RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 COX7BP24311 80 aa6.22□□□□□ -1.41
RBFOX1-201ENST00000311745 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.41
RBFOX1-201ENST00000311745 CHCHD10Q8WYQ3 142 aaPredicted RBP6.21□□□□□ -1.42
RBFOX1-201ENST00000311745 A0A0J9YWU9 116 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 LELP1Q5T871 98 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 F8P00451 2351 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 IGLV10-54A0A075B6I4 117 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 STAB1Q9NY15 2570 aa6.19□□□□□ -1.42
RBFOX1-201ENST00000311745 WFDC13Q8IUB5 93 aa6.18□□□□□ -1.42
RBFOX1-201ENST00000311745 H0Y9J4 135 aa6.17□□□□□ -1.42
RBFOX1-201ENST00000311745 COA5Q86WW8 74 aa6.17□□□□□ -1.42
RBFOX1-201ENST00000311745 DEFB105AQ8NG35 78 aa6.17□□□□□ -1.42
RBFOX1-201ENST00000311745 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
RBFOX1-201ENST00000311745 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
RBFOX1-201ENST00000311745 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
RBFOX1-201ENST00000311745 PRKDCP78527 4128 aaKnown RBP6.16□□□□□ -1.42
RBFOX1-201ENST00000311745 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
RBFOX1-201ENST00000311745 H3BNG1 76 aa6.15□□□□□ -1.42
RBFOX1-201ENST00000311745 PLECQ15149 4684 aaKnown RBP6.15□□□□□ -1.42
RBFOX1-201ENST00000311745 HTN3P15516 51 aa6.14□□□□□ -1.43
RBFOX1-201ENST00000311745 ELOF1P60002 83 aaKnown RBP6.14□□□□□ -1.43
RBFOX1-201ENST00000311745 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
RBFOX1-201ENST00000311745 COX17Q14061 63 aa6.14□□□□□ -1.43
RBFOX1-201ENST00000311745 LCE6AA0A183 80 aa6.13□□□□□ -1.43
RBFOX1-201ENST00000311745 K7EQZ3 153 aa6.13□□□□□ -1.43
RBFOX1-201ENST00000311745 KPRPQ5T749 579 aaPredicted RBP6.13□□□□□ -1.43
RBFOX1-201ENST00000311745 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
RBFOX1-201ENST00000311745 C15orf56Q8N910 161 aa6.12□□□□□ -1.43
RBFOX1-201ENST00000311745 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
RBFOX1-201ENST00000311745 NBEAL1Q6ZS30 2694 aa6.11□□□□□ -1.43
RBFOX1-201ENST00000311745 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
RBFOX1-201ENST00000311745 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
RBFOX1-201ENST00000311745 Q9BRP9 147 aa6.1□□□□□ -1.43
RBFOX1-201ENST00000311745 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
RBFOX1-201ENST00000311745 H0Y9P7 68 aa6.09□□□□□ -1.43
RBFOX1-201ENST00000311745 PCOTHQ58A44 107 aa6.09□□□□□ -1.43
RBFOX1-201ENST00000311745 H3BQ85 93 aa6.08□□□□□ -1.44
RBFOX1-201ENST00000311745 IGLV6-57P01721 117 aa6.08□□□□□ -1.44
RBFOX1-201ENST00000311745 VPS13DQ5THJ4 4388 aa6.08□□□□□ -1.44
RBFOX1-201ENST00000311745 A0A1W2PNM2 257 aa6.08□□□□□ -1.44
RBFOX1-201ENST00000311745 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
RBFOX1-201ENST00000311745 K7EIL1 84 aa6.07□□□□□ -1.44
RBFOX1-201ENST00000311745 Q6ZR54 194 aa6.07□□□□□ -1.44
RBFOX1-201ENST00000311745 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
RBFOX1-201ENST00000311745 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
RBFOX1-201ENST00000311745 LINC01556Q5JQF7 62 aa6.05□□□□□ -1.44
RBFOX1-201ENST00000311745 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
RBFOX1-201ENST00000311745 NOTCH1P46531 2555 aa6.05□□□□□ -1.44
RBFOX1-201ENST00000311745 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
RBFOX1-201ENST00000311745 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
RBFOX1-201ENST00000311745 DSCR10P59022 87 aa6.04□□□□□ -1.44
RBFOX1-201ENST00000311745 DEFB131BA0A096LNP1 70 aa6.04□□□□□ -1.44
RBFOX1-201ENST00000311745 CASC10Q5T4H9 136 aa6.04□□□□□ -1.44
RBFOX1-201ENST00000311745 DNAH10OSP0CZ25 163 aa6.03□□□□□ -1.44
RBFOX1-201ENST00000311745 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
RBFOX1-201ENST00000311745 KRTAP7-1Q8IUC3 87 aa6.03□□□□□ -1.44
RBFOX1-201ENST00000311745 COL6A5A8TX70 2615 aa6.02□□□□□ -1.45
RBFOX1-201ENST00000311745 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
RBFOX1-201ENST00000311745 DNHD1Q96M86 4753 aa6.01□□□□□ -1.45
RBFOX1-201ENST00000311745 ROMO1P60602 79 aa5.98□□□□□ -1.45
RBFOX1-201ENST00000311745 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
RBFOX1-201ENST00000311745 C1orf137Q5JT78 98 aa5.98□□□□□ -1.45
RBFOX1-201ENST00000311745 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
RBFOX1-201ENST00000311745 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 FBN3Q75N90 2809 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 RTL8CO15255 209 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
RBFOX1-201ENST00000311745 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.45
RBFOX1-201ENST00000311745 A0A0G2JQZ4 141 aa5.96□□□□□ -1.46
RBFOX1-201ENST00000311745 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
RBFOX1-201ENST00000311745 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
RBFOX1-201ENST00000311745 DNAH17Q9UFH2 4485 aa5.96□□□□□ -1.46
RBFOX1-201ENST00000311745 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
RBFOX1-201ENST00000311745 TLX1NBP0CAT3 122 aa5.95□□□□□ -1.46
RBFOX1-201ENST00000311745 C7orf33Q8WU49 177 aa5.95□□□□□ -1.46
RBFOX1-201ENST00000311745 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
RBFOX1-201ENST00000311745 KRTAP4-16G5E9R7 235 aaPredicted RBP5.94□□□□□ -1.46
RBFOX1-201ENST00000311745 REG3GQ6UW15 175 aa5.94□□□□□ -1.46
RBFOX1-201ENST00000311745 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
RBFOX1-201ENST00000311745 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
RBFOX1-201ENST00000311745 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
RBFOX1-201ENST00000311745 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
RBFOX1-201ENST00000311745 C9orf163Q8N9P6 203 aa5.93□□□□□ -1.46
RBFOX1-201ENST00000311745 Q8N377 158 aa5.92□□□□□ -1.46
RBFOX1-201ENST00000311745 TENM2Q9NT68 2774 aa5.92□□□□□ -1.46
RBFOX1-201ENST00000311745 Q8NBF4 154 aa5.91□□□□□ -1.46
RBFOX1-201ENST00000311745 STAB2Q8WWQ8 2551 aa5.91□□□□□ -1.46
RBFOX1-201ENST00000311745 IGLV5-37A0A075B6J1 123 aa5.91□□□□□ -1.46
RBFOX1-201ENST00000311745 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
RBFOX1-201ENST00000311745 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.46
RBFOX1-201ENST00000311745 HRES1P13985 223 aa5.9□□□□□ -1.46
RBFOX1-201ENST00000311745 H3BPC8 53 aa5.89□□□□□ -1.47
RBFOX1-201ENST00000311745 APLNQ9ULZ1 77 aa5.89□□□□□ -1.47
RBFOX1-201ENST00000311745 SPRR1AP35321 89 aa5.89□□□□□ -1.47
RBFOX1-201ENST00000311745 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
RBFOX1-201ENST00000311745 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
RBFOX1-201ENST00000311745 ASB16-AS1Q495Z4 193 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms