
LDB1-201ENST00000361198 A8MWP4 228 aa13.67□□□□□ -0.22
LDB1-201ENST00000361198 LINC00483Q53H64 154 aa13.66□□□□□ -0.22
LDB1-201ENST00000361198 LINC00336Q6ZUF6 198 aa13.66□□□□□ -0.22
LDB1-201ENST00000361198 KRTAP10-2P60368 255 aa13.65□□□□□ -0.22
LDB1-201ENST00000361198 ZNF861PO60384 105 aa13.65□□□□□ -0.22
LDB1-201ENST00000361198 NDUFB1O75438 58 aa13.63□□□□□ -0.23
LDB1-201ENST00000361198 MP68P56378 58 aa13.63□□□□□ -0.23
LDB1-201ENST00000361198 CASC2Q6XLA1 102 aa13.63□□□□□ -0.23
LDB1-201ENST00000361198 CYP4F30PQ9H0H9 118 aa13.62□□□□□ -0.23
LDB1-201ENST00000361198 ZNF706Q9Y5V0 76 aaPredicted RBP13.62□□□□□ -0.23
LDB1-201ENST00000361198 C1orf64Q8NEQ6 169 aa13.61□□□□□ -0.23
LDB1-201ENST00000361198 ANAPC11Q9NYG5 84 aa13.59□□□□□ -0.23
LDB1-201ENST00000361198 FAT2Q9NYQ8 4349 aa13.59□□□□□ -0.23
LDB1-201ENST00000361198 MPLKIPQ8TAP9 179 aa13.58□□□□□ -0.24
LDB1-201ENST00000361198 TRAV22A0A0B4J277 110 aa13.57□□□□□ -0.24
LDB1-201ENST00000361198 PKD1P98161 4303 aa13.57□□□□□ -0.24
LDB1-201ENST00000361198 H3BPC8 53 aa13.56□□□□□ -0.24
LDB1-201ENST00000361198 PRO0628Q9UI54 55 aa13.56□□□□□ -0.24
LDB1-201ENST00000361198 CIRBP-AS1Q8TBR5 109 aa13.56□□□□□ -0.24
LDB1-201ENST00000361198 LINC00208Q96KT6 92 aa13.55□□□□□ -0.24
LDB1-201ENST00000361198 IGLV7-43P04211 117 aa13.55□□□□□ -0.24
LDB1-201ENST00000361198 MOBPQ13875 183 aa13.53□□□□□ -0.24
LDB1-201ENST00000361198 H0Y9P7 68 aa13.52□□□□□ -0.25
LDB1-201ENST00000361198 MMP24-AS1A0A0U1RRL7 71 aa13.51□□□□□ -0.25
LDB1-201ENST00000361198 Q96NJ1 140 aa13.5□□□□□ -0.25
LDB1-201ENST00000361198 SPANXA2-OT1Q8N9U9 137 aa13.47□□□□□ -0.25
LDB1-201ENST00000361198 KRTAP10-1P60331 282 aa13.47□□□□□ -0.25
LDB1-201ENST00000361198 PRR4Q16378 134 aa13.47□□□□□ -0.25
LDB1-201ENST00000361198 Q1T7F1 81 aa13.47□□□□□ -0.25
LDB1-201ENST00000361198 LRP1BQ9NZR2 4599 aa13.46□□□□□ -0.25
LDB1-201ENST00000361198 Q6ZSA8 131 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms