RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PRYO14603 147 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 SPRR1AP35321 89 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 C1orf137Q5JT78 98 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 Q6ZR54 194 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 LINC00336Q6ZUF6 198 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 DNAH17Q9UFH2 4485 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 ALMS1Q8TCU4 4167 aa5.45□□□□□ -1.54
TRIM55-204ENST00000353317 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 LY6G6CO95867 125 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
TRIM55-204ENST00000353317 A0A1B0GW54 56 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 FAM229BQ4G0N7 80 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 Q8NBF4 154 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 FAM30AQ9NZY2 134 aa5.44□□□□□ -1.54
TRIM55-204ENST00000353317 PSCAO43653 123 aa5.43□□□□□ -1.54
TRIM55-204ENST00000353317 SPRR4Q96PI1 79 aa5.43□□□□□ -1.54
TRIM55-204ENST00000353317 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
TRIM55-204ENST00000353317 DSCR10P59022 87 aa5.42□□□□□ -1.54
TRIM55-204ENST00000353317 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
TRIM55-204ENST00000353317 FAT2Q9NYQ8 4349 aa5.41□□□□□ -1.54
TRIM55-204ENST00000353317 DNAH11Q96DT5 4516 aa5.41□□□□□ -1.54
TRIM55-204ENST00000353317 K7EQZ3 153 aa5.41□□□□□ -1.54
TRIM55-204ENST00000353317 UBE2BP63146 152 aa5.41□□□□□ -1.54
TRIM55-204ENST00000353317 LCE6AA0A183 80 aa5.4□□□□□ -1.54
TRIM55-204ENST00000353317 A0A0G2JQZ4 141 aa5.4□□□□□ -1.55
TRIM55-204ENST00000353317 A0A1W2PNN7 141 aa5.4□□□□□ -1.55
TRIM55-204ENST00000353317 PRO0628Q9UI54 55 aa5.4□□□□□ -1.55
TRIM55-204ENST00000353317 KMT2CQ8NEZ4 4911 aaKnown RBP5.39□□□□□ -1.55
TRIM55-204ENST00000353317 PKD1P98161 4303 aa5.39□□□□□ -1.55
TRIM55-204ENST00000353317 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
TRIM55-204ENST00000353317 MPLKIPQ8TAP9 179 aa5.39□□□□□ -1.55
TRIM55-204ENST00000353317 DNAH5Q8TE73 4624 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 A0A096LNI7 61 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 PANO1I0J062 215 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 A0A087WTM6 91 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 REG3GQ6UW15 175 aa5.38□□□□□ -1.55
TRIM55-204ENST00000353317 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
TRIM55-204ENST00000353317 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
TRIM55-204ENST00000353317 ZCCHC13Q8WW36 166 aaKnown RBP5.36□□□□□ -1.55
TRIM55-204ENST00000353317 RTL8CO15255 209 aa5.36□□□□□ -1.55
TRIM55-204ENST00000353317 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
TRIM55-204ENST00000353317 C1orf134Q5TEV5 83 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 IGFL1Q6UW32 110 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 C9orf163Q8N9P6 203 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 DNAH8Q96JB1 4490 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 HCG22E2RYF7 251 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 PRLHP81277 87 aa5.35□□□□□ -1.55
TRIM55-204ENST00000353317 hDV103S1A0JD37 113 aa5.34□□□□□ -1.55
TRIM55-204ENST00000353317 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
TRIM55-204ENST00000353317 PKHD1P08F94 4074 aa5.34□□□□□ -1.56
TRIM55-204ENST00000353317 C16orf90A8MZG2 172 aa5.33□□□□□ -1.56
TRIM55-204ENST00000353317 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
TRIM55-204ENST00000353317 RYR2Q92736 4967 aa5.33□□□□□ -1.56
TRIM55-204ENST00000353317 C14orf177Q52M58 125 aa5.33□□□□□ -1.56
TRIM55-204ENST00000353317 C1orf64Q8NEQ6 169 aa5.33□□□□□ -1.56
TRIM55-204ENST00000353317 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
TRIM55-204ENST00000353317 A0A087WSZ3 146 aa5.32□□□□□ -1.56
TRIM55-204ENST00000353317 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
TRIM55-204ENST00000353317 WFDC13Q8IUB5 93 aa5.31□□□□□ -1.56
TRIM55-204ENST00000353317 IGLV8-61A0A075B6I0 122 aa5.3□□□□□ -1.56
TRIM55-204ENST00000353317 RPL37AP61513 92 aaKnown RBP5.3□□□□□ -1.56
TRIM55-204ENST00000353317 PRR4Q16378 134 aa5.3□□□□□ -1.56
TRIM55-204ENST00000353317 PHF5AQ7RTV0 110 aaKnown RBP5.29□□□□□ -1.56
TRIM55-204ENST00000353317 PKIGQ9Y2B9 76 aa5.29□□□□□ -1.56
TRIM55-204ENST00000353317 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
TRIM55-204ENST00000353317 UBE2AP49459 152 aa5.27□□□□□ -1.57
TRIM55-204ENST00000353317 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
TRIM55-204ENST00000353317 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
TRIM55-204ENST00000353317 RYR3Q15413 4870 aa5.27□□□□□ -1.57
TRIM55-204ENST00000353317 Q1T7F1 81 aa5.27□□□□□ -1.57
TRIM55-204ENST00000353317 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 NDUFB1O75438 58 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 TRAV22A0A0B4J277 110 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 MP68P56378 58 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 LINC00208Q96KT6 92 aa5.26□□□□□ -1.57
TRIM55-204ENST00000353317 PRR15Q8IV56 129 aa5.25□□□□□ -1.57
TRIM55-204ENST00000353317 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
TRIM55-204ENST00000353317 LINC00472Q9H8W2 130 aa5.24□□□□□ -1.57
TRIM55-204ENST00000353317 SPRR1BP22528 89 aa5.24□□□□□ -1.57
TRIM55-204ENST00000353317 PSPHP1O15172 72 aa5.23□□□□□ -1.57
TRIM55-204ENST00000353317 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
TRIM55-204ENST00000353317 A8MWP4 228 aa5.23□□□□□ -1.57
TRIM55-204ENST00000353317 H0Y9J4 135 aa5.23□□□□□ -1.57
TRIM55-204ENST00000353317 H0Y9P7 68 aa5.23□□□□□ -1.57
TRIM55-204ENST00000353317 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
TRIM55-204ENST00000353317 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
TRIM55-204ENST00000353317 VPS13BQ7Z7G8 4022 aa5.2□□□□□ -1.58
TRIM55-204ENST00000353317 C1orf195Q5TG92 126 aa5.19□□□□□ -1.58
TRIM55-204ENST00000353317 SPANXA2-OT1Q8N9U9 137 aa5.19□□□□□ -1.58
TRIM55-204ENST00000353317 CIRBP-AS1Q8TBR5 109 aa5.19□□□□□ -1.58
TRIM55-204ENST00000353317 H3BPC8 53 aa5.19□□□□□ -1.58
TRIM55-204ENST00000353317 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
TRIM55-204ENST00000353317 A0A1B0GVY2 172 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms