RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 EPM2AB3EWF7 344 aa13.71□□□□□ -0.21
SMARCD2-201ENST00000225742 Q6ZRN7 208 aaPredicted RBP13.7□□□□□ -0.22
SMARCD2-201ENST00000225742 MDFIQ99750 246 aa13.69□□□□□ -0.22
SMARCD2-201ENST00000225742 KRTAP11-1Q8IUC1 163 aa13.68□□□□□ -0.22
SMARCD2-201ENST00000225742 MGAM2Q2M2H8 2515 aa13.67□□□□□ -0.22
SMARCD2-201ENST00000225742 LCE6AA0A183 80 aa13.67□□□□□ -0.22
SMARCD2-201ENST00000225742 K7EQZ3 153 aa13.66□□□□□ -0.22
SMARCD2-201ENST00000225742 DNAH9Q9NYC9 4486 aa13.66□□□□□ -0.22
SMARCD2-201ENST00000225742 STAB2Q8WWQ8 2551 aa13.63□□□□□ -0.23
SMARCD2-201ENST00000225742 HCG22E2RYF7 251 aa13.62□□□□□ -0.23
SMARCD2-201ENST00000225742 A0A087WSZ3 146 aa13.62□□□□□ -0.23
SMARCD2-201ENST00000225742 FAM30AQ9NZY2 134 aa13.62□□□□□ -0.23
SMARCD2-201ENST00000225742 A0A0G2JQZ4 141 aa13.61□□□□□ -0.23
SMARCD2-201ENST00000225742 KRTAP13-1Q8IUC0 172 aa13.59□□□□□ -0.23
SMARCD2-201ENST00000225742 SPACA4Q8TDM5 124 aa13.56□□□□□ -0.24
SMARCD2-201ENST00000225742 C5orf47Q569G3 176 aa13.55□□□□□ -0.24
SMARCD2-201ENST00000225742 Q5XG85 94 aa13.54□□□□□ -0.24
SMARCD2-201ENST00000225742 DNAH10Q8IVF4 4471 aa13.54□□□□□ -0.24
SMARCD2-201ENST00000225742 COL7A1Q02388 2944 aa13.54□□□□□ -0.24
SMARCD2-201ENST00000225742 PANO1I0J062 215 aa13.53□□□□□ -0.24
SMARCD2-201ENST00000225742 A0A087WTM6 91 aa13.51□□□□□ -0.25
SMARCD2-201ENST00000225742 SMIM26A0A096LP01 95 aa13.51□□□□□ -0.25
SMARCD2-201ENST00000225742 ZCCHC13Q8WW36 166 aaKnown RBP13.5□□□□□ -0.25
SMARCD2-201ENST00000225742 DEFB116Q30KQ4 102 aa13.48□□□□□ -0.25
SMARCD2-201ENST00000225742 LINC00472Q9H8W2 130 aa13.48□□□□□ -0.25
SMARCD2-201ENST00000225742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.48□□□□□ -0.25
SMARCD2-201ENST00000225742 RPL37AP61513 92 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-201ENST00000225742 A8MWP4 228 aa13.46□□□□□ -0.26
SMARCD2-201ENST00000225742 PRR15Q8IV56 129 aa13.46□□□□□ -0.26
SMARCD2-201ENST00000225742 KRTAP29-1A8MX34 341 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-201ENST00000225742 LINC00483Q53H64 154 aa13.43□□□□□ -0.26
SMARCD2-201ENST00000225742 ZNF706Q9Y5V0 76 aaPredicted RBP13.43□□□□□ -0.26
SMARCD2-201ENST00000225742 C4orf26Q17RF5 130 aa13.43□□□□□ -0.26
SMARCD2-201ENST00000225742 WFDC13Q8IUB5 93 aa13.43□□□□□ -0.26
SMARCD2-201ENST00000225742 Q6ZR54 194 aa13.42□□□□□ -0.26
SMARCD2-201ENST00000225742 LYSTQ99698 3801 aa13.41□□□□□ -0.26
SMARCD2-201ENST00000225742 RTL8CO15255 209 aa13.4□□□□□ -0.26
SMARCD2-201ENST00000225742 MP68P56378 58 aa13.39□□□□□ -0.27
SMARCD2-201ENST00000225742 CASC2Q6XLA1 102 aa13.39□□□□□ -0.27
SMARCD2-201ENST00000225742 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
SMARCD2-201ENST00000225742 PLAC8Q9NZF1 115 aa13.38□□□□□ -0.27
SMARCD2-201ENST00000225742 NDUFB1O75438 58 aa13.36□□□□□ -0.27
SMARCD2-201ENST00000225742 H3BPC8 53 aa13.35□□□□□ -0.27
SMARCD2-201ENST00000225742 CSMD3Q7Z407 3707 aa13.35□□□□□ -0.27
SMARCD2-201ENST00000225742 IGLV5-52A0A0A0MRZ9 124 aa13.34□□□□□ -0.27
SMARCD2-201ENST00000225742 HRCT1Q6UXD1 115 aa13.34□□□□□ -0.27
SMARCD2-201ENST00000225742 FP248Q71RG6 208 aaPredicted RBP13.34□□□□□ -0.27
SMARCD2-201ENST00000225742 VPS13DQ5THJ4 4388 aa13.34□□□□□ -0.27
SMARCD2-201ENST00000225742 DNAH7Q8WXX0 4024 aa13.34□□□□□ -0.27
SMARCD2-201ENST00000225742 PSORS1C2Q9UIG4 136 aa13.32□□□□□ -0.28
SMARCD2-201ENST00000225742 IGLV9-49A0A0B4J1Y8 123 aa13.31□□□□□ -0.28
SMARCD2-201ENST00000225742 ZNF861PO60384 105 aa13.29□□□□□ -0.28
SMARCD2-201ENST00000225742 CYP4F30PQ9H0H9 118 aa13.28□□□□□ -0.28
SMARCD2-201ENST00000225742 MMP24-AS1A0A0U1RRL7 71 aa13.27□□□□□ -0.29
SMARCD2-201ENST00000225742 C1orf134Q5TEV5 83 aa13.27□□□□□ -0.29
SMARCD2-201ENST00000225742 WWC2-AS2Q96NR7 200 aa13.27□□□□□ -0.29
SMARCD2-201ENST00000225742 hDV103S1A0JD37 113 aa13.26□□□□□ -0.29
SMARCD2-201ENST00000225742 Q96NJ1 140 aa13.26□□□□□ -0.29
SMARCD2-201ENST00000225742 TRAV22A0A0B4J277 110 aa13.25□□□□□ -0.29
SMARCD2-201ENST00000225742 TENM2Q9NT68 2774 aa13.25□□□□□ -0.29
SMARCD2-201ENST00000225742 H0Y9P7 68 aa13.25□□□□□ -0.29
SMARCD2-201ENST00000225742 LINC00208Q96KT6 92 aa13.23□□□□□ -0.29
SMARCD2-201ENST00000225742 MOBPQ13875 183 aa13.22□□□□□ -0.29
SMARCD2-201ENST00000225742 FAM229BQ4G0N7 80 aa13.22□□□□□ -0.29
SMARCD2-201ENST00000225742 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
SMARCD2-201ENST00000225742 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
SMARCD2-201ENST00000225742 SPANXA2-OT1Q8N9U9 137 aa13.18□□□□□ -0.3
SMARCD2-201ENST00000225742 C1orf64Q8NEQ6 169 aa13.18□□□□□ -0.3
SMARCD2-201ENST00000225742 TP53AIP1Q9HCN2 124 aa13.17□□□□□ -0.3
SMARCD2-201ENST00000225742 SRRM2Q9UQ35 2752 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-201ENST00000225742 PRKDCP78527 4128 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-201ENST00000225742 IGLV7-43P04211 117 aa13.14□□□□□ -0.31
SMARCD2-201ENST00000225742 C8orf17Q9NRJ1 99 aa13.14□□□□□ -0.31
SMARCD2-201ENST00000225742 DNAH17Q9UFH2 4485 aa13.13□□□□□ -0.31
SMARCD2-201ENST00000225742 A0A1B0GVX0 72 aa13.13□□□□□ -0.31
SMARCD2-201ENST00000225742 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
SMARCD2-201ENST00000225742 HECTD4Q9Y4D8 3996 aa13.11□□□□□ -0.31
SMARCD2-201ENST00000225742 LY6G6CO95867 125 aa13.08□□□□□ -0.32
SMARCD2-201ENST00000225742 MPLKIPQ8TAP9 179 aa13.08□□□□□ -0.32
SMARCD2-201ENST00000225742 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
SMARCD2-201ENST00000225742 CD164Q04900 197 aa13.06□□□□□ -0.32
SMARCD2-201ENST00000225742 Q1T7F1 81 aa13.05□□□□□ -0.32
SMARCD2-201ENST00000225742 IGHV6-1A0A0B4J1U7 121 aa13.04□□□□□ -0.32
SMARCD2-201ENST00000225742 PRR4Q16378 134 aa13.04□□□□□ -0.32
SMARCD2-201ENST00000225742 LINC00336Q6ZUF6 198 aa13.04□□□□□ -0.32
SMARCD2-201ENST00000225742 SSBP3-AS1Q7Z2R9 100 aa13.02□□□□□ -0.32
SMARCD2-201ENST00000225742 MRPL34Q9BQ48 92 aaKnown RBP13.01□□□□□ -0.33
SMARCD2-201ENST00000225742 PRO0628Q9UI54 55 aa13□□□□□ -0.33
SMARCD2-201ENST00000225742 DNAH6Q9C0G6 4158 aa12.99□□□□□ -0.33
SMARCD2-201ENST00000225742 DNAH2Q9P225 4427 aa12.98□□□□□ -0.33
SMARCD2-201ENST00000225742 IGLV7-46A0A075B6I9 117 aa12.95□□□□□ -0.34
SMARCD2-201ENST00000225742 CIRBP-AS1Q8TBR5 109 aa12.95□□□□□ -0.34
SMARCD2-201ENST00000225742 V9GYY9 64 aa12.95□□□□□ -0.34
SMARCD2-201ENST00000225742 NDUFS5O43920 106 aa12.92□□□□□ -0.34
SMARCD2-201ENST00000225742 KRTAP10-2P60368 255 aa12.92□□□□□ -0.34
SMARCD2-201ENST00000225742 DNAH8Q96JB1 4490 aa12.91□□□□□ -0.34
SMARCD2-201ENST00000225742 KMT2AQ03164 3969 aa12.91□□□□□ -0.34
SMARCD2-201ENST00000225742 MEGF8Q7Z7M0 2845 aa12.91□□□□□ -0.34
SMARCD2-201ENST00000225742 Q6ZSA8 131 aa12.9□□□□□ -0.34
SMARCD2-201ENST00000225742 C8orf87E5RJ46 101 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms