RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HAMPP81172 84 aa11.13□□□□□ -0.63
NPAS3-202ENST00000356141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.13□□□□□ -0.63
NPAS3-202ENST00000356141 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
NPAS3-202ENST00000356141 Q6ZRX8 168 aa11.13□□□□□ -0.63
NPAS3-202ENST00000356141 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
NPAS3-202ENST00000356141 A0A087WTM6 91 aa11.11□□□□□ -0.63
NPAS3-202ENST00000356141 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-202ENST00000356141 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
NPAS3-202ENST00000356141 Q8N377 158 aa11.1□□□□□ -0.63
NPAS3-202ENST00000356141 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
NPAS3-202ENST00000356141 SCXQ7RTU7 201 aa11.09□□□□□ -0.63
NPAS3-202ENST00000356141 KRTAP4-16G5E9R7 235 aaPredicted RBP11.08□□□□□ -0.63
NPAS3-202ENST00000356141 Q6ZQT0 140 aa11.08□□□□□ -0.64
NPAS3-202ENST00000356141 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
NPAS3-202ENST00000356141 C8orf87E5RJ46 101 aa11.08□□□□□ -0.64
NPAS3-202ENST00000356141 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
NPAS3-202ENST00000356141 PRYO14603 147 aa11.07□□□□□ -0.64
NPAS3-202ENST00000356141 DNAH11Q96DT5 4516 aa11.06□□□□□ -0.64
NPAS3-202ENST00000356141 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
NPAS3-202ENST00000356141 TNP2Q05952 138 aa11.06□□□□□ -0.64
NPAS3-202ENST00000356141 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
NPAS3-202ENST00000356141 RTL8CO15255 209 aa11.05□□□□□ -0.64
NPAS3-202ENST00000356141 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
NPAS3-202ENST00000356141 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
NPAS3-202ENST00000356141 Q6ZR54 194 aa11.04□□□□□ -0.64
NPAS3-202ENST00000356141 DNAH8Q96JB1 4490 aa11.03□□□□□ -0.64
NPAS3-202ENST00000356141 A0A0A0MQY5 61 aa11.03□□□□□ -0.64
NPAS3-202ENST00000356141 SPRR1AP35321 89 aa11.03□□□□□ -0.64
NPAS3-202ENST00000356141 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-202ENST00000356141 TRAV7A0A075B6U4 112 aa11.02□□□□□ -0.65
NPAS3-202ENST00000356141 KLKP1Q107X0 134 aa11□□□□□ -0.65
NPAS3-202ENST00000356141 PRR15Q8IV56 129 aa11□□□□□ -0.65
NPAS3-202ENST00000356141 LINC00476Q8WZB0 136 aa11□□□□□ -0.65
NPAS3-202ENST00000356141 WWC2-AS2Q96NR7 200 aa11□□□□□ -0.65
NPAS3-202ENST00000356141 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
NPAS3-202ENST00000356141 IGLV5-52A0A0A0MRZ9 124 aa10.99□□□□□ -0.65
NPAS3-202ENST00000356141 DNAH5Q8TE73 4624 aa10.99□□□□□ -0.65
NPAS3-202ENST00000356141 UBE2AP49459 152 aa10.99□□□□□ -0.65
NPAS3-202ENST00000356141 KRTAP10-2P60368 255 aa10.97□□□□□ -0.65
NPAS3-202ENST00000356141 UBL5Q9BZL1 73 aa10.97□□□□□ -0.65
NPAS3-202ENST00000356141 Q8N9L7 120 aa10.96□□□□□ -0.65
NPAS3-202ENST00000356141 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.66
NPAS3-202ENST00000356141 ATP5EP2Q5VTU8 51 aa10.96□□□□□ -0.66
NPAS3-202ENST00000356141 Q6ZVQ6 151 aa10.94□□□□□ -0.66
NPAS3-202ENST00000356141 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
NPAS3-202ENST00000356141 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
NPAS3-202ENST00000356141 RYR3Q15413 4870 aa10.93□□□□□ -0.66
NPAS3-202ENST00000356141 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
NPAS3-202ENST00000356141 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
NPAS3-202ENST00000356141 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
NPAS3-202ENST00000356141 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
NPAS3-202ENST00000356141 DEFB116Q30KQ4 102 aa10.9□□□□□ -0.66
NPAS3-202ENST00000356141 FAT2Q9NYQ8 4349 aa10.9□□□□□ -0.67
NPAS3-202ENST00000356141 SACSQ9NZJ4 4579 aa10.9□□□□□ -0.67
NPAS3-202ENST00000356141 SMIM29Q86T20 159 aa10.89□□□□□ -0.67
NPAS3-202ENST00000356141 A0A1W2PNM2 257 aa10.88□□□□□ -0.67
NPAS3-202ENST00000356141 NDUFC1O43677 76 aa10.87□□□□□ -0.67
NPAS3-202ENST00000356141 ATP5EP56381 51 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-202ENST00000356141 PSORS1C2Q9UIG4 136 aa10.85□□□□□ -0.67
NPAS3-202ENST00000356141 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
NPAS3-202ENST00000356141 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
NPAS3-202ENST00000356141 PKD1P98161 4303 aa10.84□□□□□ -0.67
NPAS3-202ENST00000356141 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
NPAS3-202ENST00000356141 NREPQ16612 68 aa10.83□□□□□ -0.68
NPAS3-202ENST00000356141 H3BQ85 93 aa10.82□□□□□ -0.68
NPAS3-202ENST00000356141 BPY2O14599 106 aa10.82□□□□□ -0.68
NPAS3-202ENST00000356141 BCE1O60756 84 aa10.81□□□□□ -0.68
NPAS3-202ENST00000356141 IGFL1Q6UW32 110 aa10.81□□□□□ -0.68
NPAS3-202ENST00000356141 PDE6GP18545 87 aa10.81□□□□□ -0.68
NPAS3-202ENST00000356141 PSPHP1O15172 72 aa10.8□□□□□ -0.68
NPAS3-202ENST00000356141 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
NPAS3-202ENST00000356141 ALMS1Q8TCU4 4167 aa10.79□□□□□ -0.68
NPAS3-202ENST00000356141 A8MU10 97 aa10.78□□□□□ -0.68
NPAS3-202ENST00000356141 CIRBP-AS1Q8TBR5 109 aa10.78□□□□□ -0.68
NPAS3-202ENST00000356141 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.69
NPAS3-202ENST00000356141 A0A087WSZ3 146 aa10.76□□□□□ -0.69
NPAS3-202ENST00000356141 KRTAP10-1P60331 282 aa10.76□□□□□ -0.69
NPAS3-202ENST00000356141 Q8NBF4 154 aa10.75□□□□□ -0.69
NPAS3-202ENST00000356141 PLAC8Q9NZF1 115 aa10.72□□□□□ -0.69
NPAS3-202ENST00000356141 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
NPAS3-202ENST00000356141 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.7
NPAS3-202ENST00000356141 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
NPAS3-202ENST00000356141 A8MUN3 132 aa10.68□□□□□ -0.7
NPAS3-202ENST00000356141 MOBPQ13875 183 aa10.66□□□□□ -0.7
NPAS3-202ENST00000356141 RYR2Q92736 4967 aa10.66□□□□□ -0.7
NPAS3-202ENST00000356141 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
NPAS3-202ENST00000356141 H0Y9J4 135 aa10.65□□□□□ -0.71
NPAS3-202ENST00000356141 K7EQZ3 153 aa10.64□□□□□ -0.71
NPAS3-202ENST00000356141 IGKV4-1P06312 121 aa10.63□□□□□ -0.71
NPAS3-202ENST00000356141 CXCL6P80162 114 aa10.63□□□□□ -0.71
NPAS3-202ENST00000356141 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
NPAS3-202ENST00000356141 ZNF861PO60384 105 aa10.63□□□□□ -0.71
NPAS3-202ENST00000356141 Q1T7F1 81 aa10.62□□□□□ -0.71
NPAS3-202ENST00000356141 TRAV22A0A0B4J277 110 aa10.61□□□□□ -0.71
NPAS3-202ENST00000356141 hDV103S1A0JD37 113 aa10.61□□□□□ -0.71
NPAS3-202ENST00000356141 SMR3BP02814 79 aaPredicted RBP10.61□□□□□ -0.71
NPAS3-202ENST00000356141 FAT1Q14517 4588 aa10.6□□□□□ -0.71
NPAS3-202ENST00000356141 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
NPAS3-202ENST00000356141 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
NPAS3-202ENST00000356141 C1orf64Q8NEQ6 169 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms