RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 ETDCA0A1B0GVM5 59 aa4.1□□□□□ -1.75
SGIP1-201ENST00000237247 MAP1AP78559 2803 aaPredicted RBP4.1□□□□□ -1.75
SGIP1-201ENST00000237247 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
SGIP1-201ENST00000237247 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
SGIP1-201ENST00000237247 ABCA12Q86UK0 2595 aa4.09□□□□□ -1.75
SGIP1-201ENST00000237247 SMIM29Q86T20 159 aa4.09□□□□□ -1.75
SGIP1-201ENST00000237247 H0Y9J4 135 aa4.09□□□□□ -1.76
SGIP1-201ENST00000237247 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.76
SGIP1-201ENST00000237247 C15orf56Q8N910 161 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 KLK12Q9UKR0 248 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 TNP2Q05952 138 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 HIVEP1P15822 2718 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 CNBPP62633 177 aaKnown RBP4.08□□□□□ -1.76
SGIP1-201ENST00000237247 DEFB135Q30KP9 77 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 CAMK2N2Q96S95 79 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 DHRS4-AS1Q9P1J3 65 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 POLQO75417 2590 aa4.08□□□□□ -1.76
SGIP1-201ENST00000237247 Q8N9L7 120 aa4.07□□□□□ -1.76
SGIP1-201ENST00000237247 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
SGIP1-201ENST00000237247 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
SGIP1-201ENST00000237247 SPRR1AP35321 89 aa4.07□□□□□ -1.76
SGIP1-201ENST00000237247 H3BPC8 53 aa4.07□□□□□ -1.76
SGIP1-201ENST00000237247 TEP1Q99973 2627 aaKnown RBP4.06□□□□□ -1.76
SGIP1-201ENST00000237247 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 SPRR4Q96PI1 79 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 SACSQ9NZJ4 4579 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
SGIP1-201ENST00000237247 HIGD2BQ4VC39 106 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 XAGE1AQ9HD64 81 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 LINC01556Q5JQF7 62 aa4.06□□□□□ -1.76
SGIP1-201ENST00000237247 MYO9AB2RTY4 2548 aa4.05□□□□□ -1.76
SGIP1-201ENST00000237247 Q8N377 158 aa4.05□□□□□ -1.76
SGIP1-201ENST00000237247 HIVEP2P31629 2446 aa4.05□□□□□ -1.76
SGIP1-201ENST00000237247 KPRPQ5T749 579 aaPredicted RBP4.04□□□□□ -1.76
SGIP1-201ENST00000237247 Q8NBF4 154 aa4.04□□□□□ -1.76
SGIP1-201ENST00000237247 TLN2Q9Y4G6 2542 aa4.04□□□□□ -1.76
SGIP1-201ENST00000237247 Q6ZRX8 168 aa4.04□□□□□ -1.76
SGIP1-201ENST00000237247 ST20-AS1Q8NBB2 130 aa4.03□□□□□ -1.76
SGIP1-201ENST00000237247 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
SGIP1-201ENST00000237247 RTL8CO15255 209 aa4.03□□□□□ -1.77
SGIP1-201ENST00000237247 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.77
SGIP1-201ENST00000237247 DEFB4AO15263 64 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 C9orf163Q8N9P6 203 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 A0A1W2PNM2 257 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 DNAH10OSP0CZ25 163 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 SONP18583 2426 aaKnown RBP4.02□□□□□ -1.77
SGIP1-201ENST00000237247 FLNAP21333 2647 aaKnown RBP4.02□□□□□ -1.77
SGIP1-201ENST00000237247 IGLV1-50A0A075B6I6 118 aa4.02□□□□□ -1.77
SGIP1-201ENST00000237247 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
SGIP1-201ENST00000237247 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
SGIP1-201ENST00000237247 PRR4Q16378 134 aa4.01□□□□□ -1.77
SGIP1-201ENST00000237247 ACANP16112 2415 aa4□□□□□ -1.77
SGIP1-201ENST00000237247 NOTCH3Q9UM47 2321 aa4□□□□□ -1.77
SGIP1-201ENST00000237247 COA5Q86WW8 74 aa4□□□□□ -1.77
SGIP1-201ENST00000237247 C2CD3Q4AC94 2353 aa4□□□□□ -1.77
SGIP1-201ENST00000237247 C1orf137Q5JT78 98 aa4□□□□□ -1.77
SGIP1-201ENST00000237247 HTN3P15516 51 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 SPINK7P58062 85 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 DSCR10P59022 87 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 RPL37AP8A6NKH3 93 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 LINC00476Q8WZB0 136 aa3.99□□□□□ -1.77
SGIP1-201ENST00000237247 F8P00451 2351 aa3.98□□□□□ -1.77
SGIP1-201ENST00000237247 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
SGIP1-201ENST00000237247 ADM2Q7Z4H4 148 aa3.97□□□□□ -1.77
SGIP1-201ENST00000237247 JMJD1CQ15652 2540 aa3.97□□□□□ -1.77
SGIP1-201ENST00000237247 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
SGIP1-201ENST00000237247 IGHV6-1A0A0B4J1U7 121 aa3.97□□□□□ -1.77
SGIP1-201ENST00000237247 MTORP42345 2549 aa3.97□□□□□ -1.77
SGIP1-201ENST00000237247 WNK1Q9H4A3 2382 aa3.96□□□□□ -1.77
SGIP1-201ENST00000237247 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
SGIP1-201ENST00000237247 SMR3AQ99954 134 aa3.96□□□□□ -1.78
SGIP1-201ENST00000237247 HSPG2P98160 4391 aa3.96□□□□□ -1.78
SGIP1-201ENST00000237247 APOBP04114 4563 aaKnown RBP3.96□□□□□ -1.78
SGIP1-201ENST00000237247 IGKV2D-24A0A075B6R9 120 aa3.96□□□□□ -1.78
SGIP1-201ENST00000237247 SPRR1BP22528 89 aa3.95□□□□□ -1.78
SGIP1-201ENST00000237247 RYR2Q92736 4967 aa3.95□□□□□ -1.78
SGIP1-201ENST00000237247 K7EQZ3 153 aa3.95□□□□□ -1.78
SGIP1-201ENST00000237247 ZNF706Q9Y5V0 76 aaPredicted RBP3.95□□□□□ -1.78
SGIP1-201ENST00000237247 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
SGIP1-201ENST00000237247 REG3GQ6UW15 175 aa3.94□□□□□ -1.78
SGIP1-201ENST00000237247 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
SGIP1-201ENST00000237247 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
SGIP1-201ENST00000237247 DEFB131BA0A096LNP1 70 aa3.93□□□□□ -1.78
SGIP1-201ENST00000237247 H0Y9P7 68 aa3.93□□□□□ -1.78
SGIP1-201ENST00000237247 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
SGIP1-201ENST00000237247 IGFL1Q6UW32 110 aa3.92□□□□□ -1.78
SGIP1-201ENST00000237247 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
SGIP1-201ENST00000237247 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
SGIP1-201ENST00000237247 FAM168BA1KXE4 195 aa3.91□□□□□ -1.78
SGIP1-201ENST00000237247 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
SGIP1-201ENST00000237247 SPAG11AQ6PDA7 123 aa3.91□□□□□ -1.78
SGIP1-201ENST00000237247 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
SGIP1-201ENST00000237247 Q6ZR54 194 aa3.9□□□□□ -1.78
SGIP1-201ENST00000237247 ROMO1P60602 79 aa3.9□□□□□ -1.79
SGIP1-201ENST00000237247 SETD2Q9BYW2 2564 aaPredicted RBP3.9□□□□□ -1.79
SGIP1-201ENST00000237247 TNXBP22105 4242 aa3.89□□□□□ -1.79
SGIP1-201ENST00000237247 A8MWP4 228 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms