RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
KCTD3-201ENST00000259154 KRTAP24-1Q3LI83 254 aa9.76□□□□□ -0.85
KCTD3-201ENST00000259154 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
KCTD3-201ENST00000259154 Q8NAQ8 132 aa9.75□□□□□ -0.85
KCTD3-201ENST00000259154 SPINK1P00995 79 aa9.73□□□□□ -0.85
KCTD3-201ENST00000259154 OCR1Q9BZK8 76 aa9.72□□□□□ -0.85
KCTD3-201ENST00000259154 hDV103S1A0JD37 113 aa9.71□□□□□ -0.86
KCTD3-201ENST00000259154 IGLV8-61A0A075B6I0 122 aa9.7□□□□□ -0.86
KCTD3-201ENST00000259154 EPM2AB3EWF7 344 aa9.7□□□□□ -0.86
KCTD3-201ENST00000259154 CASC10Q5T4H9 136 aa9.7□□□□□ -0.86
KCTD3-201ENST00000259154 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
KCTD3-201ENST00000259154 C15orf56Q8N910 161 aa9.69□□□□□ -0.86
KCTD3-201ENST00000259154 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
KCTD3-201ENST00000259154 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
KCTD3-201ENST00000259154 CSMD3Q7Z407 3707 aa9.67□□□□□ -0.86
KCTD3-201ENST00000259154 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
KCTD3-201ENST00000259154 PRR34Q9NV39 138 aa9.65□□□□□ -0.86
KCTD3-201ENST00000259154 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
KCTD3-201ENST00000259154 LINC01556Q5JQF7 62 aa9.63□□□□□ -0.87
KCTD3-201ENST00000259154 COA5Q86WW8 74 aa9.63□□□□□ -0.87
KCTD3-201ENST00000259154 F8WDY8 70 aa9.62□□□□□ -0.87
KCTD3-201ENST00000259154 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
KCTD3-201ENST00000259154 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
KCTD3-201ENST00000259154 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
KCTD3-201ENST00000259154 DSCR10P59022 87 aa9.59□□□□□ -0.87
KCTD3-201ENST00000259154 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
KCTD3-201ENST00000259154 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
KCTD3-201ENST00000259154 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
KCTD3-201ENST00000259154 MOBPQ13875 183 aa9.57□□□□□ -0.88
KCTD3-201ENST00000259154 LINC00588Q9Y4M8 146 aa9.57□□□□□ -0.88
KCTD3-201ENST00000259154 A8MU10 97 aa9.54□□□□□ -0.88
KCTD3-201ENST00000259154 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
KCTD3-201ENST00000259154 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
KCTD3-201ENST00000259154 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
KCTD3-201ENST00000259154 PRR15Q8IV56 129 aa9.51□□□□□ -0.89
KCTD3-201ENST00000259154 LYSTQ99698 3801 aa9.51□□□□□ -0.89
KCTD3-201ENST00000259154 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
KCTD3-201ENST00000259154 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
KCTD3-201ENST00000259154 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
KCTD3-201ENST00000259154 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
KCTD3-201ENST00000259154 IGLV5-48A0A075B6I7 105 aa9.49□□□□□ -0.89
KCTD3-201ENST00000259154 LOC101927531A0A1B0GV80 90 aa9.48□□□□□ -0.89
KCTD3-201ENST00000259154 FLG2Q5D862 2391 aaPredicted RBP9.48□□□□□ -0.89
KCTD3-201ENST00000259154 A8MWP4 228 aa9.48□□□□□ -0.89
KCTD3-201ENST00000259154 CD164Q04900 197 aa9.48□□□□□ -0.89
KCTD3-201ENST00000259154 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
KCTD3-201ENST00000259154 A0A1B0GU69 56 aa9.47□□□□□ -0.89
KCTD3-201ENST00000259154 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.9
KCTD3-201ENST00000259154 H3BNG1 76 aa9.45□□□□□ -0.9
KCTD3-201ENST00000259154 LY6G6CO95867 125 aa9.45□□□□□ -0.9
KCTD3-201ENST00000259154 MDFIQ99750 246 aa9.45□□□□□ -0.9
KCTD3-201ENST00000259154 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
KCTD3-201ENST00000259154 PRAC1Q96KF2 57 aa9.43□□□□□ -0.9
KCTD3-201ENST00000259154 Q1T7F1 81 aa9.43□□□□□ -0.9
KCTD3-201ENST00000259154 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
KCTD3-201ENST00000259154 K7EIL1 84 aa9.42□□□□□ -0.9
KCTD3-201ENST00000259154 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
KCTD3-201ENST00000259154 C16orf90A8MZG2 172 aa9.41□□□□□ -0.9
KCTD3-201ENST00000259154 A0A1B0GW54 56 aa9.4□□□□□ -0.9
KCTD3-201ENST00000259154 Q8N9P0 234 aaPredicted RBP9.4□□□□□ -0.91
KCTD3-201ENST00000259154 Q5VV11 94 aa9.39□□□□□ -0.91
KCTD3-201ENST00000259154 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
KCTD3-201ENST00000259154 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
KCTD3-201ENST00000259154 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
KCTD3-201ENST00000259154 DNAH10Q8IVF4 4471 aa9.35□□□□□ -0.91
KCTD3-201ENST00000259154 C8orf17Q9NRJ1 99 aa9.35□□□□□ -0.91
KCTD3-201ENST00000259154 ZNF706Q9Y5V0 76 aaPredicted RBP9.35□□□□□ -0.91
KCTD3-201ENST00000259154 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
KCTD3-201ENST00000259154 TP53AIP1Q9HCN2 124 aa9.34□□□□□ -0.91
KCTD3-201ENST00000259154 H3BPC8 53 aa9.34□□□□□ -0.91
KCTD3-201ENST00000259154 ACYP2P14621 99 aa9.34□□□□□ -0.91
KCTD3-201ENST00000259154 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
KCTD3-201ENST00000259154 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
KCTD3-201ENST00000259154 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
KCTD3-201ENST00000259154 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
KCTD3-201ENST00000259154 SPINK7P58062 85 aa9.3□□□□□ -0.92
KCTD3-201ENST00000259154 C8orf87E5RJ46 101 aa9.29□□□□□ -0.92
KCTD3-201ENST00000259154 IGLV5-52A0A0A0MRZ9 124 aa9.27□□□□□ -0.93
KCTD3-201ENST00000259154 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
KCTD3-201ENST00000259154 RTL8CO15255 209 aa9.26□□□□□ -0.93
KCTD3-201ENST00000259154 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
KCTD3-201ENST00000259154 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
KCTD3-201ENST00000259154 NBDYA0A0U1RRE5 68 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 K7ERS5 55 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 SPANXA2-OT1Q8N9U9 137 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 LCA10Q71F78 164 aa9.22□□□□□ -0.93
KCTD3-201ENST00000259154 LINC00313P59037 77 aa9.2□□□□□ -0.94
KCTD3-201ENST00000259154 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
KCTD3-201ENST00000259154 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
KCTD3-201ENST00000259154 DNAH1Q9P2D7 4330 aa9.19□□□□□ -0.94
KCTD3-201ENST00000259154 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
KCTD3-201ENST00000259154 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
KCTD3-201ENST00000259154 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
KCTD3-201ENST00000259154 UQCR11O14957 56 aa9.17□□□□□ -0.94
KCTD3-201ENST00000259154 HRES1P13985 223 aa9.16□□□□□ -0.94
KCTD3-201ENST00000259154 PLA2G2DQ9UNK4 145 aa9.16□□□□□ -0.94
KCTD3-201ENST00000259154 Q75L30 129 aa9.15□□□□□ -0.94
KCTD3-201ENST00000259154 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms