RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 KRTAP10-11P60412 298 aa4.96□□□□□ -1.62
CDHR3-201ENST00000317716 A0A1W2PNM2 257 aa4.95□□□□□ -1.62
CDHR3-201ENST00000317716 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
CDHR3-201ENST00000317716 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
CDHR3-201ENST00000317716 F8WDY8 70 aa4.94□□□□□ -1.62
CDHR3-201ENST00000317716 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
CDHR3-201ENST00000317716 Q6ZRX8 168 aa4.94□□□□□ -1.62
CDHR3-201ENST00000317716 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
CDHR3-201ENST00000317716 Q8NAQ8 132 aa4.92□□□□□ -1.62
CDHR3-201ENST00000317716 CHTF8P0CG12 524 aa4.91□□□□□ -1.62
CDHR3-201ENST00000317716 C15orf56Q8N910 161 aa4.91□□□□□ -1.62
CDHR3-201ENST00000317716 LIMD2Q9BT23 127 aa4.9□□□□□ -1.62
CDHR3-201ENST00000317716 CASC10Q5T4H9 136 aa4.9□□□□□ -1.63
CDHR3-201ENST00000317716 K7EIL1 84 aa4.9□□□□□ -1.63
CDHR3-201ENST00000317716 LINC00612Q8N6U2 182 aa4.89□□□□□ -1.63
CDHR3-201ENST00000317716 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
CDHR3-201ENST00000317716 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CDHR3-201ENST00000317716 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
CDHR3-201ENST00000317716 PHF5AQ7RTV0 110 aaKnown RBP4.88□□□□□ -1.63
CDHR3-201ENST00000317716 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
CDHR3-201ENST00000317716 A8MU10 97 aa4.88□□□□□ -1.63
CDHR3-201ENST00000317716 SPINK1P00995 79 aa4.88□□□□□ -1.63
CDHR3-201ENST00000317716 PRR34Q9NV39 138 aa4.88□□□□□ -1.63
CDHR3-201ENST00000317716 DSCR10P59022 87 aa4.87□□□□□ -1.63
CDHR3-201ENST00000317716 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
CDHR3-201ENST00000317716 IGLV1-50A0A075B6I6 118 aa4.85□□□□□ -1.63
CDHR3-201ENST00000317716 LINC01556Q5JQF7 62 aa4.85□□□□□ -1.63
CDHR3-201ENST00000317716 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
CDHR3-201ENST00000317716 DNHD1Q96M86 4753 aa4.84□□□□□ -1.63
CDHR3-201ENST00000317716 CD164Q04900 197 aa4.84□□□□□ -1.63
CDHR3-201ENST00000317716 PRR15Q8IV56 129 aa4.84□□□□□ -1.63
CDHR3-201ENST00000317716 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
CDHR3-201ENST00000317716 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 LY6G6CO95867 125 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 Q1T7F1 81 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 LINC00588Q9Y4M8 146 aa4.82□□□□□ -1.64
CDHR3-201ENST00000317716 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
CDHR3-201ENST00000317716 MOBPQ13875 183 aa4.81□□□□□ -1.64
CDHR3-201ENST00000317716 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
CDHR3-201ENST00000317716 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
CDHR3-201ENST00000317716 FBN3Q75N90 2809 aa4.8□□□□□ -1.64
CDHR3-201ENST00000317716 C16orf90A8MZG2 172 aa4.8□□□□□ -1.64
CDHR3-201ENST00000317716 Q5VV11 94 aa4.8□□□□□ -1.64
CDHR3-201ENST00000317716 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
CDHR3-201ENST00000317716 A8MWP4 228 aa4.79□□□□□ -1.64
CDHR3-201ENST00000317716 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
CDHR3-201ENST00000317716 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
CDHR3-201ENST00000317716 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
CDHR3-201ENST00000317716 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
CDHR3-201ENST00000317716 A0A1B0GU69 56 aa4.78□□□□□ -1.64
CDHR3-201ENST00000317716 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
CDHR3-201ENST00000317716 A0A1B0GW54 56 aa4.76□□□□□ -1.65
CDHR3-201ENST00000317716 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
CDHR3-201ENST00000317716 CYP4F30PQ9H0H9 118 aa4.75□□□□□ -1.65
CDHR3-201ENST00000317716 C7orf65Q6ZTY9 151 aa4.75□□□□□ -1.65
CDHR3-201ENST00000317716 COL7A1Q02388 2944 aa4.74□□□□□ -1.65
CDHR3-201ENST00000317716 SPRR4Q96PI1 79 aa4.74□□□□□ -1.65
CDHR3-201ENST00000317716 SPINK7P58062 85 aa4.74□□□□□ -1.65
CDHR3-201ENST00000317716 H3BPC8 53 aa4.73□□□□□ -1.65
CDHR3-201ENST00000317716 CNBPP62633 177 aaKnown RBP4.73□□□□□ -1.65
CDHR3-201ENST00000317716 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
CDHR3-201ENST00000317716 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
CDHR3-201ENST00000317716 C4orf48Q5BLP8 95 aa4.72□□□□□ -1.65
CDHR3-201ENST00000317716 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
CDHR3-201ENST00000317716 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
CDHR3-201ENST00000317716 ACYP2P14621 99 aa4.71□□□□□ -1.66
CDHR3-201ENST00000317716 LCA10Q71F78 164 aa4.71□□□□□ -1.66
CDHR3-201ENST00000317716 MRPL34Q9BQ48 92 aaKnown RBP4.71□□□□□ -1.66
CDHR3-201ENST00000317716 H3BNG1 76 aa4.7□□□□□ -1.66
CDHR3-201ENST00000317716 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
CDHR3-201ENST00000317716 ZNF706Q9Y5V0 76 aaPredicted RBP4.69□□□□□ -1.66
CDHR3-201ENST00000317716 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
CDHR3-201ENST00000317716 SPACA4Q8TDM5 124 aa4.69□□□□□ -1.66
CDHR3-201ENST00000317716 KRTAP26-1Q6PEX3 210 aa4.68□□□□□ -1.66
CDHR3-201ENST00000317716 ZCCHC13Q8WW36 166 aaKnown RBP4.68□□□□□ -1.66
CDHR3-201ENST00000317716 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
CDHR3-201ENST00000317716 Q75L30 129 aa4.67□□□□□ -1.66
CDHR3-201ENST00000317716 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
CDHR3-201ENST00000317716 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
CDHR3-201ENST00000317716 LINC00313P59037 77 aa4.67□□□□□ -1.66
CDHR3-201ENST00000317716 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 RTL8CO15255 209 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 TNP2Q05952 138 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 IGLV7-46A0A075B6I9 117 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 HRES1P13985 223 aa4.66□□□□□ -1.66
CDHR3-201ENST00000317716 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
CDHR3-201ENST00000317716 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
CDHR3-201ENST00000317716 ANK2Q01484 3957 aa4.65□□□□□ -1.67
CDHR3-201ENST00000317716 SPRR1AP35321 89 aa4.65□□□□□ -1.67
CDHR3-201ENST00000317716 PLA2G2DQ9UNK4 145 aa4.65□□□□□ -1.67
CDHR3-201ENST00000317716 H3BS24 57 aa4.64□□□□□ -1.67
CDHR3-201ENST00000317716 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
CDHR3-201ENST00000317716 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
CDHR3-201ENST00000317716 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
CDHR3-201ENST00000317716 UQCR11O14957 56 aa4.63□□□□□ -1.67
CDHR3-201ENST00000317716 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms