RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
LRFN4-201ENST00000309602 KLKP1Q107X0 134 aa12.37□□□□□ -0.43
LRFN4-201ENST00000309602 SNURFQ9Y675 71 aa12.37□□□□□ -0.43
LRFN4-201ENST00000309602 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
LRFN4-201ENST00000309602 IGFL1Q6UW32 110 aa12.36□□□□□ -0.43
LRFN4-201ENST00000309602 H7BZZ5 65 aa12.35□□□□□ -0.43
LRFN4-201ENST00000309602 LINC00336Q6ZUF6 198 aa12.33□□□□□ -0.43
LRFN4-201ENST00000309602 EPM2AB3EWF7 344 aa12.32□□□□□ -0.44
LRFN4-201ENST00000309602 PANO1I0J062 215 aa12.31□□□□□ -0.44
LRFN4-201ENST00000309602 OCR1Q9BZK8 76 aa12.31□□□□□ -0.44
LRFN4-201ENST00000309602 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
LRFN4-201ENST00000309602 DSCR10P59022 87 aa12.3□□□□□ -0.44
LRFN4-201ENST00000309602 PRO0628Q9UI54 55 aa12.3□□□□□ -0.44
LRFN4-201ENST00000309602 H0Y9J4 135 aa12.29□□□□□ -0.44
LRFN4-201ENST00000309602 UBE2AP49459 152 aa12.29□□□□□ -0.44
LRFN4-201ENST00000309602 TGP01266 2768 aa12.28□□□□□ -0.44
LRFN4-201ENST00000309602 STARD9Q9P2P6 4700 aa12.27□□□□□ -0.44
LRFN4-201ENST00000309602 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.44
LRFN4-201ENST00000309602 FAM236CP0DP71 79 aa12.27□□□□□ -0.44
LRFN4-201ENST00000309602 PKIGQ9Y2B9 76 aa12.27□□□□□ -0.45
LRFN4-201ENST00000309602 VPS13DQ5THJ4 4388 aa12.27□□□□□ -0.45
LRFN4-201ENST00000309602 K7EQZ3 153 aa12.26□□□□□ -0.45
LRFN4-201ENST00000309602 TMEM254Q8TBM7 123 aa12.26□□□□□ -0.45
LRFN4-201ENST00000309602 LINC00474Q9P2X8 69 aa12.26□□□□□ -0.45
LRFN4-201ENST00000309602 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
LRFN4-201ENST00000309602 SRRM2Q9UQ35 2752 aaKnown RBP12.25□□□□□ -0.45
LRFN4-201ENST00000309602 KRTAP21-3Q3LHN1 58 aa12.25□□□□□ -0.45
LRFN4-201ENST00000309602 SPRR1BP22528 89 aa12.24□□□□□ -0.45
LRFN4-201ENST00000309602 A0A087WSZ3 146 aa12.23□□□□□ -0.45
LRFN4-201ENST00000309602 SERP1Q9Y6X1 66 aa12.21□□□□□ -0.45
LRFN4-201ENST00000309602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.21□□□□□ -0.45
LRFN4-201ENST00000309602 DEFB116Q30KQ4 102 aa12.21□□□□□ -0.46
LRFN4-201ENST00000309602 FAM30AQ9NZY2 134 aa12.2□□□□□ -0.46
LRFN4-201ENST00000309602 NDUFC1O43677 76 aa12.19□□□□□ -0.46
LRFN4-201ENST00000309602 KRTAP13-1Q8IUC0 172 aa12.19□□□□□ -0.46
LRFN4-201ENST00000309602 SPACA4Q8TDM5 124 aa12.19□□□□□ -0.46
LRFN4-201ENST00000309602 FP248Q71RG6 208 aaPredicted RBP12.18□□□□□ -0.46
LRFN4-201ENST00000309602 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
LRFN4-201ENST00000309602 A0A087WTM6 91 aa12.17□□□□□ -0.46
LRFN4-201ENST00000309602 HCG22E2RYF7 251 aa12.13□□□□□ -0.47
LRFN4-201ENST00000309602 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
LRFN4-201ENST00000309602 LCE6AA0A183 80 aa12.1□□□□□ -0.47
LRFN4-201ENST00000309602 RTL8CO15255 209 aa12.09□□□□□ -0.47
LRFN4-201ENST00000309602 Q6ZR54 194 aa12.09□□□□□ -0.47
LRFN4-201ENST00000309602 HECTD4Q9Y4D8 3996 aa12.08□□□□□ -0.48
LRFN4-201ENST00000309602 SMIM26A0A096LP01 95 aa12.08□□□□□ -0.48
LRFN4-201ENST00000309602 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
LRFN4-201ENST00000309602 DNAH2Q9P225 4427 aa12.07□□□□□ -0.48
LRFN4-201ENST00000309602 WFDC13Q8IUB5 93 aa12.06□□□□□ -0.48
LRFN4-201ENST00000309602 DNAH17Q9UFH2 4485 aa12.05□□□□□ -0.48
LRFN4-201ENST00000309602 ATP5EP56381 51 aaPredicted RBP12.05□□□□□ -0.48
LRFN4-201ENST00000309602 LINC00472Q9H8W2 130 aa12.05□□□□□ -0.48
LRFN4-201ENST00000309602 IGLV9-49A0A0B4J1Y8 123 aa12.01□□□□□ -0.49
LRFN4-201ENST00000309602 PSORS1C2Q9UIG4 136 aa12□□□□□ -0.49
LRFN4-201ENST00000309602 BRK1Q8WUW1 75 aa12□□□□□ -0.49
LRFN4-201ENST00000309602 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
LRFN4-201ENST00000309602 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
LRFN4-201ENST00000309602 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
LRFN4-201ENST00000309602 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
LRFN4-201ENST00000309602 ZCCHC13Q8WW36 166 aaKnown RBP11.99□□□□□ -0.49
LRFN4-201ENST00000309602 PLAC8Q9NZF1 115 aa11.99□□□□□ -0.49
LRFN4-201ENST00000309602 A8MWP4 228 aa11.98□□□□□ -0.49
LRFN4-201ENST00000309602 SEC61GP60059 68 aa11.96□□□□□ -0.49
LRFN4-201ENST00000309602 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
LRFN4-201ENST00000309602 C1orf195Q5TG92 126 aa11.95□□□□□ -0.5
LRFN4-201ENST00000309602 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
LRFN4-201ENST00000309602 FAM229BQ4G0N7 80 aa11.94□□□□□ -0.5
LRFN4-201ENST00000309602 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
LRFN4-201ENST00000309602 V9GYY9 64 aa11.93□□□□□ -0.5
LRFN4-201ENST00000309602 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
LRFN4-201ENST00000309602 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
LRFN4-201ENST00000309602 ZNF861PO60384 105 aa11.9□□□□□ -0.5
LRFN4-201ENST00000309602 ANAPC11Q9NYG5 84 aa11.9□□□□□ -0.5
LRFN4-201ENST00000309602 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
LRFN4-201ENST00000309602 Q96NJ1 140 aa11.9□□□□□ -0.5
LRFN4-201ENST00000309602 LY6G6CO95867 125 aa11.89□□□□□ -0.51
LRFN4-201ENST00000309602 MOBPQ13875 183 aa11.88□□□□□ -0.51
LRFN4-201ENST00000309602 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
LRFN4-201ENST00000309602 MMP24-AS1A0A0U1RRL7 71 aa11.86□□□□□ -0.51
LRFN4-201ENST00000309602 MP68P56378 58 aa11.85□□□□□ -0.51
LRFN4-201ENST00000309602 NDUFB1O75438 58 aa11.83□□□□□ -0.52
LRFN4-201ENST00000309602 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
LRFN4-201ENST00000309602 H0Y9P7 68 aa11.8□□□□□ -0.52
LRFN4-201ENST00000309602 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
LRFN4-201ENST00000309602 TRAV22A0A0B4J277 110 aa11.79□□□□□ -0.52
LRFN4-201ENST00000309602 hDV103S1A0JD37 113 aa11.79□□□□□ -0.52
LRFN4-201ENST00000309602 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
LRFN4-201ENST00000309602 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
LRFN4-201ENST00000309602 PRR4Q16378 134 aa11.76□□□□□ -0.53
LRFN4-201ENST00000309602 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
LRFN4-201ENST00000309602 ASB16-AS1Q495Z4 193 aa11.75□□□□□ -0.53
LRFN4-201ENST00000309602 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
LRFN4-201ENST00000309602 C1orf64Q8NEQ6 169 aa11.74□□□□□ -0.53
LRFN4-201ENST00000309602 H3BPC8 53 aa11.74□□□□□ -0.53
LRFN4-201ENST00000309602 C8orf17Q9NRJ1 99 aa11.74□□□□□ -0.53
LRFN4-201ENST00000309602 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
LRFN4-201ENST00000309602 CYP4F30PQ9H0H9 118 aa11.72□□□□□ -0.53
LRFN4-201ENST00000309602 IGHV6-1A0A0B4J1U7 121 aa11.71□□□□□ -0.54
LRFN4-201ENST00000309602 A0A1B0GVX0 72 aa11.71□□□□□ -0.54
LRFN4-201ENST00000309602 ALMS1Q8TCU4 4167 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms