RNA–Protein interactions for RNA: ENST00000638618.1

GFAP-229, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-229ENST00000638618 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
GFAP-229ENST00000638618 Q6ZRX8 168 aa8.23□□□□□ -1.09
GFAP-229ENST00000638618 Q9BRP9 147 aa8.23□□□□□ -1.09
GFAP-229ENST00000638618 TRBV10-2A0A0K0K1G8 114 aa8.22□□□□□ -1.09
GFAP-229ENST00000638618 H0Y8G0 127 aa8.21□□□□□ -1.1
GFAP-229ENST00000638618 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
GFAP-229ENST00000638618 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
GFAP-229ENST00000638618 JOSD1Q15040 202 aaPredicted RBP8.2□□□□□ -1.1
GFAP-229ENST00000638618 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
GFAP-229ENST00000638618 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
GFAP-229ENST00000638618 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
GFAP-229ENST00000638618 S100A6P06703 90 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 MT1HP80294 61 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
GFAP-229ENST00000638618 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
GFAP-229ENST00000638618 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
GFAP-229ENST00000638618 PLNP26678 52 aa8.16□□□□□ -1.1
GFAP-229ENST00000638618 PMCHL2Q9BQD1 86 aa8.16□□□□□ -1.1
GFAP-229ENST00000638618 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
GFAP-229ENST00000638618 NDUFC2O95298 119 aa8.15□□□□□ -1.1
GFAP-229ENST00000638618 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
GFAP-229ENST00000638618 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
GFAP-229ENST00000638618 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 LEPROTO15243 131 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 DPM2O94777 84 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 S100A2P29034 98 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
GFAP-229ENST00000638618 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
GFAP-229ENST00000638618 IGKCP01834 107 aa8.13□□□□□ -1.11
GFAP-229ENST00000638618 C3orf79P0CE67 100 aa8.13□□□□□ -1.11
GFAP-229ENST00000638618 HIST3H2BBQ8N257 126 aa8.13□□□□□ -1.11
GFAP-229ENST00000638618 ST20-AS1Q8NBB2 130 aa8.13□□□□□ -1.11
GFAP-229ENST00000638618 KRTDAPP60985 99 aa8.12□□□□□ -1.11
GFAP-229ENST00000638618 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
GFAP-229ENST00000638618 J3QQQ9 107 aa8.11□□□□□ -1.11
GFAP-229ENST00000638618 NMUP48645 174 aa8.11□□□□□ -1.11
GFAP-229ENST00000638618 HERVK_113P61574 105 aa8.11□□□□□ -1.11
GFAP-229ENST00000638618 C20orf202A1L168 122 aa8.1□□□□□ -1.11
GFAP-229ENST00000638618 C9orf92A6NGG3 77 aa8.1□□□□□ -1.11
GFAP-229ENST00000638618 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
GFAP-229ENST00000638618 SLC25A34Q6PIV7 304 aa8.1□□□□□ -1.11
GFAP-229ENST00000638618 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
GFAP-229ENST00000638618 CBY1Q9Y3M2 126 aa8.1□□□□□ -1.11
GFAP-229ENST00000638618 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
GFAP-229ENST00000638618 SPRR1BP22528 89 aa8.09□□□□□ -1.11
GFAP-229ENST00000638618 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
GFAP-229ENST00000638618 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
GFAP-229ENST00000638618 E9PLD3 99 aa8.07□□□□□ -1.12
GFAP-229ENST00000638618 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
GFAP-229ENST00000638618 AKR1D1P51857 326 aa8.07□□□□□ -1.12
GFAP-229ENST00000638618 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
GFAP-229ENST00000638618 SOSTDC1Q6X4U4 206 aa8.06□□□□□ -1.12
GFAP-229ENST00000638618 LAMTOR3Q9UHA4 124 aa8.06□□□□□ -1.12
GFAP-229ENST00000638618 NPC2P61916 151 aa8.05□□□□□ -1.12
GFAP-229ENST00000638618 DHRS4-AS1Q9P1J3 65 aa8.05□□□□□ -1.12
GFAP-229ENST00000638618 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
GFAP-229ENST00000638618 CD164Q04900 197 aa8.03□□□□□ -1.12
GFAP-229ENST00000638618 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
GFAP-229ENST00000638618 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
GFAP-229ENST00000638618 M0R2T5 61 aa8.02□□□□□ -1.13
GFAP-229ENST00000638618 LITAFQ99732 161 aa8.01□□□□□ -1.13
GFAP-229ENST00000638618 ATOH7Q8N100 152 aa8□□□□□ -1.13
GFAP-229ENST00000638618 OR13C6PQ8NH95 151 aa8□□□□□ -1.13
GFAP-229ENST00000638618 PRO1933Q9H354 126 aa8□□□□□ -1.13
GFAP-229ENST00000638618 SPANXCQ9NY87 97 aa8□□□□□ -1.13
GFAP-229ENST00000638618 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
GFAP-229ENST00000638618 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
GFAP-229ENST00000638618 H7C2G1 150 aa7.98□□□□□ -1.13
GFAP-229ENST00000638618 TAL2Q16559 108 aa7.98□□□□□ -1.13
GFAP-229ENST00000638618 Q5XG85 94 aa7.98□□□□□ -1.13
GFAP-229ENST00000638618 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
GFAP-229ENST00000638618 COX7BP24311 80 aa7.97□□□□□ -1.13
GFAP-229ENST00000638618 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
GFAP-229ENST00000638618 RPL37P61927 97 aaKnown RBP7.97□□□□□ -1.13
GFAP-229ENST00000638618 Q1RN00 199 aa7.97□□□□□ -1.13
GFAP-229ENST00000638618 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
GFAP-229ENST00000638618 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
GFAP-229ENST00000638618 HSBP1L1C9JCN9 74 aa7.96□□□□□ -1.14
GFAP-229ENST00000638618 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
GFAP-229ENST00000638618 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
GFAP-229ENST00000638618 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
GFAP-229ENST00000638618 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
GFAP-229ENST00000638618 TIMM17BO60830 172 aa7.95□□□□□ -1.14
GFAP-229ENST00000638618 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
GFAP-229ENST00000638618 DEFB105AQ8NG35 78 aa7.95□□□□□ -1.14
GFAP-229ENST00000638618 C6orf99Q4VX62 202 aa7.94□□□□□ -1.14
GFAP-229ENST00000638618 LINC00518Q8N0U6 118 aa7.92□□□□□ -1.14
GFAP-229ENST00000638618 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
GFAP-229ENST00000638618 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
GFAP-229ENST00000638618 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
GFAP-229ENST00000638618 TRBV7-6A0A0J9YX20 115 aa7.89□□□□□ -1.15
GFAP-229ENST00000638618 IGLV5-48A0A075B6I7 105 aa7.87□□□□□ -1.15
GFAP-229ENST00000638618 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
GFAP-229ENST00000638618 TCL1BO95988 128 aa7.87□□□□□ -1.15
GFAP-229ENST00000638618 VAMP8Q9BV40 100 aa7.86□□□□□ -1.15
GFAP-229ENST00000638618 A0A0G2JQZ4 141 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms