RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 Q6ZRX8 168 aa10.12□□□□□ -0.79
USH1C-202ENST00000318024 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
USH1C-202ENST00000318024 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
USH1C-202ENST00000318024 SPRR4Q96PI1 79 aa10.11□□□□□ -0.79
USH1C-202ENST00000318024 TLX1NBP0CAT3 122 aa10.11□□□□□ -0.79
USH1C-202ENST00000318024 CD164Q04900 197 aa10.11□□□□□ -0.79
USH1C-202ENST00000318024 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
USH1C-202ENST00000318024 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
USH1C-202ENST00000318024 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
USH1C-202ENST00000318024 Q8NBF4 154 aa10.1□□□□□ -0.79
USH1C-202ENST00000318024 FAM30AQ9NZY2 134 aa10.1□□□□□ -0.79
USH1C-202ENST00000318024 DSCR10P59022 87 aa10.1□□□□□ -0.79
USH1C-202ENST00000318024 IGLV5-37A0A075B6J1 123 aa10.09□□□□□ -0.79
USH1C-202ENST00000318024 LY6G6CO95867 125 aa10.09□□□□□ -0.79
USH1C-202ENST00000318024 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
USH1C-202ENST00000318024 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
USH1C-202ENST00000318024 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
USH1C-202ENST00000318024 MPLKIPQ8TAP9 179 aa10.08□□□□□ -0.8
USH1C-202ENST00000318024 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
USH1C-202ENST00000318024 hDV103S1A0JD37 113 aa10.07□□□□□ -0.8
USH1C-202ENST00000318024 ST20-AS1Q8NBB2 130 aa10.06□□□□□ -0.8
USH1C-202ENST00000318024 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
USH1C-202ENST00000318024 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
USH1C-202ENST00000318024 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
USH1C-202ENST00000318024 PRR15Q8IV56 129 aa10.03□□□□□ -0.8
USH1C-202ENST00000318024 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
USH1C-202ENST00000318024 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
USH1C-202ENST00000318024 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
USH1C-202ENST00000318024 K7EQZ3 153 aa10.02□□□□□ -0.81
USH1C-202ENST00000318024 Q6ZR54 194 aa10.01□□□□□ -0.81
USH1C-202ENST00000318024 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
USH1C-202ENST00000318024 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
USH1C-202ENST00000318024 Q1T7F1 81 aa9.98□□□□□ -0.81
USH1C-202ENST00000318024 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
USH1C-202ENST00000318024 CYP4F30PQ9H0H9 118 aa9.98□□□□□ -0.81
USH1C-202ENST00000318024 IGKV2-24A0A0C4DH68 120 aa9.97□□□□□ -0.81
USH1C-202ENST00000318024 C14orf177Q52M58 125 aa9.97□□□□□ -0.81
USH1C-202ENST00000318024 HECTD4Q9Y4D8 3996 aa9.95□□□□□ -0.82
USH1C-202ENST00000318024 A0A096LNI7 61 aa9.95□□□□□ -0.82
USH1C-202ENST00000318024 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
USH1C-202ENST00000318024 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
USH1C-202ENST00000318024 A0A087WTM6 91 aa9.94□□□□□ -0.82
USH1C-202ENST00000318024 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
USH1C-202ENST00000318024 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
USH1C-202ENST00000318024 ALMS1Q8TCU4 4167 aa9.92□□□□□ -0.82
USH1C-202ENST00000318024 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
USH1C-202ENST00000318024 DNAH17Q9UFH2 4485 aa9.91□□□□□ -0.82
USH1C-202ENST00000318024 IGFL1Q6UW32 110 aa9.91□□□□□ -0.82
USH1C-202ENST00000318024 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
USH1C-202ENST00000318024 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
USH1C-202ENST00000318024 IGLV8-61A0A075B6I0 122 aa9.9□□□□□ -0.83
USH1C-202ENST00000318024 A0A0G2JQZ4 141 aa9.9□□□□□ -0.83
USH1C-202ENST00000318024 A0A1W2PNN7 141 aa9.9□□□□□ -0.83
USH1C-202ENST00000318024 C16orf90A8MZG2 172 aa9.9□□□□□ -0.83
USH1C-202ENST00000318024 UBE2BP63146 152 aa9.9□□□□□ -0.83
USH1C-202ENST00000318024 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
USH1C-202ENST00000318024 REG3GQ6UW15 175 aa9.88□□□□□ -0.83
USH1C-202ENST00000318024 SACSQ9NZJ4 4579 aa9.87□□□□□ -0.83
USH1C-202ENST00000318024 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
USH1C-202ENST00000318024 PANO1I0J062 215 aa9.86□□□□□ -0.83
USH1C-202ENST00000318024 TRAV22A0A0B4J277 110 aa9.85□□□□□ -0.83
USH1C-202ENST00000318024 NDUFB1O75438 58 aa9.84□□□□□ -0.83
USH1C-202ENST00000318024 RTL8CO15255 209 aa9.83□□□□□ -0.84
USH1C-202ENST00000318024 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
USH1C-202ENST00000318024 PRR4Q16378 134 aa9.83□□□□□ -0.84
USH1C-202ENST00000318024 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
USH1C-202ENST00000318024 DNAH11Q96DT5 4516 aa9.81□□□□□ -0.84
USH1C-202ENST00000318024 A0A087WSZ3 146 aa9.81□□□□□ -0.84
USH1C-202ENST00000318024 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
USH1C-202ENST00000318024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
USH1C-202ENST00000318024 IGLV5-52A0A0A0MRZ9 124 aa9.79□□□□□ -0.84
USH1C-202ENST00000318024 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
USH1C-202ENST00000318024 PSPHP1O15172 72 aa9.79□□□□□ -0.84
USH1C-202ENST00000318024 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
USH1C-202ENST00000318024 MP68P56378 58 aa9.78□□□□□ -0.84
USH1C-202ENST00000318024 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
USH1C-202ENST00000318024 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
USH1C-202ENST00000318024 PRLHP81277 87 aa9.78□□□□□ -0.84
USH1C-202ENST00000318024 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
USH1C-202ENST00000318024 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
USH1C-202ENST00000318024 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
USH1C-202ENST00000318024 H3BPC8 53 aa9.75□□□□□ -0.85
USH1C-202ENST00000318024 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
USH1C-202ENST00000318024 SPACA4Q8TDM5 124 aa9.74□□□□□ -0.85
USH1C-202ENST00000318024 A8MUN3 132 aa9.74□□□□□ -0.85
USH1C-202ENST00000318024 SPRR1BP22528 89 aa9.74□□□□□ -0.85
USH1C-202ENST00000318024 LINC00472Q9H8W2 130 aa9.74□□□□□ -0.85
USH1C-202ENST00000318024 PKD1P98161 4303 aa9.73□□□□□ -0.85
USH1C-202ENST00000318024 Q5VV11 94 aa9.73□□□□□ -0.85
USH1C-202ENST00000318024 RBM12B-AS1Q9P1G2 102 aa9.73□□□□□ -0.85
USH1C-202ENST00000318024 H0Y9P7 68 aa9.72□□□□□ -0.85
USH1C-202ENST00000318024 DNAH8Q96JB1 4490 aa9.72□□□□□ -0.85
USH1C-202ENST00000318024 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
USH1C-202ENST00000318024 A8MWP4 228 aa9.7□□□□□ -0.86
USH1C-202ENST00000318024 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
USH1C-202ENST00000318024 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
USH1C-202ENST00000318024 UBE2AP49459 152 aa9.69□□□□□ -0.86
USH1C-202ENST00000318024 RYR2Q92736 4967 aa9.68□□□□□ -0.86
USH1C-202ENST00000318024 A8MU10 97 aa9.67□□□□□ -0.86
USH1C-202ENST00000318024 H0Y9J4 135 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms