RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
PAX6-238ENST00000638755 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
PAX6-238ENST00000638755 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
PAX6-238ENST00000638755 S100A1P23297 94 aa6.2□□□□□ -1.42
PAX6-238ENST00000638755 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
PAX6-238ENST00000638755 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
PAX6-238ENST00000638755 IGLV6-57P01721 117 aa6.19□□□□□ -1.42
PAX6-238ENST00000638755 TSPEAR-AS2P59090 65 aa6.17□□□□□ -1.42
PAX6-238ENST00000638755 A0A0U1RRA0 63 aa6.16□□□□□ -1.42
PAX6-238ENST00000638755 DPM2O94777 84 aa6.16□□□□□ -1.42
PAX6-238ENST00000638755 COA6Q5JTJ3 125 aaKnown RBP6.16□□□□□ -1.42
PAX6-238ENST00000638755 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
PAX6-238ENST00000638755 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
PAX6-238ENST00000638755 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
PAX6-238ENST00000638755 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.42
PAX6-238ENST00000638755 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.42
PAX6-238ENST00000638755 IGKCP01834 107 aa6.15□□□□□ -1.42
PAX6-238ENST00000638755 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.42
PAX6-238ENST00000638755 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
PAX6-238ENST00000638755 PLNP26678 52 aa6.14□□□□□ -1.43
PAX6-238ENST00000638755 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
PAX6-238ENST00000638755 PRYO14603 147 aa6.13□□□□□ -1.43
PAX6-238ENST00000638755 ERC2-IT1O76042 136 aa6.13□□□□□ -1.43
PAX6-238ENST00000638755 SMIM13P0DJ93 91 aa6.13□□□□□ -1.43
PAX6-238ENST00000638755 LEPROTO15243 131 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 NEBP20929 6669 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 LINC00158P58513 81 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 KRTDAPP60985 99 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 LINC01545Q5VT33 79 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 HRCT1Q6UXD1 115 aa6.12□□□□□ -1.43
PAX6-238ENST00000638755 J3QQQ9 107 aa6.11□□□□□ -1.43
PAX6-238ENST00000638755 LIMD2Q9BT23 127 aa6.11□□□□□ -1.43
PAX6-238ENST00000638755 LINC00846Q9NV44 126 aa6.11□□□□□ -1.43
PAX6-238ENST00000638755 MT2AP02795 61 aa6.1□□□□□ -1.43
PAX6-238ENST00000638755 SPRR1AP35321 89 aa6.1□□□□□ -1.43
PAX6-238ENST00000638755 COX17Q14061 63 aa6.1□□□□□ -1.43
PAX6-238ENST00000638755 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
PAX6-238ENST00000638755 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
PAX6-238ENST00000638755 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
PAX6-238ENST00000638755 HERVK_113P61574 105 aa6.09□□□□□ -1.43
PAX6-238ENST00000638755 SFTA2Q6UW10 78 aa6.09□□□□□ -1.43
PAX6-238ENST00000638755 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
PAX6-238ENST00000638755 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
PAX6-238ENST00000638755 E9PLD3 99 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 NCR3O14931 201 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 LGALS3P17931 250 aaKnown RBP6.08□□□□□ -1.44
PAX6-238ENST00000638755 HERV-K104P63124 156 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 ATOH7Q8N100 152 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 KCNQ1DNQ9H478 68 aa6.08□□□□□ -1.44
PAX6-238ENST00000638755 HIST1H2BLQ99880 126 aa6.07□□□□□ -1.44
PAX6-238ENST00000638755 B5MCH6 92 aa6.06□□□□□ -1.44
PAX6-238ENST00000638755 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
PAX6-238ENST00000638755 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
PAX6-238ENST00000638755 MT1FP04733 61 aa6.05□□□□□ -1.44
PAX6-238ENST00000638755 SNRPEP62304 92 aaKnown RBP6.05□□□□□ -1.44
PAX6-238ENST00000638755 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
PAX6-238ENST00000638755 BOD1L2Q8IYS8 172 aa6.05□□□□□ -1.44
PAX6-238ENST00000638755 Q9BRP9 147 aa6.05□□□□□ -1.44
PAX6-238ENST00000638755 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
PAX6-238ENST00000638755 S100A6P06703 90 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 S100A2P29034 98 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 NMUP48645 174 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 NPC2P61916 151 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
PAX6-238ENST00000638755 C20orf202A1L168 122 aa6.03□□□□□ -1.44
PAX6-238ENST00000638755 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
PAX6-238ENST00000638755 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
PAX6-238ENST00000638755 LINC00587B1AMM8 73 aa6.02□□□□□ -1.45
PAX6-238ENST00000638755 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
PAX6-238ENST00000638755 C5orf52A6NGY3 159 aa6.01□□□□□ -1.45
PAX6-238ENST00000638755 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
PAX6-238ENST00000638755 S100A12P80511 92 aa6.01□□□□□ -1.45
PAX6-238ENST00000638755 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
PAX6-238ENST00000638755 LITAFQ99732 161 aa6.01□□□□□ -1.45
PAX6-238ENST00000638755 H7C2G1 150 aa6□□□□□ -1.45
PAX6-238ENST00000638755 Q6ZRX8 168 aa6□□□□□ -1.45
PAX6-238ENST00000638755 PCP2Q8IVA1 136 aa6□□□□□ -1.45
PAX6-238ENST00000638755 ST20-AS1Q8NBB2 130 aa6□□□□□ -1.45
PAX6-238ENST00000638755 LOC107984156A0A0G2JMH3 177 aa5.99□□□□□ -1.45
PAX6-238ENST00000638755 ARL17AQ8IVW1 177 aa5.99□□□□□ -1.45
PAX6-238ENST00000638755 MIEN1Q9BRT3 115 aa5.98□□□□□ -1.45
PAX6-238ENST00000638755 C1orf195Q5TG92 126 aa5.97□□□□□ -1.45
PAX6-238ENST00000638755 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
PAX6-238ENST00000638755 TIMM17BO60830 172 aa5.96□□□□□ -1.46
PAX6-238ENST00000638755 SCGB1D1O95968 90 aa5.96□□□□□ -1.46
PAX6-238ENST00000638755 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
PAX6-238ENST00000638755 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.46
PAX6-238ENST00000638755 NDUFC2O95298 119 aa5.95□□□□□ -1.46
PAX6-238ENST00000638755 DDTP30046 118 aa5.95□□□□□ -1.46
PAX6-238ENST00000638755 SPANXB1Q9NS25 103 aaPredicted RBP5.95□□□□□ -1.46
PAX6-238ENST00000638755 TRBV10-2A0A0K0K1G8 114 aa5.94□□□□□ -1.46
PAX6-238ENST00000638755 JOSD1Q15040 202 aaPredicted RBP5.94□□□□□ -1.46
PAX6-238ENST00000638755 AKR1D1P51857 326 aa5.93□□□□□ -1.46
PAX6-238ENST00000638755 S100A7L2Q5SY68 101 aa5.93□□□□□ -1.46
PAX6-238ENST00000638755 SPANXDQ9BXN6 97 aa5.93□□□□□ -1.46
PAX6-238ENST00000638755 SPANXCQ9NY87 97 aa5.93□□□□□ -1.46
PAX6-238ENST00000638755 TMA7Q9Y2S6 64 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms