RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CRCT1Q9UGL9 99 aa10.42□□□□□ -0.74
SMN1-211ENST00000625245 NMUP48645 174 aa10.41□□□□□ -0.74
SMN1-211ENST00000625245 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
SMN1-211ENST00000625245 PMCHL2Q9BQD1 86 aa10.41□□□□□ -0.74
SMN1-211ENST00000625245 DPM2O94777 84 aa10.4□□□□□ -0.74
SMN1-211ENST00000625245 HRCT1Q6UXD1 115 aa10.4□□□□□ -0.74
SMN1-211ENST00000625245 HINT1P49773 126 aaPredicted RBP10.39□□□□□ -0.75
SMN1-211ENST00000625245 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
SMN1-211ENST00000625245 FSIP2Q5CZC0 6907 aa10.39□□□□□ -0.75
SMN1-211ENST00000625245 EIF4EBP3O60516 100 aaPredicted RBP10.38□□□□□ -0.75
SMN1-211ENST00000625245 FABP4P15090 132 aa10.38□□□□□ -0.75
SMN1-211ENST00000625245 PCOTHQ58A44 107 aa10.38□□□□□ -0.75
SMN1-211ENST00000625245 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
SMN1-211ENST00000625245 SERF1AO75920 110 aa10.37□□□□□ -0.75
SMN1-211ENST00000625245 IGKCP01834 107 aa10.37□□□□□ -0.75
SMN1-211ENST00000625245 ADAMTSL4-AS1Q5T5F5 129 aa10.37□□□□□ -0.75
SMN1-211ENST00000625245 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
SMN1-211ENST00000625245 HSPB8Q9UJY1 196 aa10.36□□□□□ -0.75
SMN1-211ENST00000625245 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
SMN1-211ENST00000625245 C5orf52A6NGY3 159 aa10.35□□□□□ -0.75
SMN1-211ENST00000625245 TRGC2P03986 189 aa10.35□□□□□ -0.75
SMN1-211ENST00000625245 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
SMN1-211ENST00000625245 LINC00310P59036 64 aa10.34□□□□□ -0.75
SMN1-211ENST00000625245 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
SMN1-211ENST00000625245 CBY1Q9Y3M2 126 aa10.34□□□□□ -0.75
SMN1-211ENST00000625245 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
SMN1-211ENST00000625245 MT1HP80294 61 aa10.32□□□□□ -0.76
SMN1-211ENST00000625245 SLC25A34Q6PIV7 304 aa10.32□□□□□ -0.76
SMN1-211ENST00000625245 SPRR1BP22528 89 aa10.31□□□□□ -0.76
SMN1-211ENST00000625245 LAMTOR3Q9UHA4 124 aa10.31□□□□□ -0.76
SMN1-211ENST00000625245 DHRS4-AS1Q9P1J3 65 aa10.29□□□□□ -0.76
SMN1-211ENST00000625245 E9PLD3 99 aa10.27□□□□□ -0.77
SMN1-211ENST00000625245 CFC1BP0CG36 223 aa10.27□□□□□ -0.77
SMN1-211ENST00000625245 LINC00308Q8TCZ7 52 aa10.27□□□□□ -0.77
SMN1-211ENST00000625245 SPANXCQ9NY87 97 aa10.27□□□□□ -0.77
SMN1-211ENST00000625245 DEFB105AQ8NG35 78 aa10.26□□□□□ -0.77
SMN1-211ENST00000625245 TAL2Q16559 108 aa10.25□□□□□ -0.77
SMN1-211ENST00000625245 Q1RN00 199 aa10.25□□□□□ -0.77
SMN1-211ENST00000625245 H7C2G1 150 aa10.24□□□□□ -0.77
SMN1-211ENST00000625245 COX7BP24311 80 aa10.24□□□□□ -0.77
SMN1-211ENST00000625245 LITAFQ99732 161 aa10.23□□□□□ -0.77
SMN1-211ENST00000625245 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
SMN1-211ENST00000625245 PRO1933Q9H354 126 aa10.22□□□□□ -0.77
SMN1-211ENST00000625245 ELOF1P60002 83 aaKnown RBP10.21□□□□□ -0.77
SMN1-211ENST00000625245 CD164Q04900 197 aa10.21□□□□□ -0.77
SMN1-211ENST00000625245 C6orf99Q4VX62 202 aa10.21□□□□□ -0.77
SMN1-211ENST00000625245 TIMM17BO60830 172 aa10.2□□□□□ -0.78
SMN1-211ENST00000625245 TEX49A0A1B0GTD5 131 aa10.18□□□□□ -0.78
SMN1-211ENST00000625245 M0R2T5 61 aa10.18□□□□□ -0.78
SMN1-211ENST00000625245 LINC00518Q8N0U6 118 aa10.18□□□□□ -0.78
SMN1-211ENST00000625245 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
SMN1-211ENST00000625245 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
SMN1-211ENST00000625245 AKR1D1P51857 326 aa10.17□□□□□ -0.78
SMN1-211ENST00000625245 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
SMN1-211ENST00000625245 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
SMN1-211ENST00000625245 C1orf195Q5TG92 126 aa10.16□□□□□ -0.78
SMN1-211ENST00000625245 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
SMN1-211ENST00000625245 COX6B2Q6YFQ2 88 aa10.14□□□□□ -0.79
SMN1-211ENST00000625245 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
SMN1-211ENST00000625245 Q5XG85 94 aa10.13□□□□□ -0.79
SMN1-211ENST00000625245 SMIM29Q86T20 159 aa10.13□□□□□ -0.79
SMN1-211ENST00000625245 COLCA2A8K830 154 aa10.12□□□□□ -0.79
SMN1-211ENST00000625245 RPL37P61927 97 aaKnown RBP10.12□□□□□ -0.79
SMN1-211ENST00000625245 TRBV7-6A0A0J9YX20 115 aa10.1□□□□□ -0.79
SMN1-211ENST00000625245 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
SMN1-211ENST00000625245 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SMN1-211ENST00000625245 IGLV5-48A0A075B6I7 105 aa10.07□□□□□ -0.8
SMN1-211ENST00000625245 A6NDN8 102 aa10.07□□□□□ -0.8
SMN1-211ENST00000625245 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
SMN1-211ENST00000625245 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
SMN1-211ENST00000625245 TCL1BO95988 128 aa10.04□□□□□ -0.8
SMN1-211ENST00000625245 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
SMN1-211ENST00000625245 FLGP20930 4061 aaPredicted RBP10.02□□□□□ -0.8
SMN1-211ENST00000625245 HIST1H2BKO60814 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BJP06899 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BOP23527 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BBP33778 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BDP58876 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BCP62807 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.81
SMN1-211ENST00000625245 A4D1N5 150 aa10□□□□□ -0.81
SMN1-211ENST00000625245 C3orf79P0CE67 100 aa10□□□□□ -0.81
SMN1-211ENST00000625245 IFITM1P13164 125 aa10□□□□□ -0.81
SMN1-211ENST00000625245 SLC7A5P1Q8MH63 180 aa10□□□□□ -0.81
SMN1-211ENST00000625245 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
SMN1-211ENST00000625245 MUSTN1Q8IVN3 82 aa9.99□□□□□ -0.81
SMN1-211ENST00000625245 KRTDAPP60985 99 aa9.98□□□□□ -0.81
SMN1-211ENST00000625245 F8WEM9 126 aa9.97□□□□□ -0.81
SMN1-211ENST00000625245 Q6Q795 121 aa9.97□□□□□ -0.81
SMN1-211ENST00000625245 ANKRD39Q53RE8 183 aa9.96□□□□□ -0.82
SMN1-211ENST00000625245 Q6ZVH6 145 aa9.96□□□□□ -0.82
SMN1-211ENST00000625245 PCP2Q8IVA1 136 aa9.96□□□□□ -0.82
SMN1-211ENST00000625245 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
SMN1-211ENST00000625245 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
SMN1-211ENST00000625245 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
SMN1-211ENST00000625245 C20orf202A1L168 122 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms