RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 ZNF706Q9Y5V0 76 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-244ENST00000635659 IGHV3-64A0A075B6Q5 118 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 TRAV12-1A0A0B4J245 112 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 IGIPA6NJ69 53 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 TMEM141Q96I45 108 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 SCGB3A1Q96QR1 104 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 UBE2D4Q9Y2X8 147 aa4.1□□□□□ -1.75
SMARCA2-244ENST00000635659 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 CCL25O15444 150 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 XCL1P47992 114 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 Q6ZUT4 128 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 ZNF664Q8N3J9 261 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
SMARCA2-244ENST00000635659 A0A096LNI7 61 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 F8VRH5 84 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 PLNP26678 52 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 COX6A2Q02221 97 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 SPATA45Q537H7 98 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 LINC00483Q53H64 154 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 TIMM21Q9BVV7 248 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 SPANXA1Q9NS26 97 aa4.08□□□□□ -1.76
SMARCA2-244ENST00000635659 LRP2P98164 4655 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 DPM2O94777 84 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 IGKCP01834 107 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 SMAGPQ0VAQ4 97 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
SMARCA2-244ENST00000635659 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 IGLC3P0DOY3 106 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 DDTP30046 118 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 MRPS36P82909 103 aaKnown RBP4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 SS18Q15532 418 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 MIR7-3HGQ8N6C7 128 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 CARD19Q96LW7 228 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 AMELXQ99217 191 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 PMCHL2Q9BQD1 86 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 PRO1933Q9H354 126 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 CST9LQ9H4G1 147 aa4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
SMARCA2-244ENST00000635659 TRAV13-1A0A0B4J241 112 aa4.05□□□□□ -1.76
SMARCA2-244ENST00000635659 Q6ZRU5 148 aa4.05□□□□□ -1.76
SMARCA2-244ENST00000635659 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
SMARCA2-244ENST00000635659 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
SMARCA2-244ENST00000635659 UQCR10Q9UDW1 63 aa4.05□□□□□ -1.76
SMARCA2-244ENST00000635659 COX7A2LO14548 114 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 COX8AP10176 69 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 MP68P56378 58 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 CTAG1AP78358 180 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 FAM19A3Q7Z5A8 133 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 C2orf88Q9BSF0 95 aa4.04□□□□□ -1.76
SMARCA2-244ENST00000635659 C11orf86A6NJI1 115 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 LINC00587B1AMM8 73 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 DLEU1O43261 78 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 SLC25A34Q6PIV7 304 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 C5orf38Q86SI9 138 aa4.03□□□□□ -1.76
SMARCA2-244ENST00000635659 APOMO95445 188 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 UBE2D1P51668 147 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 SEC11AP67812 179 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 C14orf144Q96I85 54 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
SMARCA2-244ENST00000635659 IGKV2D-26A0A0A0MRZ7 120 aa4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 A0A1W2PNN7 141 aa4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 ST20-AS1Q8NBB2 130 aa4.01□□□□□ -1.77
SMARCA2-244ENST00000635659 HERVK_113P63121 156 aa4□□□□□ -1.77
SMARCA2-244ENST00000635659 TMEM170BQ5T4T1 132 aa4□□□□□ -1.77
SMARCA2-244ENST00000635659 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
SMARCA2-244ENST00000635659 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
SMARCA2-244ENST00000635659 H3BRM9 83 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 LEPROTO15243 131 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 C9orf116Q5BN46 136 aaPredicted RBP3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 HIGD1BQ9P298 99 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
SMARCA2-244ENST00000635659 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 J3QQQ9 107 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 M0R143 59 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 NDUFA1O15239 70 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 UNQ6190/PRO20217Q6UXQ8 127 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 SCGB1D4Q6XE38 83 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 LINC01600Q96MT4 127 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
SMARCA2-244ENST00000635659 ZNF815PA8K554 130 aa3.97□□□□□ -1.77
SMARCA2-244ENST00000635659 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms