RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MRPL55Q7Z7F7 128 aaKnown RBP4.83□□□□□ -1.64
TRIM55-202ENST00000315962 PDE6GP18545 87 aa4.82□□□□□ -1.64
TRIM55-202ENST00000315962 PRLHP81277 87 aa4.82□□□□□ -1.64
TRIM55-202ENST00000315962 KRTAP11-1Q8IUC1 163 aa4.82□□□□□ -1.64
TRIM55-202ENST00000315962 ERC2-IT1O76042 136 aa4.82□□□□□ -1.64
TRIM55-202ENST00000315962 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
TRIM55-202ENST00000315962 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
TRIM55-202ENST00000315962 PRYO14603 147 aa4.81□□□□□ -1.64
TRIM55-202ENST00000315962 Q9BRP9 147 aa4.81□□□□□ -1.64
TRIM55-202ENST00000315962 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
TRIM55-202ENST00000315962 A0A1W2PNM2 257 aa4.8□□□□□ -1.64
TRIM55-202ENST00000315962 UBE2BP63146 152 aa4.8□□□□□ -1.64
TRIM55-202ENST00000315962 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
TRIM55-202ENST00000315962 Q6ZRN7 208 aaPredicted RBP4.8□□□□□ -1.64
TRIM55-202ENST00000315962 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 K7EQZ3 153 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 C16orf90A8MZG2 172 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 C1orf137Q5JT78 98 aa4.79□□□□□ -1.64
TRIM55-202ENST00000315962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.79□□□□□ -1.64
TRIM55-202ENST00000315962 DNAH2Q9P225 4427 aa4.78□□□□□ -1.64
TRIM55-202ENST00000315962 KRTAP21-3Q3LHN1 58 aa4.78□□□□□ -1.64
TRIM55-202ENST00000315962 WFDC13Q8IUB5 93 aa4.78□□□□□ -1.64
TRIM55-202ENST00000315962 CNBPP62633 177 aaKnown RBP4.77□□□□□ -1.65
TRIM55-202ENST00000315962 Q6ZRX8 168 aa4.77□□□□□ -1.65
TRIM55-202ENST00000315962 FRAS1Q86XX4 4008 aa4.77□□□□□ -1.65
TRIM55-202ENST00000315962 A0A087WTM6 91 aa4.76□□□□□ -1.65
TRIM55-202ENST00000315962 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
TRIM55-202ENST00000315962 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
TRIM55-202ENST00000315962 C9orf163Q8N9P6 203 aa4.76□□□□□ -1.65
TRIM55-202ENST00000315962 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
TRIM55-202ENST00000315962 HYDINQ4G0P3 5121 aa4.76□□□□□ -1.65
TRIM55-202ENST00000315962 KRTAP4-16G5E9R7 235 aaPredicted RBP4.75□□□□□ -1.65
TRIM55-202ENST00000315962 PSPHP1O15172 72 aa4.75□□□□□ -1.65
TRIM55-202ENST00000315962 BCE1O60756 84 aa4.75□□□□□ -1.65
TRIM55-202ENST00000315962 TNP2Q05952 138 aa4.75□□□□□ -1.65
TRIM55-202ENST00000315962 DSCR10P59022 87 aa4.75□□□□□ -1.65
TRIM55-202ENST00000315962 NDUFC1O43677 76 aa4.74□□□□□ -1.65
TRIM55-202ENST00000315962 C1orf134Q5TEV5 83 aa4.74□□□□□ -1.65
TRIM55-202ENST00000315962 DYNC2H1Q8NCM8 4307 aaKnown RBP4.74□□□□□ -1.65
TRIM55-202ENST00000315962 RTL8CO15255 209 aa4.74□□□□□ -1.65
TRIM55-202ENST00000315962 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 H3BQ85 93 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 Q6ZR54 194 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 Q8NBF4 154 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
TRIM55-202ENST00000315962 A0A087WSZ3 146 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 KRTAP10-2P60368 255 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 C1orf64Q8NEQ6 169 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 A8MU10 97 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 SPRR1AP35321 89 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
TRIM55-202ENST00000315962 WWC2-AS2Q96NR7 200 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 ANAPC11Q9NYG5 84 aa4.72□□□□□ -1.65
TRIM55-202ENST00000315962 IGLV5-37A0A075B6J1 123 aa4.71□□□□□ -1.66
TRIM55-202ENST00000315962 UBE2AP49459 152 aa4.71□□□□□ -1.66
TRIM55-202ENST00000315962 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
TRIM55-202ENST00000315962 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
TRIM55-202ENST00000315962 J3QL48 77 aa4.7□□□□□ -1.66
TRIM55-202ENST00000315962 IGFL1Q6UW32 110 aa4.69□□□□□ -1.66
TRIM55-202ENST00000315962 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
TRIM55-202ENST00000315962 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
TRIM55-202ENST00000315962 HCG22E2RYF7 251 aa4.68□□□□□ -1.66
TRIM55-202ENST00000315962 SPACA4Q8TDM5 124 aa4.68□□□□□ -1.66
TRIM55-202ENST00000315962 LINC00208Q96KT6 92 aa4.68□□□□□ -1.66
TRIM55-202ENST00000315962 PKHD1P08F94 4074 aa4.67□□□□□ -1.66
TRIM55-202ENST00000315962 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
TRIM55-202ENST00000315962 PSORS1C2Q9UIG4 136 aa4.66□□□□□ -1.66
TRIM55-202ENST00000315962 A8MUN3 132 aa4.66□□□□□ -1.66
TRIM55-202ENST00000315962 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
TRIM55-202ENST00000315962 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
TRIM55-202ENST00000315962 ZCCHC13Q8WW36 166 aaKnown RBP4.64□□□□□ -1.67
TRIM55-202ENST00000315962 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
TRIM55-202ENST00000315962 H3BS24 57 aa4.64□□□□□ -1.67
TRIM55-202ENST00000315962 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
TRIM55-202ENST00000315962 CIRBP-AS1Q8TBR5 109 aa4.64□□□□□ -1.67
TRIM55-202ENST00000315962 KMT2CQ8NEZ4 4911 aaKnown RBP4.63□□□□□ -1.67
TRIM55-202ENST00000315962 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
TRIM55-202ENST00000315962 H0Y9J4 135 aa4.62□□□□□ -1.67
TRIM55-202ENST00000315962 KRTAP10-1P60331 282 aa4.62□□□□□ -1.67
TRIM55-202ENST00000315962 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
TRIM55-202ENST00000315962 H0Y9P7 68 aa4.62□□□□□ -1.67
TRIM55-202ENST00000315962 LCE6AA0A183 80 aa4.61□□□□□ -1.67
TRIM55-202ENST00000315962 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
TRIM55-202ENST00000315962 MP68P56378 58 aa4.61□□□□□ -1.67
TRIM55-202ENST00000315962 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
TRIM55-202ENST00000315962 LRP1BQ9NZR2 4599 aa4.6□□□□□ -1.67
TRIM55-202ENST00000315962 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
TRIM55-202ENST00000315962 Q1T7F1 81 aa4.6□□□□□ -1.67
TRIM55-202ENST00000315962 PLAC8Q9NZF1 115 aa4.59□□□□□ -1.67
TRIM55-202ENST00000315962 C8orf87E5RJ46 101 aa4.59□□□□□ -1.68
TRIM55-202ENST00000315962 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.68
TRIM55-202ENST00000315962 SMR3BP02814 79 aaPredicted RBP4.58□□□□□ -1.68
TRIM55-202ENST00000315962 MOBPQ13875 183 aa4.57□□□□□ -1.68
TRIM55-202ENST00000315962 SPTSSBQ8NFR3 76 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms