RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
CHFR-202ENST00000315585 SPRR1BP22528 89 aa9.34□□□□□ -0.91
CHFR-202ENST00000315585 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
CHFR-202ENST00000315585 DSCR10P59022 87 aa9.32□□□□□ -0.92
CHFR-202ENST00000315585 WWC2-AS2Q96NR7 200 aa9.32□□□□□ -0.92
CHFR-202ENST00000315585 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CHFR-202ENST00000315585 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
CHFR-202ENST00000315585 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
CHFR-202ENST00000315585 Q6ZR54 194 aa9.31□□□□□ -0.92
CHFR-202ENST00000315585 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
CHFR-202ENST00000315585 MEGF8Q7Z7M0 2845 aa9.29□□□□□ -0.92
CHFR-202ENST00000315585 K7EQZ3 153 aa9.29□□□□□ -0.92
CHFR-202ENST00000315585 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
CHFR-202ENST00000315585 A0A087WSZ3 146 aa9.28□□□□□ -0.92
CHFR-202ENST00000315585 A0A087WTM6 91 aa9.27□□□□□ -0.92
CHFR-202ENST00000315585 C5orf47Q569G3 176 aa9.27□□□□□ -0.92
CHFR-202ENST00000315585 LCE6AA0A183 80 aa9.26□□□□□ -0.93
CHFR-202ENST00000315585 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
CHFR-202ENST00000315585 FAM30AQ9NZY2 134 aa9.26□□□□□ -0.93
CHFR-202ENST00000315585 LY6G6CO95867 125 aa9.26□□□□□ -0.93
CHFR-202ENST00000315585 OXTP01178 125 aa9.26□□□□□ -0.93
CHFR-202ENST00000315585 PRKDCP78527 4128 aaKnown RBP9.24□□□□□ -0.93
CHFR-202ENST00000315585 SMIM26A0A096LP01 95 aa9.24□□□□□ -0.93
CHFR-202ENST00000315585 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
CHFR-202ENST00000315585 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.94
CHFR-202ENST00000315585 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
CHFR-202ENST00000315585 DNAH7Q8WXX0 4024 aa9.2□□□□□ -0.94
CHFR-202ENST00000315585 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
CHFR-202ENST00000315585 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
CHFR-202ENST00000315585 KRTAP13-1Q8IUC0 172 aa9.19□□□□□ -0.94
CHFR-202ENST00000315585 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
CHFR-202ENST00000315585 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
CHFR-202ENST00000315585 RTL8CO15255 209 aa9.19□□□□□ -0.94
CHFR-202ENST00000315585 NDUFB1O75438 58 aa9.19□□□□□ -0.94
CHFR-202ENST00000315585 PLECQ15149 4684 aaKnown RBP9.18□□□□□ -0.94
CHFR-202ENST00000315585 Q5XG85 94 aa9.18□□□□□ -0.94
CHFR-202ENST00000315585 MP68P56378 58 aa9.17□□□□□ -0.94
CHFR-202ENST00000315585 A8MWP4 228 aa9.17□□□□□ -0.94
CHFR-202ENST00000315585 PRR15Q8IV56 129 aa9.16□□□□□ -0.94
CHFR-202ENST00000315585 LYSTQ99698 3801 aa9.16□□□□□ -0.94
CHFR-202ENST00000315585 TENM2Q9NT68 2774 aa9.16□□□□□ -0.94
CHFR-202ENST00000315585 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
CHFR-202ENST00000315585 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.94
CHFR-202ENST00000315585 IGLV5-52A0A0A0MRZ9 124 aa9.15□□□□□ -0.94
CHFR-202ENST00000315585 H3BPC8 53 aa9.14□□□□□ -0.95
CHFR-202ENST00000315585 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
CHFR-202ENST00000315585 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
CHFR-202ENST00000315585 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
CHFR-202ENST00000315585 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
CHFR-202ENST00000315585 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
CHFR-202ENST00000315585 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
CHFR-202ENST00000315585 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
CHFR-202ENST00000315585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
CHFR-202ENST00000315585 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
CHFR-202ENST00000315585 PANO1I0J062 215 aa9.12□□□□□ -0.95
CHFR-202ENST00000315585 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
CHFR-202ENST00000315585 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
CHFR-202ENST00000315585 HRCT1Q6UXD1 115 aa9.08□□□□□ -0.96
CHFR-202ENST00000315585 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
CHFR-202ENST00000315585 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
CHFR-202ENST00000315585 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
CHFR-202ENST00000315585 ZNF861PO60384 105 aa9.05□□□□□ -0.96
CHFR-202ENST00000315585 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
CHFR-202ENST00000315585 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
CHFR-202ENST00000315585 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
CHFR-202ENST00000315585 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
CHFR-202ENST00000315585 H0Y9P7 68 aa9.02□□□□□ -0.97
CHFR-202ENST00000315585 MOBPQ13875 183 aa9.02□□□□□ -0.97
CHFR-202ENST00000315585 LINC00208Q96KT6 92 aa9.02□□□□□ -0.97
CHFR-202ENST00000315585 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
CHFR-202ENST00000315585 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
CHFR-202ENST00000315585 SPANXA2-OT1Q8N9U9 137 aa9□□□□□ -0.97
CHFR-202ENST00000315585 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
CHFR-202ENST00000315585 C1orf64Q8NEQ6 169 aa8.98□□□□□ -0.97
CHFR-202ENST00000315585 Q96NJ1 140 aa8.96□□□□□ -0.97
CHFR-202ENST00000315585 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
CHFR-202ENST00000315585 DNAH6Q9C0G6 4158 aa8.95□□□□□ -0.98
CHFR-202ENST00000315585 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
CHFR-202ENST00000315585 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
CHFR-202ENST00000315585 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
CHFR-202ENST00000315585 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
CHFR-202ENST00000315585 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
CHFR-202ENST00000315585 TGP01266 2768 aa8.93□□□□□ -0.98
CHFR-202ENST00000315585 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
CHFR-202ENST00000315585 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
CHFR-202ENST00000315585 KMT2AQ03164 3969 aa8.92□□□□□ -0.98
CHFR-202ENST00000315585 CD164Q04900 197 aa8.91□□□□□ -0.98
CHFR-202ENST00000315585 V9GYY9 64 aa8.91□□□□□ -0.98
CHFR-202ENST00000315585 Q1T7F1 81 aa8.9□□□□□ -0.98
CHFR-202ENST00000315585 PRO0628Q9UI54 55 aa8.9□□□□□ -0.98
CHFR-202ENST00000315585 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.99
CHFR-202ENST00000315585 Q6ZSA8 131 aa8.89□□□□□ -0.99
CHFR-202ENST00000315585 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
CHFR-202ENST00000315585 LINC00336Q6ZUF6 198 aa8.89□□□□□ -0.99
CHFR-202ENST00000315585 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
CHFR-202ENST00000315585 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
CHFR-202ENST00000315585 DNAH17Q9UFH2 4485 aa8.87□□□□□ -0.99
CHFR-202ENST00000315585 SRRM2Q9UQ35 2752 aaKnown RBP8.87□□□□□ -0.99
CHFR-202ENST00000315585 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
CHFR-202ENST00000315585 PRR4Q16378 134 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms