RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 C9orf163Q8N9P6 203 aa12.36□□□□□ -0.43
NFIL3-201ENST00000297689 DSCR10P59022 87 aa12.34□□□□□ -0.43
NFIL3-201ENST00000297689 NBDYA0A0U1RRE5 68 aa12.34□□□□□ -0.43
NFIL3-201ENST00000297689 IGFL1Q6UW32 110 aa12.34□□□□□ -0.43
NFIL3-201ENST00000297689 H0Y9J4 135 aa12.33□□□□□ -0.44
NFIL3-201ENST00000297689 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
NFIL3-201ENST00000297689 FAM236DA0A1B0GTK5 79 aa12.33□□□□□ -0.44
NFIL3-201ENST00000297689 FAM236CP0DP71 79 aa12.33□□□□□ -0.44
NFIL3-201ENST00000297689 Q6ZRN7 208 aaPredicted RBP12.33□□□□□ -0.44
NFIL3-201ENST00000297689 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
NFIL3-201ENST00000297689 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
NFIL3-201ENST00000297689 F8WEM9 126 aa12.31□□□□□ -0.44
NFIL3-201ENST00000297689 TMEM254Q8TBM7 123 aa12.31□□□□□ -0.44
NFIL3-201ENST00000297689 NDUFC1O43677 76 aa12.3□□□□□ -0.44
NFIL3-201ENST00000297689 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
NFIL3-201ENST00000297689 SPRR1BP22528 89 aa12.3□□□□□ -0.44
NFIL3-201ENST00000297689 HIGD2AQ9BW72 106 aa12.3□□□□□ -0.44
NFIL3-201ENST00000297689 A0A0U1RQV1 116 aa12.27□□□□□ -0.45
NFIL3-201ENST00000297689 LCE6AA0A183 80 aa12.25□□□□□ -0.45
NFIL3-201ENST00000297689 K7EQZ3 153 aa12.25□□□□□ -0.45
NFIL3-201ENST00000297689 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
NFIL3-201ENST00000297689 PANO1I0J062 215 aa12.23□□□□□ -0.45
NFIL3-201ENST00000297689 SERP1Q9Y6X1 66 aa12.22□□□□□ -0.45
NFIL3-201ENST00000297689 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
NFIL3-201ENST00000297689 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
NFIL3-201ENST00000297689 UBE2AP49459 152 aa12.21□□□□□ -0.45
NFIL3-201ENST00000297689 KRTAP13-1Q8IUC0 172 aa12.21□□□□□ -0.45
NFIL3-201ENST00000297689 A0A087WSZ3 146 aa12.18□□□□□ -0.46
NFIL3-201ENST00000297689 Q5XG85 94 aa12.17□□□□□ -0.46
NFIL3-201ENST00000297689 FAM30AQ9NZY2 134 aa12.17□□□□□ -0.46
NFIL3-201ENST00000297689 ATP5EP56381 51 aaPredicted RBP12.16□□□□□ -0.46
NFIL3-201ENST00000297689 DNAH2Q9P225 4427 aa12.14□□□□□ -0.47
NFIL3-201ENST00000297689 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
NFIL3-201ENST00000297689 SPACA4Q8TDM5 124 aa12.14□□□□□ -0.47
NFIL3-201ENST00000297689 DEFB116Q30KQ4 102 aa12.12□□□□□ -0.47
NFIL3-201ENST00000297689 Q6ZR54 194 aa12.12□□□□□ -0.47
NFIL3-201ENST00000297689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.12□□□□□ -0.47
NFIL3-201ENST00000297689 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
NFIL3-201ENST00000297689 ZCCHC13Q8WW36 166 aaKnown RBP12.1□□□□□ -0.47
NFIL3-201ENST00000297689 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
NFIL3-201ENST00000297689 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
NFIL3-201ENST00000297689 A0A087WTM6 91 aa12.09□□□□□ -0.47
NFIL3-201ENST00000297689 LINC00472Q9H8W2 130 aa12.09□□□□□ -0.47
NFIL3-201ENST00000297689 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
NFIL3-201ENST00000297689 KRTAP29-1A8MX34 341 aaPredicted RBP12.07□□□□□ -0.48
NFIL3-201ENST00000297689 C4orf26Q17RF5 130 aa12.05□□□□□ -0.48
NFIL3-201ENST00000297689 RPL37AP61513 92 aaKnown RBP12.04□□□□□ -0.48
NFIL3-201ENST00000297689 C5orf47Q569G3 176 aa12.04□□□□□ -0.48
NFIL3-201ENST00000297689 PRR15Q8IV56 129 aa12.02□□□□□ -0.48
NFIL3-201ENST00000297689 DNAH6Q9C0G6 4158 aa12.02□□□□□ -0.48
NFIL3-201ENST00000297689 LINC00483Q53H64 154 aa12.01□□□□□ -0.49
NFIL3-201ENST00000297689 SMIM26A0A096LP01 95 aa12□□□□□ -0.49
NFIL3-201ENST00000297689 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
NFIL3-201ENST00000297689 A8MWP4 228 aa11.99□□□□□ -0.49
NFIL3-201ENST00000297689 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
NFIL3-201ENST00000297689 RTL8CO15255 209 aa11.97□□□□□ -0.49
NFIL3-201ENST00000297689 LY6G6CO95867 125 aa11.96□□□□□ -0.5
NFIL3-201ENST00000297689 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.5
NFIL3-201ENST00000297689 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
NFIL3-201ENST00000297689 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
NFIL3-201ENST00000297689 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
NFIL3-201ENST00000297689 HRCT1Q6UXD1 115 aa11.93□□□□□ -0.5
NFIL3-201ENST00000297689 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
NFIL3-201ENST00000297689 ALMS1Q8TCU4 4167 aa11.93□□□□□ -0.5
NFIL3-201ENST00000297689 Q96NJ1 140 aa11.93□□□□□ -0.5
NFIL3-201ENST00000297689 CASC2Q6XLA1 102 aa11.92□□□□□ -0.5
NFIL3-201ENST00000297689 FAM229BQ4G0N7 80 aa11.9□□□□□ -0.51
NFIL3-201ENST00000297689 IGLV9-49A0A0B4J1Y8 123 aa11.88□□□□□ -0.51
NFIL3-201ENST00000297689 MMP24-AS1A0A0U1RRL7 71 aa11.88□□□□□ -0.51
NFIL3-201ENST00000297689 ZNF706Q9Y5V0 76 aaPredicted RBP11.88□□□□□ -0.51
NFIL3-201ENST00000297689 FRAS1Q86XX4 4008 aa11.86□□□□□ -0.51
NFIL3-201ENST00000297689 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
NFIL3-201ENST00000297689 ZNF861PO60384 105 aa11.86□□□□□ -0.51
NFIL3-201ENST00000297689 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
NFIL3-201ENST00000297689 hDV103S1A0JD37 113 aa11.85□□□□□ -0.51
NFIL3-201ENST00000297689 MP68P56378 58 aa11.85□□□□□ -0.51
NFIL3-201ENST00000297689 MOBPQ13875 183 aa11.85□□□□□ -0.51
NFIL3-201ENST00000297689 CYP4F30PQ9H0H9 118 aa11.85□□□□□ -0.51
NFIL3-201ENST00000297689 TRAV22A0A0B4J277 110 aa11.83□□□□□ -0.51
NFIL3-201ENST00000297689 H3BPC8 53 aa11.83□□□□□ -0.52
NFIL3-201ENST00000297689 NDUFB1O75438 58 aa11.82□□□□□ -0.52
NFIL3-201ENST00000297689 HYDINQ4G0P3 5121 aa11.82□□□□□ -0.52
NFIL3-201ENST00000297689 LINC00208Q96KT6 92 aa11.8□□□□□ -0.52
NFIL3-201ENST00000297689 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
NFIL3-201ENST00000297689 C1orf64Q8NEQ6 169 aa11.8□□□□□ -0.52
NFIL3-201ENST00000297689 H0Y9P7 68 aa11.79□□□□□ -0.52
NFIL3-201ENST00000297689 ANAPC11Q9NYG5 84 aa11.78□□□□□ -0.52
NFIL3-201ENST00000297689 SACSQ9NZJ4 4579 aa11.76□□□□□ -0.53
NFIL3-201ENST00000297689 KRTAP10-2P60368 255 aa11.76□□□□□ -0.53
NFIL3-201ENST00000297689 FAT2Q9NYQ8 4349 aa11.74□□□□□ -0.53
NFIL3-201ENST00000297689 IGLV7-43P04211 117 aa11.73□□□□□ -0.53
NFIL3-201ENST00000297689 C8orf17Q9NRJ1 99 aa11.73□□□□□ -0.53
NFIL3-201ENST00000297689 PKD1P98161 4303 aa11.73□□□□□ -0.53
NFIL3-201ENST00000297689 SPANXA2-OT1Q8N9U9 137 aa11.72□□□□□ -0.53
NFIL3-201ENST00000297689 LINC00336Q6ZUF6 198 aa11.71□□□□□ -0.54
NFIL3-201ENST00000297689 A0A1B0GVX0 72 aa11.7□□□□□ -0.54
NFIL3-201ENST00000297689 PRR4Q16378 134 aa11.69□□□□□ -0.54
NFIL3-201ENST00000297689 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
NFIL3-201ENST00000297689 TP53AIP1Q9HCN2 124 aa11.67□□□□□ -0.54
NFIL3-201ENST00000297689 Q1T7F1 81 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms