RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 FAM19A5Q7Z5A7 132 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-226ENST00000641756 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
PHGDH-226ENST00000641756 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-226ENST00000641756 Q6ZQT0 140 aa11.48□□□□□ -0.57
PHGDH-226ENST00000641756 H3BQ85 93 aa11.47□□□□□ -0.57
PHGDH-226ENST00000641756 IMUPQ9GZP8 106 aa11.47□□□□□ -0.57
PHGDH-226ENST00000641756 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
PHGDH-226ENST00000641756 IGKV3D-7A0A0C4DH55 119 aa11.47□□□□□ -0.57
PHGDH-226ENST00000641756 NUPR2A6NF83 97 aa11.47□□□□□ -0.57
PHGDH-226ENST00000641756 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-226ENST00000641756 M0R2N4 97 aa11.45□□□□□ -0.58
PHGDH-226ENST00000641756 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
PHGDH-226ENST00000641756 LOC110117498A0A087WWA1 95 aa11.45□□□□□ -0.58
PHGDH-226ENST00000641756 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
PHGDH-226ENST00000641756 DSCR8Q96T75 97 aa11.45□□□□□ -0.58
PHGDH-226ENST00000641756 PRKDCP78527 4128 aaKnown RBP11.44□□□□□ -0.58
PHGDH-226ENST00000641756 A0A096LNI7 61 aa11.44□□□□□ -0.58
PHGDH-226ENST00000641756 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
PHGDH-226ENST00000641756 FAM236AA0A1B0GUQ0 79 aa11.44□□□□□ -0.58
PHGDH-226ENST00000641756 FAM236BA0A1B0GV22 79 aa11.44□□□□□ -0.58
PHGDH-226ENST00000641756 PRYO14603 147 aa11.43□□□□□ -0.58
PHGDH-226ENST00000641756 GHRHP01286 108 aa11.43□□□□□ -0.58
PHGDH-226ENST00000641756 Q6JHZ5 121 aa11.43□□□□□ -0.58
PHGDH-226ENST00000641756 CNBPP62633 177 aaKnown RBP11.42□□□□□ -0.58
PHGDH-226ENST00000641756 STARD9Q9P2P6 4700 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 NBDYA0A0U1RRE5 68 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 B5MCH6 92 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 KRTAP4-16G5E9R7 235 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-226ENST00000641756 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 Q6ZRX8 168 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 DEFB105AQ8NG35 78 aa11.41□□□□□ -0.58
PHGDH-226ENST00000641756 SPRR1AP35321 89 aa11.4□□□□□ -0.58
PHGDH-226ENST00000641756 Q9BRP9 147 aa11.4□□□□□ -0.58
PHGDH-226ENST00000641756 DNHD1Q96M86 4753 aa11.4□□□□□ -0.58
PHGDH-226ENST00000641756 C16orf90A8MZG2 172 aa11.39□□□□□ -0.59
PHGDH-226ENST00000641756 TRBV7-4A0A0J9YYF1 115 aa11.38□□□□□ -0.59
PHGDH-226ENST00000641756 C14orf177Q52M58 125 aa11.38□□□□□ -0.59
PHGDH-226ENST00000641756 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
PHGDH-226ENST00000641756 PDE6GP18545 87 aa11.36□□□□□ -0.59
PHGDH-226ENST00000641756 UBL5Q9BZL1 73 aa11.36□□□□□ -0.59
PHGDH-226ENST00000641756 DHRS4-AS1Q9P1J3 65 aa11.36□□□□□ -0.59
PHGDH-226ENST00000641756 Q8N377 158 aa11.36□□□□□ -0.59
PHGDH-226ENST00000641756 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
PHGDH-226ENST00000641756 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
PHGDH-226ENST00000641756 A0A087WVE0 104 aa11.34□□□□□ -0.59
PHGDH-226ENST00000641756 LINC01547P58512 204 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-226ENST00000641756 REG3GQ6UW15 175 aa11.34□□□□□ -0.59
PHGDH-226ENST00000641756 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
PHGDH-226ENST00000641756 CCDC179H3BU77 68 aa11.33□□□□□ -0.6
PHGDH-226ENST00000641756 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-226ENST00000641756 MEGF8Q7Z7M0 2845 aa11.33□□□□□ -0.6
PHGDH-226ENST00000641756 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
PHGDH-226ENST00000641756 UBE2BP63146 152 aa11.32□□□□□ -0.6
PHGDH-226ENST00000641756 C3orf22Q8N5N4 141 aa11.32□□□□□ -0.6
PHGDH-226ENST00000641756 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
PHGDH-226ENST00000641756 HIST1H4AP62805 103 aaKnown RBP11.31□□□□□ -0.6
PHGDH-226ENST00000641756 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
PHGDH-226ENST00000641756 Q6ZVQ6 151 aa11.29□□□□□ -0.6
PHGDH-226ENST00000641756 C9orf163Q8N9P6 203 aa11.29□□□□□ -0.6
PHGDH-226ENST00000641756 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.6
PHGDH-226ENST00000641756 FAM19A1Q7Z5A9 133 aa11.27□□□□□ -0.6
PHGDH-226ENST00000641756 HAMPP81172 84 aa11.27□□□□□ -0.61
PHGDH-226ENST00000641756 PRLHP81277 87 aa11.26□□□□□ -0.61
PHGDH-226ENST00000641756 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
PHGDH-226ENST00000641756 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
PHGDH-226ENST00000641756 PANO1I0J062 215 aa11.23□□□□□ -0.61
PHGDH-226ENST00000641756 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.62
PHGDH-226ENST00000641756 ATOX1O00244 68 aa11.2□□□□□ -0.62
PHGDH-226ENST00000641756 SCXQ7RTU7 201 aa11.2□□□□□ -0.62
PHGDH-226ENST00000641756 C3orf84H3BNL1 204 aa11.2□□□□□ -0.62
PHGDH-226ENST00000641756 TNP2Q05952 138 aa11.2□□□□□ -0.62
PHGDH-226ENST00000641756 HIGD2AQ9BW72 106 aa11.2□□□□□ -0.62
PHGDH-226ENST00000641756 A0A087WTM6 91 aa11.18□□□□□ -0.62
PHGDH-226ENST00000641756 KMT2AQ03164 3969 aa11.18□□□□□ -0.62
PHGDH-226ENST00000641756 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
PHGDH-226ENST00000641756 C1orf137Q5JT78 98 aa11.17□□□□□ -0.62
PHGDH-226ENST00000641756 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
PHGDH-226ENST00000641756 SMIM29Q86T20 159 aa11.16□□□□□ -0.62
PHGDH-226ENST00000641756 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
PHGDH-226ENST00000641756 DNAH2Q9P225 4427 aa11.16□□□□□ -0.62
PHGDH-226ENST00000641756 A0A1W2PNM2 257 aa11.15□□□□□ -0.62
PHGDH-226ENST00000641756 CXCL6P80162 114 aa11.15□□□□□ -0.62
PHGDH-226ENST00000641756 Q6ZR54 194 aa11.15□□□□□ -0.62
PHGDH-226ENST00000641756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-226ENST00000641756 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
PHGDH-226ENST00000641756 COX7CP15954 63 aa11.12□□□□□ -0.63
PHGDH-226ENST00000641756 NREPQ16612 68 aa11.12□□□□□ -0.63
PHGDH-226ENST00000641756 UQCRQO14949 82 aa11.12□□□□□ -0.63
PHGDH-226ENST00000641756 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
PHGDH-226ENST00000641756 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
PHGDH-226ENST00000641756 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
PHGDH-226ENST00000641756 Q8NBF4 154 aa11.1□□□□□ -0.63
PHGDH-226ENST00000641756 LINC00476Q8WZB0 136 aa11.1□□□□□ -0.63
PHGDH-226ENST00000641756 F8WEM9 126 aa11.09□□□□□ -0.63
PHGDH-226ENST00000641756 RTL8CO15255 209 aa11.09□□□□□ -0.63
PHGDH-226ENST00000641756 UBE2AP49459 152 aa11.09□□□□□ -0.63
PHGDH-226ENST00000641756 LY6G6CO95867 125 aa11.09□□□□□ -0.63
PHGDH-226ENST00000641756 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
PHGDH-226ENST00000641756 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
PHGDH-226ENST00000641756 HECTD4Q9Y4D8 3996 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms